FFCP PHASE2:Hg19::chr17:46178219..46178262,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:10951 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:1551 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=10951 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1551 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9JWS9 | ||
|association_with_transcript=-275bp_to_ENST00000444685_5end | |association_with_transcript=-275bp_to_ENST00000444685_5end | ||
|cluster_id=chr17:46178219..46178262,- | |cluster_id=chr17:46178219..46178262,- |
Latest revision as of 05:24, 25 September 2015
Short description: | p5@CBX1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CBX1_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -275bp_to_ENST00000444685_5end |
EntrezGene: | CBX1 |
HGNC: | 1551 |
UniProt: | C9JWS9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@CBX1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neural cell | 6.60e-13 | 25 |
neuron associated cell | 2.37e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 2.37e-10 | 17 |
glial cell (sensu Vertebrata) | 9.47e-10 | 15 |
glial cell | 9.47e-10 | 15 |
glioblast | 9.47e-10 | 15 |
glioblast (sensu Vertebrata) | 9.47e-10 | 15 |
mesothelial cell | 8.34e-08 | 19 |
neurectodermal cell | 1.43e-07 | 59 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
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nervous system | 5.10e-11 | 89 |
central nervous system | 6.39e-11 | 81 |
brain | 1.01e-08 | 68 |
future brain | 1.01e-08 | 68 |
cerebral cortex | 7.80e-07 | 25 |
pallium | 7.80e-07 | 25 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
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nervous system cancer | 1.18e-09 | 11 |
Showing 1 to 1 of 1 entries