FFCP PHASE2:Hg19::chr6:123957986..123957997,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:10345 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:12261 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=10345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=12261 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E9PEX4,Q13061,F5H5I1,Q8IVK2,Q6NSB8 | ||
|association_with_transcript=-44bp_to_ENST00000333613,ENST00000398178,ENST00000543022,uc003pzj.1,uc003pzk.1,uc003pzl.1,uc010ken.2,uc010keo.1_5end | |association_with_transcript=-44bp_to_ENST00000333613,ENST00000398178,ENST00000543022,uc003pzj.1,uc003pzk.1,uc003pzl.1,uc010ken.2,uc010keo.1_5end | ||
|cluster_id=chr6:123957986..123957997,- | |cluster_id=chr6:123957986..123957997,- |
Latest revision as of 06:16, 20 September 2015
Short description: | p5@TRDN |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRDN_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | -44bp_to_ENST00000333613, ENST00000398178, ENST00000543022, uc003pzj.1, uc003pzk.1, uc003pzl.1, uc010ken.2, uc010keo.1_5end |
EntrezGene: | TRDN |
HGNC: | 12261 |
UniProt: | E9PEX4Q13061F5H5I1Q8IVK2Q6NSB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@TRDN |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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muscle structure | 3.16e-18 | 2 |
muscle organ | 3.16e-18 | 2 |
throat | 8.08e-18 | 2 |
tongue | 1.15e-12 | 3 |
gustatory system | 1.15e-12 | 3 |
future tongue | 1.15e-12 | 3 |
cardiac chamber | 4.72e-12 | 3 |
adult organism | 6.44e-12 | 114 |
chest muscle | 5.31e-10 | 1 |
respiratory system muscle | 5.31e-10 | 1 |
Showing 1 to 10 of 67 entries