FFCP PHASE2:Hg19::chr4:10041883..10041910,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:56606 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:13446 |TSScla...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=56606 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=13446 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9NRM0 | ||
|association_with_transcript=-11bp_to_ENST00000309065,NM_001001290,uc003gmd.2,uc003gme.1_5end | |association_with_transcript=-11bp_to_ENST00000309065,NM_001001290,uc003gmd.2,uc003gme.1_5end | ||
|cluster_id=chr4:10041883..10041910,- | |cluster_id=chr4:10041883..10041910,- |
Latest revision as of 01:34, 20 September 2015
Short description: | p4@SLC2A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC2A9_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -11bp_to_ENST00000309065, NM_001001290, uc003gmd.2, uc003gme.1_5end |
EntrezGene: | SLC2A9 |
HGNC: | 13446 |
UniProt: | Q9NRM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@SLC2A9 |
---|
0
20
40
60
80
100
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 8.99e-23 | 3 |
internal male genitalia | 8.99e-23 | 3 |
seminal vesicle | 7.37e-18 | 1 |
seminal fluid secreting gland | 7.37e-18 | 1 |
vas deferens | 1.44e-17 | 1 |
spermatic cord | 1.44e-17 | 1 |
duct of male reproductive system | 2.39e-17 | 4 |
umbilical cord | 7.83e-16 | 10 |
blastocyst | 7.83e-16 | 10 |
blastula | 7.83e-16 | 10 |
Showing 1 to 10 of 27 entries
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.26e-18 | 1 |
cutaneous T cell lymphoma | 5.26e-18 | 1 |
mycosis fungoides | 5.26e-18 | 1 |
lymphoma | 1.33e-07 | 10 |
Showing 1 to 4 of 4 entries