FFCP PHASE1:Hg19::chr11:104034662..104034710,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=80310 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=30620 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9GZP0 | ||
|association_with_transcript=124bp_to_ENST00000393158_5end | |association_with_transcript=124bp_to_ENST00000393158_5end | ||
|cluster_id=chr11:104034662..104034710,- | |cluster_id=chr11:104034662..104034710,- |
Latest revision as of 19:54, 24 September 2015
Short description: | p7@PDGFD |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PDGFD_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 124bp_to_ENST00000393158_5end |
EntrezGene: | PDGFD |
HGNC: | 30620 |
UniProt: | Q9GZP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p7@PDGFD |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.67e-21 | 15 |
adipocyte of omentum tissue | 6.22e-21 | 3 |
adipocyte of breast | 4.89e-15 | 2 |
synovial cell | 4.38e-10 | 3 |
cardiac muscle cell | 6.28e-10 | 3 |
cardiac muscle myoblast | 6.28e-10 | 3 |
perirenal adipocyte cell | 1.77e-08 | 1 |
androgen binding protein secreting cell | 2.04e-08 | 1 |
seminiferous tubule epithelial cell | 2.04e-08 | 1 |
Sertoli cell | 2.04e-08 | 1 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
cavity lining | 7.81e-20 | 12 |
serous membrane | 7.81e-20 | 12 |
omentum | 3.18e-18 | 6 |
peritoneum | 3.18e-18 | 6 |
abdominal cavity | 3.18e-18 | 6 |
visceral peritoneum | 3.18e-18 | 6 |
stratified squamous epithelium | 4.38e-10 | 3 |
layer of synovial tissue | 4.38e-10 | 3 |
synovial joint | 4.38e-10 | 3 |
synovial membrane of synovial joint | 4.38e-10 | 3 |
Showing 1 to 10 of 21 entries
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.65e-08 | 1 |
extraosseous chondrosarcoma | 1.65e-08 | 1 |
myxoid chondrosarcoma | 1.65e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 1.65e-08 | 1 |
Showing 1 to 4 of 4 entries