Personal tools

FFCP PHASE1:Mm9::chr14:52604501..52604531,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr14:52604501..52604531,+
|short_description=p2@Arhgef40
|description=CAGE_peak_2_at_Arhgef40_5end
|association_with_transcript=0bp_to_ENSMUST00000093813,ENSMUST00000100639,NM_001145921,NM_001145922,NM_198249,uc007tno.2,uc007tnp.2,uc007tnq.2,uc007tnr.2,uc007tns.2,uc007tnt.2_5end
|EntrezGene=268739
|EntrezGene=268739
|HGNC=
|HGNC=
|UniProt=Q3UPH7
|UniProt=Q3UPH7
|association_with_transcript=0bp_to_ENSMUST00000093813,ENSMUST00000100639,NM_001145921,NM_001145922,NM_198249,uc007tno.2,uc007tnp.2,uc007tnq.2,uc007tnr.2,uc007tns.2,uc007tnt.2_5end
|description=CAGE_peak_2_at_Arhgef40_5end
|id=chr14:52604501..52604531,+
|ontology_enrichment_disease=
|phase1_expression=8.64803774365887,0,0,0,0.500895729946347,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,1.39912375625629,0,0.137114433605739,0,1.7008658030214,1.09220046320974,1.04479915655574,0,0,0,0,0,0.190023419456374,0,0.443461021310609,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,6.04304726282771,6.2853697356099,3.85448179539531,26.6013057078333,7.19483016055474,8.5677611266444,8.55491555926847,10.0790223570261,11.5002051491977,0,0,0,12.6057123657614,7.16333599846892,9.28209766099396,4.24864567805155,2.64495489636016,6.33831403506179,23.7191172448392,17.7858959222228,1.3498495759221,0,1.4209602298922,12.2836045312546,6.53171119046643,5.49554945234932,4.05017814995072,4.41682418837902,7.42692559449889,5.07997644188711,3.30725157880376,4.2172007248024,3.67687514644008,2.20231761998777,3.44755812830007,3.84016333140609,5.40733779693795,6.22115976496386,5.73004707612436,3.62937898701795,2.25105044012672,3.0559649555362,7.95497180778903,7.97281412474976,7.26957838718672,3.10477392666055,4.53429360640713,3.18850937571846,1.72084775396277,0.679971333707751,2.69851595818909,0,0.448026887097336,0.983110940922263,5.45377032249785,9.61208217030615,12.7202246823722,8.16891834704747,15.3991772897181,50.9610479413291,85.3280043783997,0.649473123033642,2.78695852022608,0.505524445014783,0.45673551887624,0.776813650941515,2.3750742250372,8.84775166507293,2.74018930480927,3.92046345335299,2.86373017049983,6.11461277105665,3.64433114856059,2.22475470960936,3.61498392299779,0.884610551949874,8.8971767471075,3.09178125844551,2.90925151881133,0,1.46390398505774,3.14170060220183,0.510914110417183,0.838705871541442,0.599902730993408,0.127070227073065,1.19832511523858,1.37250180845588,5.78010019719176,1.73824320192276,1.27857728665165,1.87009240103604,3.24482526135515,17.5163705822544,2.48813941220186,2.77995034277042,1.47309299120532,6.37590170517248,6.43725892413724,5.94205028357652,7.08312643827861,8.23241639731067,6.27757229395764,6.65282244374075,1.81092359517311,13.3652155618362,16.4522289746003,16.7153567955751,13.3709396780821,10.0097009721215,16.0195996600197,10.7006710932131,9.15557627365069,0,0.51469581422943,0.284163499395593,6.21377317606506,6.56672967947069,4.32148947506436,8.52281048106757,5.90292695242211,4.9365476123961,5.34828072925938,6.17028823219124,6.53885917256149,7.07607354627966,7.55170334763838,6.08016071593918,4.38599962275997,5.92785311285837,4.16039898157152,1.05144974282064,6.68879980465349,0.330418782983798,0.264450566663544,8.31824177087412,9.52170354627798,7.98978260196979,6.05050573870028,4.00280478920767,3.61428689613862,1.89811624617805,2.14108641141214,2.5133520880027,2.98434708061726,3.11942539390592,3.59527763461689,0.864552199498777,1.7922714592893,5.87970492954553,5.48392860526698,3.38123207019241,5.29493452397817,4.07300223052014,9.32806404541237,6.00747102680444,2.36176236767363,1.72698600625512,2.59134044235781,0.296452627087149,3.17005700860579,2.55526693647164,1.79889689907883,2.02860121388503,2.17059443777175,0.763877555344259,0.863088412352432,1.78348749452539,1.09824565275233,1.43768206527355,1.48856379067401,2.49630138491648,1.01031551178845,1.25578189465339,0,0.739012760666419,7.39016505904891,8.14824882210129,6.45031325945715,8.91822943496308,7.20276906999808,6.42717830392237,11.7080188714679,7.25121662888479,8.41565820665345,12.9158362612565,2.78567635016755,5.00786447411097,4.33947175744535,0,0,1.96705709207614,2.75936746304733,2.24770825982909,2.22702204525186,3.60656879828686,3.7870639080656,11.9893123378178,12.4940398174924,13.1408272617007,15.2940030689633,18.2694912747563,19.8153571552183,17.8116708736954,11.6902343164525,17.392662229647,3.53453448063988,3.97432238583152,13.5329858787114,18.4062264069541,8.08353602565424,0,4.12727081463468,3.32555912661226,2.45186603682668,2.95301892880773,2.15204603560749,4.65170927702798,5.45300594216258,4.9909632973861,1.8962205476149,1.05418608574999,1.03135543248187,1.36175842301515,5.40183282093931,8.02023839453078,5.14408884075822,6.56158864476412,6.77801506887868,8.06290200950393,9.13394847343798,0.704015124191131,0.847328283455281,0.882113592219848,5.44124634706884,7.91175690809937,6.09160541774374,4.05865969610664,1.31312719796049,1.45740418314925,1.11255181206306,0.341741761595705,5.57244543500701,3.51869602002452,0.565105371014073,1.36694227721025,1.14389086603261,1.5298058699447,1.81936888020755,1.65839968565309,1.90934123603023,8.54107182669065,10.1659733563424,7.02034715341708,6.27264888043406,5.02233896616208,7.41753905116514,7.02554373665355,2.87931536182433,1.42576470620972,2.4853572523477,0,8.97099276263873,10.2584264083401,14.7782903141476,10.4619457016962,12.3337971608268,13.2613679669702,9.24451132392046,5.45268591013696,1.20792060413003,1.15212002503146,1.26404448251271,6.28448167399509,5.34096977257102,2.33857481360031,3.75956060901711,2.58285761215644,1.68273629327956,2.06765338044408,1.51449674922221,0.990688486514998,0.604957110821043,0.38983152295901,0.673482891482306,1.05189211963412,2.0405734525369,0.887943813496259,1.16628013592318,1.17519231454855,3.67060228661162,4.31669693537719,3.47988086107804,3.21552568618599,1.00314420807073,2.25900737046827,0.460325236507177,0.572895513439397,1.20297227640581,0.685082519770642,0,1.35004500046361,0.45032120322422,0.906284817968409,0,4.8780053364563,13.9658705690361,8.19521307619844,9.48116196566347,4.82110274044359,4.59608771125035,6.22290837844523,6.38708677440572,2.88827288632634,6.06473308233114,5.0695859978048,6.03604292435444,7.77224512000024,6.78666615491614,8.73019128125322,5.71552429539688,7.76424983830532,8.87382414133043,9.06588981767275,8.09594060739185,4.4573002810104,7.80893547101085,6.43777712857767,4.94177816549917,7.15231291156513,6.59993941555077,4.75612729469209,5.26139422875686,7.74083448921412,8.41713407486608,8.18581625056802,10.2444661670586,9.00308294973317,8.52152626522813,8.8737041051325,8.99318080576605,6.31615342802603,10.5286816483666,9.56441660344217,8.82365676478062,3.94175320554716
|phase1_expression=8.64803774365887,0,0,0,0.500895729946347,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,1.39912375625629,0,0.137114433605739,0,1.7008658030214,1.09220046320974,1.04479915655574,0,0,0,0,0,0.190023419456374,0,0.443461021310609,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,6.04304726282771,6.2853697356099,3.85448179539531,26.6013057078333,7.19483016055474,8.5677611266444,8.55491555926847,10.0790223570261,11.5002051491977,0,0,0,12.6057123657614,7.16333599846892,9.28209766099396,4.24864567805155,2.64495489636016,6.33831403506179,23.7191172448392,17.7858959222228,1.3498495759221,0,1.4209602298922,12.2836045312546,6.53171119046643,5.49554945234932,4.05017814995072,4.41682418837902,7.42692559449889,5.07997644188711,3.30725157880376,4.2172007248024,3.67687514644008,2.20231761998777,3.44755812830007,3.84016333140609,5.40733779693795,6.22115976496386,5.73004707612436,3.62937898701795,2.25105044012672,3.0559649555362,7.95497180778903,7.97281412474976,7.26957838718672,3.10477392666055,4.53429360640713,3.18850937571846,1.72084775396277,0.679971333707751,2.69851595818909,0,0.448026887097336,0.983110940922263,5.45377032249785,9.61208217030615,12.7202246823722,8.16891834704747,15.3991772897181,50.9610479413291,85.3280043783997,0.649473123033642,2.78695852022608,0.505524445014783,0.45673551887624,0.776813650941515,2.3750742250372,8.84775166507293,2.74018930480927,3.92046345335299,2.86373017049983,6.11461277105665,3.64433114856059,2.22475470960936,3.61498392299779,0.884610551949874,8.8971767471075,3.09178125844551,2.90925151881133,0,1.46390398505774,3.14170060220183,0.510914110417183,0.838705871541442,0.599902730993408,0.127070227073065,1.19832511523858,1.37250180845588,5.78010019719176,1.73824320192276,1.27857728665165,1.87009240103604,3.24482526135515,17.5163705822544,2.48813941220186,2.77995034277042,1.47309299120532,6.37590170517248,6.43725892413724,5.94205028357652,7.08312643827861,8.23241639731067,6.27757229395764,6.65282244374075,1.81092359517311,13.3652155618362,16.4522289746003,16.7153567955751,13.3709396780821,10.0097009721215,16.0195996600197,10.7006710932131,9.15557627365069,0,0.51469581422943,0.284163499395593,6.21377317606506,6.56672967947069,4.32148947506436,8.52281048106757,5.90292695242211,4.9365476123961,5.34828072925938,6.17028823219124,6.53885917256149,7.07607354627966,7.55170334763838,6.08016071593918,4.38599962275997,5.92785311285837,4.16039898157152,1.05144974282064,6.68879980465349,0.330418782983798,0.264450566663544,8.31824177087412,9.52170354627798,7.98978260196979,6.05050573870028,4.00280478920767,3.61428689613862,1.89811624617805,2.14108641141214,2.5133520880027,2.98434708061726,3.11942539390592,3.59527763461689,0.864552199498777,1.7922714592893,5.87970492954553,5.48392860526698,3.38123207019241,5.29493452397817,4.07300223052014,9.32806404541237,6.00747102680444,2.36176236767363,1.72698600625512,2.59134044235781,0.296452627087149,3.17005700860579,2.55526693647164,1.79889689907883,2.02860121388503,2.17059443777175,0.763877555344259,0.863088412352432,1.78348749452539,1.09824565275233,1.43768206527355,1.48856379067401,2.49630138491648,1.01031551178845,1.25578189465339,0,0.739012760666419,7.39016505904891,8.14824882210129,6.45031325945715,8.91822943496308,7.20276906999808,6.42717830392237,11.7080188714679,7.25121662888479,8.41565820665345,12.9158362612565,2.78567635016755,5.00786447411097,4.33947175744535,0,0,1.96705709207614,2.75936746304733,2.24770825982909,2.22702204525186,3.60656879828686,3.7870639080656,11.9893123378178,12.4940398174924,13.1408272617007,15.2940030689633,18.2694912747563,19.8153571552183,17.8116708736954,11.6902343164525,17.392662229647,3.53453448063988,3.97432238583152,13.5329858787114,18.4062264069541,8.08353602565424,0,4.12727081463468,3.32555912661226,2.45186603682668,2.95301892880773,2.15204603560749,4.65170927702798,5.45300594216258,4.9909632973861,1.8962205476149,1.05418608574999,1.03135543248187,1.36175842301515,5.40183282093931,8.02023839453078,5.14408884075822,6.56158864476412,6.77801506887868,8.06290200950393,9.13394847343798,0.704015124191131,0.847328283455281,0.882113592219848,5.44124634706884,7.91175690809937,6.09160541774374,4.05865969610664,1.31312719796049,1.45740418314925,1.11255181206306,0.341741761595705,5.57244543500701,3.51869602002452,0.565105371014073,1.36694227721025,1.14389086603261,1.5298058699447,1.81936888020755,1.65839968565309,1.90934123603023,8.54107182669065,10.1659733563424,7.02034715341708,6.27264888043406,5.02233896616208,7.41753905116514,7.02554373665355,2.87931536182433,1.42576470620972,2.4853572523477,0,8.97099276263873,10.2584264083401,14.7782903141476,10.4619457016962,12.3337971608268,13.2613679669702,9.24451132392046,5.45268591013696,1.20792060413003,1.15212002503146,1.26404448251271,6.28448167399509,5.34096977257102,2.33857481360031,3.75956060901711,2.58285761215644,1.68273629327956,2.06765338044408,1.51449674922221,0.990688486514998,0.604957110821043,0.38983152295901,0.673482891482306,1.05189211963412,2.0405734525369,0.887943813496259,1.16628013592318,1.17519231454855,3.67060228661162,4.31669693537719,3.47988086107804,3.21552568618599,1.00314420807073,2.25900737046827,0.460325236507177,0.572895513439397,1.20297227640581,0.685082519770642,0,1.35004500046361,0.45032120322422,0.906284817968409,0,4.8780053364563,13.9658705690361,8.19521307619844,9.48116196566347,4.82110274044359,4.59608771125035,6.22290837844523,6.38708677440572,2.88827288632634,6.06473308233114,5.0695859978048,6.03604292435444,7.77224512000024,6.78666615491614,8.73019128125322,5.71552429539688,7.76424983830532,8.87382414133043,9.06588981767275,8.09594060739185,4.4573002810104,7.80893547101085,6.43777712857767,4.94177816549917,7.15231291156513,6.59993941555077,4.75612729469209,5.26139422875686,7.74083448921412,8.41713407486608,8.18581625056802,10.2444661670586,9.00308294973317,8.52152626522813,8.8737041051325,8.99318080576605,6.31615342802603,10.5286816483666,9.56441660344217,8.82365676478062,3.94175320554716
|short_description=p2@Arhgef40
}}
}}

Revision as of 21:28, 17 April 2012

Short description:p2@Arhgef40
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Arhgef40_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000093813, ENSMUST00000100639, NM_001145921, NM_001145922, NM_198249, uc007tno.2, uc007tnp.2, uc007tnq.2, uc007tnr.2, uc007tns.2, uc007tnt.2_5end
EntrezGene:Arhgef40
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Arhgef40

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.29
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.85
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B726.60
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.19
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.57
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.61
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.28
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C623.72
Mouse Meningeal cells, donor3.CNhs12109.11639-122D117.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C812.28
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.22
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D93.10
Mouse Schwann, donor2.CNhs12573.11746-123F94.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.72
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.17
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I850.96
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B685.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C58.85
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C16.11
adrenal gland, neonate N25.CNhs11223.1377-27I33.64
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F58.90
bone (os femoris), neonate N16.CNhs11225.1525-43A63.09
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F15.78
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.52
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.49
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C66.38
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C95.94
eyeball, embryo E17.CNhs11023.1261-18D47.08
eyeball, neonate N00.CNhs11207.633-15C68.23
eyeball, neonate N01.CNhs11140.1532-43E76.28
eyeball, neonate N02.CNhs11205.1551-44G86.65
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E213.37
forelimb, embryo E12.CNhs10600.359-14H216.45
forelimb, embryo E13.CNhs10589.384-1E216.72
forelimb, embryo E14.CNhs10577.413-26A813.37
forelimb, embryo E15.CNhs11007.437-20E710.01
forelimb, embryo E17.CNhs10598.1517-43C416.02
forelimb, embryo E18.CNhs11008.1520-43B510.70
gonad, embryo E13.CNhs11044.1564-45I69.16
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E96.21
heart, embryo E12.CNhs11015.353-12F56.57
heart, embryo E13.CNhs11013.376-3I94.32
heart, embryo E14.CNhs10597.403-26D48.52
heart, embryo E15.CNhs11017.431-16C85.90
heart, embryo E16.CNhs11021.457-17C64.94
heart, embryo E17.CNhs11025.479-18E55.35
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E36.54
heart, neonate N03.CNhs11221.1349-25I27.08
heart, neonate N10.CNhs11118.749-24G17.55
heart, neonate N16.CNhs11209.782-15G16.08
heart, neonate N20.CNhs11127.821-26I64.39
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D24.16
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G16.69
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I58.32
intestine, embryo E13.CNhs11010.381-16D59.52
intestine, embryo E15.CNhs10602.976-16D87.99
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D34.00
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I95.88
kidney, embryo E15.CNhs10997.434-16F85.48
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G79.33
kidney, neonate N10.CNhs11206.758-6D56.01
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H12.59
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G27.39
lung, embryo E14.CNhs10604.404-26F88.15
lung, embryo E15.CNhs11020.432-17C56.45
lung, embryo E16.CNhs10998.458-17B68.92
lung, embryo E17.CNhs10605.480-44A67.20
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C611.71
lung, neonate N06.CNhs11212.683-20E57.25
lung, neonate N07.CNhs11111.715-19A38.42
lung, neonate N10.CNhs11219.750-23E612.92
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H24.34
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.49
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.14
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.29
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.27
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D919.82
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.69
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.39
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H713.53
ovary, neonate N00.CNhs11217.1299-22I418.41
oviduct, adult pregnant day01.CNhs10500.988-6G68.08
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E65.40
pituitary gland, embryo E13.CNhs11009.370-44C78.02
pituitary gland, embryo E14.CNhs11037.398-44A55.14
pituitary gland, embryo E15.CNhs10592.427-16B96.56
pituitary gland, embryo E16.CNhs11036.449-43F66.78
pituitary gland, embryo E17.CNhs11039.1265-44F58.06
pituitary gland, neonate N00.CNhs11190.1308-22E99.13
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C35.44
skin, neonate N00.CNhs11124.650-25G47.91
skin, neonate N03.CNhs11215.662-22H36.09
skin, neonate N06.CNhs11097.693-20I54.06
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C15.57
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E38.54
stomach, embryo E15.CNhs10603.1252-16G810.17
stomach, embryo E16.CNhs11022.459-17D47.02
stomach, embryo E17.CNhs11006.1035-18D56.27
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B87.42
stomach, neonate N07.CNhs11210.718-18A97.03
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F58.97
testis, embryo E15.CNhs11034.443-27C510.26
testis, embryo E16.CNhs11033.470-26G514.78
testis, embryo E17.CNhs11029.486-18I510.46
testis, embryo E18.CNhs11027.503-18G512.33
testis, neonate N00.CNhs11189.1300-22B713.26
testis, neonate N07.CNhs11222.726-26I49.24
testis, neonate N10.CNhs11204.763-44D95.45
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I46.28
thymus, embryo E15.CNhs11005.430-45I25.34
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I84.88
whole body, embryo E12.CNhs10587.857-27C913.97
whole body, embryo E13.CNhs10512.372-23H28.20
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.77
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.73
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.76
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.81
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.74
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.52
whole body, embryo E17.5.CNhs10513.490-9F98.87
whole body, embryo E17.CNhs10517.475-3I58.99
whole body, embryo E18.CNhs10516.493-3B36.32
whole body, neonate N00.CNhs10525.657-19C210.53
whole body, neonate N01.CNhs10576.659-23C69.56
whole body, neonate N06.CNhs10515.692-21D18.82
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr14:52604501..52604531,%2B&oldid=766291"