Swissregulon:PAX4.p1: Difference between revisions
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{{SwissregulonMotif | {{SwissregulonMotif | ||
|associated_transcription_factors=0.907:5078:PAX4:paired box 4:PAX:NM_006193: | |||
|datasource=http://www.swissregulon.unibas.ch/ | |datasource=http://www.swissregulon.unibas.ch/ | ||
|gostat_on_mara_hg19=GO:0005515!protein binding!0.000241890959765694!401138;8825;1111;56146;3356;5511;22941;29851;1837;4753;7541;1121;3567;10951;54674;9211;460;11127;6092;4897;6733;23767;4008;785;80128;6925;529;26280;51176;152330;773;729230;56143;22999;4133;5290;9643;56106$GO:0016337!cell-cell adhesion!0.00218481409602999!56143;56146;460;56106;152330;6092;4897$GO:0044425!membrane part!0.00218481409602999!6328;401138;8825;84502;56146;3356;79796;22941;29851;1837;114789;460;54674;222553;6092;4897;78987;23767;54407;51465;785;529;9498;26280;9976;773;729230;56143;22999;57205;56106$GO:0005886!plasma membrane!0.00218481409602999!23767;6328;54407;401138;8825;785;56146;529;3356;152330;22941;29851;773;9976;1837;22999;729230;56143;56106;4897$GO:0044459!plasma membrane part!0.00218481409602999!23767;6328;401138;8825;785;56146;3356;22941;773;9976;1837;29851;729230;56143;22999;4897$GO:0022610!biological adhesion!0.00325441349556944!56143;4753;23767;401138;56146;460;56106;152330;6092;4897$GO:0007155!cell adhesion!0.00325441349556944!56143;4753;23767;401138;56146;460;56106;152330;6092;4897$GO:0044464!cell part!0.00340667727914929!55297;6328;401138;8825;1111;84502;8568;56146;3356;440275;79796;5511;22941;29851;1837;7541;51427;114789;10951;54674;460;85291;11127;222553;6092;5144;4897;6733;78987;23767;51465;54407;4008;80222;200916;785;80128;6925;9498;529;26280;51176;152330;3227;773;9976;22999;56143;729230;9406;10194;28951;4133;79868;5290;9643;57205;56898;7592;56106;9716$GO:0007413!axonal fasciculation!0.00398321735006457!152330;4897$GO:0007269!neurotransmitter secretion!0.00673954752466609!22999;3356;8825$GO:0007158!neuron adhesion!0.00682564658314578!460;152330$GO:0007399!nervous system development!0.0080137769626116!56143;56146;26280;9211;51176;152330;6092;4897$GO:0007417!central nervous system development!0.00842340452284674!26280;51176;152330;6092;4897$GO:0016020!membrane!0.00842340452284674!55297;6328;401138;8825;84502;56146;3356;79796;22941;29851;1837;114789;54674;460;222553;6092;5144;4897;78987;23767;51465;54407;785;9498;529;26280;152330;773;9976;729230;56143;22999;57205;56106$GO:0045055!regulated secretory pathway!0.0104508125592233!22999;3356;8825$GO:0008038!neuron recognition!0.0122248138304563!152330;4897$GO:0007268!synaptic transmission!0.0170407695073456!22999;3356;152330;8825;1837$GO:0003001!generation of a signal involved in cell-cell signaling!0.0198469731165043!22999;3356;8825$GO:0065007!biological regulation!0.0217667397499303!51465;8825;1111;785;6925;51176;3356;152330;440275;3227;5511;773;23034;22999;729230;7541;10194;28951;4133;51427;9643;3567;1121;7592;6092;4897$GO:0043269!regulation of ion transport!0.0228280365569932!3356;785$GO:0001505!regulation of neurotransmitter levels!0.0228280365569932!22999;3356;8825$GO:0019226!transmission of nerve impulse!0.0228280365569932!22999;3356;152330;8825;1837$GO:0048489!synaptic vesicle transport!0.0228280365569932!22999;8825$GO:0043005!neuron projection!0.0228280365569932!3356;152330;4897$GO:0042475!odontogenesis of dentine-containing teeth!0.0240671365152331!51176;401138$GO:0048856!anatomical structure development!0.024943661394222!56143;401138;9643;56146;26280;3356;51176;9211;152330;6092;3227;4897$GO:0007156!homophilic cell adhesion!0.0280481434922279!56143;56146;56106;6092$GO:0001656!metanephros development!0.0311249050447612!6092;3227$GO:0042476!odontogenesis!0.0311249050447612!51176;401138$GO:0008380!RNA splicing!0.0311249050447612!6733;9406;9716;5511$GO:0016021!integral to membrane!0.0311249050447612!78987;23767;6328;51465;54407;84502;9498;56146;26280;3356;79796;29851;773;9976;729230;56143;57205;114789;460;54674;56106;222553;6092;4897$GO:0045664!regulation of neuron differentiation!0.0311249050447612!152330;4897$GO:0050770!regulation of axonogenesis!0.0311249050447612!6092;4897$GO:0009653!anatomical structure morphogenesis!0.0311249050447612!401138;9643;3356;51176;152330;3227;6092;4897$GO:0017137!Rab GTPase binding!0.0311249050447612!22999;1121$GO:0031224!intrinsic to membrane!0.0311249050447612!78987;23767;6328;51465;54407;84502;9498;56146;26280;3356;79796;29851;773;9976;729230;56143;57205;114789;460;54674;56106;222553;6092;4897$GO:0005887!integral to plasma membrane!0.0311249050447612!56143;729230;23767;6328;56146;3356;4897;9976;29851$GO:0048731!system development!0.0311249050447612!56143;401138;56146;26280;51176;9211;152330;3227;6092;4897$GO:0016043!cellular component organization and biogenesis!0.0311249050447612!6733;22999;91574;4133;9643;8825;8568;1121;10951;3356;152330;440275;11127;6092;4897$GO:0007409!axonogenesis!0.0311249050447612!152330;6092;4897$GO:0031226!intrinsic to plasma membrane!0.0311249050447612!56143;729230;23767;6328;56146;3356;4897;9976;29851$GO:0051246!regulation of protein metabolic process!0.0311249050447612!23034;3567;51465;4133;440275$GO:0006812!cation transport!0.0311249050447612!529;6328;54407;3356;785;773;57205$GO:0030054!cell junction!0.0311249050447612!22999;401138;8825;22941;1837$GO:0044428!nuclear part!0.0311249050447612!6925;8568;10951;51176;9716;5511;9643;1111$GO:0048667!neuron morphogenesis during differentiation!0.0311249050447612!152330;6092;4897$GO:0048812!neurite morphogenesis!0.0311249050447612!152330;6092;4897$GO:0004632!phosphopantothenate--cysteine ligase activity!0.0311249050447612!79717$GO:0008995!ribonuclease E activity!0.0311249050447612!5511$GO:0051967!negative regulation of synaptic transmission, glutamatergic!0.0311249050447612!3356$GO:0004577!N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity!0.0311249050447612!79868$GO:0021542!dentate gyrus development!0.0311249050447612!51176$GO:0031727!CCR2 chemokine receptor binding!0.0311249050447612!729230$GO:0048020!CCR chemokine receptor binding!0.0311249050447612!729230$GO:0007208!serotonin receptor, phospholipase C activating pathway!0.0311249050447612!3356$GO:0045907!positive regulation of vasoconstriction!0.0311249050447612!3356$GO:0007267!cell-cell signaling!0.0311249050447612!22999;3356;152330;3227;8825;1837$GO:0032502!developmental process!0.0331604563219739!6733;56143;10194;401138;9643;56146;26280;3356;51176;9211;152330;6092;3227;4897;773$GO:0000904!cellular morphogenesis during differentiation!0.0331604563219739!152330;6092;4897$GO:0000122!negative regulation of transcription from RNA polymerase II promoter!0.0333477497964319!6925;7541;51176$GO:0007275!multicellular organismal development!0.034166120017434!56143;10194;401138;56146;26280;3356;51176;9211;152330;3227;6092;4897$GO:0006397!mRNA processing!0.0342290610441212!6733;9406;9716;5511$GO:0001822!kidney development!0.0343989338813647!6092;3227$GO:0005891!voltage-gated calcium channel complex!0.0357488570006878!785;773$GO:0031175!neurite development!0.0359974250212379!152330;6092;4897$GO:0008037!cell recognition!0.0359974250212379!152330;4897$GO:0050767!regulation of neurogenesis!0.0359974250212379!6092;4897$GO:0005509!calcium ion binding!0.0368988507521289!56143;4753;78987;56146;114789;56106;1837;785;773$GO:0031981!nuclear lumen!0.0368988507521289!6925;8568;10951;51176;5511;9643$GO:0007420!brain development!0.0368988507521289!51176;152330;6092$GO:0001655!urogenital system development!0.0375900964135784!6092;3227$GO:0051179!localization!0.0384836505762047!55297;6328;54407;8825;785;9498;529;3356;152330;773;22999;57205;1121;114789;460;11127;222553;4897$GO:0009986!cell surface!0.0384836505762047!6092;4897;29851$GO:0043233!organelle lumen!0.0384836505762047!6925;8568;10951;51176;80222;5511;9643$GO:0031974!membrane-enclosed lumen!0.0384836505762047!6925;8568;10951;51176;80222;5511;9643$GO:0032501!multicellular organismal process!0.0384836505762047!22999;56143;10194;401138;8825;56146;1121;26280;9211;3356;51176;152330;6092;3227;4897;1837$GO:0048666!neuron development!0.0384836505762047!152330;6092;4897$GO:0042995!cell projection!0.0384836505762047!3356;152330;4897;773$GO:0014059!regulation of dopamine secretion!0.0384836505762047!3356$GO:0014046!dopamine secretion!0.0384836505762047!3356$GO:0004910!interleukin-1, Type II, blocking receptor activity!0.0384836505762047!26280$GO:0030684!preribosome!0.0384836505762047!8568$GO:0019968!interleukin-1, Type II, blocking binding!0.0384836505762047!26280$GO:0030685!nucleolar preribosome!0.0384836505762047!8568$GO:0030160!GKAP/Homer scaffold activity!0.0384836505762047!22941$GO:0043266!regulation of potassium ion transport!0.0384836505762047!3356$GO:0050805!negative regulation of synaptic transmission!0.0384836505762047!3356$GO:0043267!negative regulation of potassium ion transport!0.0384836505762047!3356$GO:0045162!clustering of voltage-gated sodium channels!0.0384836505762047!4897$GO:0030688!nucleolar preribosome, small subunit precursor!0.0384836505762047!8568$GO:0051966!regulation of synaptic transmission, glutamatergic!0.0384836505762047!3356$GO:0007210!serotonin receptor signaling pathway!0.0384836505762047!3356$GO:0044456!synapse part!0.0419155044994579!22999;8825;22941$GO:0006396!RNA processing!0.0419861706667148!6733;9406;8568;9716;5511$GO:0032991!macromolecular complex!0.0430862338633689!6328;4133;4008;5290;200916;785;6925;8568;529;1121;51176;9716;440275;11127;5511;773$GO:0009897!external side of plasma membrane!0.0430862338633689!4897;29851$GO:0046872!metal ion binding!0.0446220088066332!6733;78987;6328;54407;4008;785;80128;56146;529;5511;773;1837;4753;56143;22999;9406;7541;10194;51427;57205;114789;7592;56106;5144$GO:0030258!lipid modification!0.0455658476875477!79868;5290$GO:0016071!mRNA metabolic process!0.0477049724478425!6733;9406;9716;5511$GO:0050789!regulation of biological process!0.0480509748668619!51465;8825;1111;785;6925;3356;51176;152330;440275;3227;5511;22999;23034;7541;10194;4133;51427;9643;3567;7592;6092;4897$GO:0005137!interleukin-5 receptor binding!0.0480509748668619!3567$GO:0008046!axon guidance receptor activity!0.0480509748668619!6092$GO:0005084!Rab escort protein activity!0.0480509748668619!1121$GO:0045666!positive regulation of neuron differentiation!0.0480509748668619!4897$GO:0051925!regulation of calcium ion transport via voltage-gated calcium channel!0.0480509748668619!785$GO:0005968!Rab-protein geranylgeranyltransferase complex!0.0480509748668619!1121$GO:0018348!protein amino acid geranylgeranylation!0.0480509748668619!1121$GO:0051970!negative regulation of transmission of nerve impulse!0.0480509748668619!3356$GO:0003858!3-hydroxybutyrate dehydrogenase activity!0.0480509748668619!56898$GO:0021766!hippocampus development!0.0480509748668619!51176$GO:0048518!positive regulation of biological process!0.0480509748668619!6925;23034;3567;51176;3356;6092;4897 | |||
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| |||
|name=PAX4.p1 | |name=PAX4.p1 | ||
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}} | }} |
Revision as of 19:30, 16 April 2012
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Motif Activities (MARA) on Phase1 data
hg19
Chart |
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Sample of clicked point: |
mm9
Z-value table | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Chart |
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Sample of clicked point: |
GOStat results on predicted Motif target
hg19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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