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FFCP PHASE1:Mm9::chr1:39044651..39044672,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:39044651..39044672,+
|short_description=p1@Pdcl3
|description=CAGE_peak_1_at_Pdcl3_5end
|association_with_transcript=0bp_to_ENSMUST00000027247,NM_026850,uc007atc.1_5end
|EntrezGene=68833
|EntrezGene=68833
|HGNC=
|HGNC=
|UniProt=Q8BVF2
|UniProt=Q8BVF2
|association_with_transcript=0bp_to_ENSMUST00000027247,NM_026850,uc007atc.1_5end
|description=CAGE_peak_1_at_Pdcl3_5end
|id=chr1:39044651..39044672,+
|ontology_enrichment_disease=
|phase1_expression=19.5381593467849,50.252458700068,38.6749353481106,65.0298054309685,51.0913644545274,20.4812711732506,30.1360306368228,19.3684985162364,19.006477490475,16.8526458951835,27.2236569478553,25.606863037503,19.5168832121575,19.4947497394364,6.66219523631325,9.11138703254217,8.39474253753776,20.1895785829272,15.9052742982657,20.3707032863054,15.5629220976458,18.7659897769673,18.8063848180033,35.0383405917561,39.2289870624861,35.0281498110162,35.7532456812032,31.2433287394539,41.6151288609459,25.455043105753,27.7163138319131,3.17515336729816,5.53558308826113,0,10.3986583110459,15.4598220183398,18.1710727073509,41.8531630736908,46.880120671428,47.6406607016156,39.411509698078,36.8844561877561,57.7757320107073,33.9921408534059,31.0213409531715,36.3422569280129,8.60630478782843,13.9536100083486,17.5748946187577,15.3599620268684,13.0187372111587,4.31257693094915,19.4627823026974,15.9579671242496,19.1573465511204,33.7009861207091,22.0630748752843,26.2992767061496,20.2316460859598,17.4567023159771,13.9442908771359,17.958760199664,10.6715375533337,14.8483453351431,10.8775299882367,16.3410426437603,13.7816050838466,6.14749288514487,20.3231640124616,16.0657066614712,23.3460707100034,19.4242669394586,30.0381215694194,21.435889862617,24.6322860516867,8.27296907949019,9.91042928994498,16.0886045987337,19.3544231902867,23.0801003527839,25.1591019906627,23.4411016750542,17.3093459380856,13.5063026407603,14.515833538797,12.374400589894,22.7794689278565,25.1639251864156,40.8164182065862,37.0300644523249,41.4506218843399,30.1148356943485,32.638624017972,12.4131734076698,17.5439632710871,9.40856462904405,20.926218599631,42.0962896767803,40.2668307134447,42.0474093667305,19.5772353489586,51.3305909657271,48.4129955442627,63.9960032837998,31.8241830286485,31.4166233189122,30.8369911459018,21.8091210263405,19.9382170408322,17.9614988268438,18.0424739836781,19.485790611977,21.6778567420695,27.5822432211299,21.518733405834,18.2216557428029,29.9105910958592,24.581890676385,14.153768831198,29.6033335403759,20.5382612168166,26.6681389224372,35.4144346314432,19.0307518057506,15.7085030110091,34.4867024531598,12.9400334466394,19.7967901227825,12.8340929343795,14.6794826616726,14.640019290196,21.7382029155255,14.0797699355744,14.5757810678288,18.0775598766817,17.8465389374533,20.1641940423626,19.7807083270048,19.2069296409593,15.993581047372,19.5180664444056,21.6107978167465,26.1090088217756,22.4550178575215,17.6214532801939,23.9572656932669,20.2395725049014,15.78090561508,19.4011193639558,22.8818357003061,21.4660371480018,21.9195732427575,19.1852601965663,25.4224081561182,23.0475992776897,21.0976322827603,26.6841011179029,25.7347907114715,17.9023004619223,28.9976081549703,27.4395490177883,30.0703642639895,26.5154103855435,31.0887486160898,39.8009151249436,40.460906386571,33.2659017735528,43.0864113334855,44.7602791764667,41.370200947932,35.1838633429014,39.0353966425637,32.4934170630755,32.7463661775307,10.7247873767705,21.5070639872704,42.2936042219261,24.8583532663732,23.4617075588757,24.1526138734856,27.3199018002838,27.4289593487746,25.1287189544703,24.7293313946327,33.2170343081158,26.8459296200138,24.6308504624264,17.5081695396213,26.1251876739621,31.4586793028978,48.4149231719315,59.1449581565471,19.7254616991205,22.9639510345555,19.1603150644237,27.900231914808,25.407775818959,27.2828339373339,29.5314628370282,33.0646731474309,31.0857481125922,34.1810144063387,19.2694207606647,11.3454671886944,10.2210677458866,8.99448449539415,10.1430060694251,11.0941493486112,9.67578236769395,15.8232875597946,17.0241988113787,16.4736847912849,24.4405951096503,14.1413560114031,18.0981850406445,18.9434158460334,22.9628689308048,21.7099584613515,26.7892125741577,20.0860896476714,24.93364139563,25.9709981236038,23.2343345805617,25.6284573885978,23.3282768068293,25.172240573656,24.1181770482472,32.5553093783699,32.6882275747849,32.1172096842846,35.9184762281063,29.2191098334653,22.6186925908908,19.0366989336548,28.5223278351041,20.9711927191597,19.266070798535,22.2702204525186,38.5247121635187,30.2965112645248,23.6631164562193,25.3785183792815,19.3881057959519,16.7278158566786,19.8290819933331,15.5692091933858,15.382806663646,26.0107713541068,21.3455400091123,13.4954952897159,20.0135520143659,18.6968883850618,19.0577742443684,24.9104885688529,39.8235415019888,18.9368896200886,15.7208249621671,23.1984248099755,18.3087173586079,20.9055900601871,30.2361103006819,21.0849563096953,31.7282666762402,32.551786067389,23.1920938864997,37.1287955693473,17.3624198934432,24.1281866001956,19.0157265160649,17.5756368725906,24.1182717753492,19.2638323010236,21.3913726782757,7.00269382963578,33.3233825450469,35.5877879051218,32.4176745140794,25.3924829529879,22.7664841641227,24.9092379953284,21.3676495765614,27.2473893576802,35.5606620688418,21.3239097312086,13.4987995830304,16.9237231729842,15.7415348264255,11.6788443342908,11.2089266731241,9.37990510146743,18.6976272993241,16.9341257311626,18.5187964897928,42.005507192665,22.7761915378417,25.0082944566024,29.1614420218863,28.6450965539822,26.2035076495413,27.7820553552731,27.1929869336355,38.4781234716524,40.1806417204558,29.8242870281724,7.89170114157866,19.4371509857172,17.2076830075382,21.5840819061893,16.790777052105,25.3434188236167,15.6085127398853,21.3535191144078,18.3503852744994,12.5623742829523,7.20075015644664,15.1685337901526,15.4071163620525,19.2069489898227,18.3188360398691,21.6622301757653,21.0602236068141,18.5100992260752,20.3811547500917,21.8087531887999,18.2896335972,18.2495395097681,19.68649190943,19.3385801697062,20.6872116861377,28.5680283355166,32.8539210993616,25.837590703529,36.5988463673691,100.651778490771,34.1582105321151,22.8939530334081,22.723048182381,25.0786052017682,8.471277639256,9.20650473014354,13.7494923225455,9.6237782112465,9.59115527678899,9.82012066606611,12.1504050041725,11.7083512838297,10.4222754066367,12.4262474820437,32.5892271414315,21.1483182902546,18.6099630272006,29.6590194823319,23.686287376962,27.3926827590521,23.7803998747728,27.8147327272507,22.7852638810189,24.7643267528522,24.0805334895728,29.2370829148418,31.088980480001,28.875343734596,30.440798546475,31.9116773159659,28.7393128343242,27.5860185263098,38.3239887747075,35.7693375926586,34.9726637433124,29.993411240928,34.5732475423615,33.2843294088032,32.8441737649504,29.7843419778701,28.170907822407,35.2513413326709,34.358440803003,24.6902599529405,27.9978642773051,28.0737774770356,27.8277109355389,29.7478735077055,22.7629800957747,14.9886346762768,21.755639585423,21.7019764588781,24.484906504812,16.7649478530832,26.2010654251076
|phase1_expression=19.5381593467849,50.252458700068,38.6749353481106,65.0298054309685,51.0913644545274,20.4812711732506,30.1360306368228,19.3684985162364,19.006477490475,16.8526458951835,27.2236569478553,25.606863037503,19.5168832121575,19.4947497394364,6.66219523631325,9.11138703254217,8.39474253753776,20.1895785829272,15.9052742982657,20.3707032863054,15.5629220976458,18.7659897769673,18.8063848180033,35.0383405917561,39.2289870624861,35.0281498110162,35.7532456812032,31.2433287394539,41.6151288609459,25.455043105753,27.7163138319131,3.17515336729816,5.53558308826113,0,10.3986583110459,15.4598220183398,18.1710727073509,41.8531630736908,46.880120671428,47.6406607016156,39.411509698078,36.8844561877561,57.7757320107073,33.9921408534059,31.0213409531715,36.3422569280129,8.60630478782843,13.9536100083486,17.5748946187577,15.3599620268684,13.0187372111587,4.31257693094915,19.4627823026974,15.9579671242496,19.1573465511204,33.7009861207091,22.0630748752843,26.2992767061496,20.2316460859598,17.4567023159771,13.9442908771359,17.958760199664,10.6715375533337,14.8483453351431,10.8775299882367,16.3410426437603,13.7816050838466,6.14749288514487,20.3231640124616,16.0657066614712,23.3460707100034,19.4242669394586,30.0381215694194,21.435889862617,24.6322860516867,8.27296907949019,9.91042928994498,16.0886045987337,19.3544231902867,23.0801003527839,25.1591019906627,23.4411016750542,17.3093459380856,13.5063026407603,14.515833538797,12.374400589894,22.7794689278565,25.1639251864156,40.8164182065862,37.0300644523249,41.4506218843399,30.1148356943485,32.638624017972,12.4131734076698,17.5439632710871,9.40856462904405,20.926218599631,42.0962896767803,40.2668307134447,42.0474093667305,19.5772353489586,51.3305909657271,48.4129955442627,63.9960032837998,31.8241830286485,31.4166233189122,30.8369911459018,21.8091210263405,19.9382170408322,17.9614988268438,18.0424739836781,19.485790611977,21.6778567420695,27.5822432211299,21.518733405834,18.2216557428029,29.9105910958592,24.581890676385,14.153768831198,29.6033335403759,20.5382612168166,26.6681389224372,35.4144346314432,19.0307518057506,15.7085030110091,34.4867024531598,12.9400334466394,19.7967901227825,12.8340929343795,14.6794826616726,14.640019290196,21.7382029155255,14.0797699355744,14.5757810678288,18.0775598766817,17.8465389374533,20.1641940423626,19.7807083270048,19.2069296409593,15.993581047372,19.5180664444056,21.6107978167465,26.1090088217756,22.4550178575215,17.6214532801939,23.9572656932669,20.2395725049014,15.78090561508,19.4011193639558,22.8818357003061,21.4660371480018,21.9195732427575,19.1852601965663,25.4224081561182,23.0475992776897,21.0976322827603,26.6841011179029,25.7347907114715,17.9023004619223,28.9976081549703,27.4395490177883,30.0703642639895,26.5154103855435,31.0887486160898,39.8009151249436,40.460906386571,33.2659017735528,43.0864113334855,44.7602791764667,41.370200947932,35.1838633429014,39.0353966425637,32.4934170630755,32.7463661775307,10.7247873767705,21.5070639872704,42.2936042219261,24.8583532663732,23.4617075588757,24.1526138734856,27.3199018002838,27.4289593487746,25.1287189544703,24.7293313946327,33.2170343081158,26.8459296200138,24.6308504624264,17.5081695396213,26.1251876739621,31.4586793028978,48.4149231719315,59.1449581565471,19.7254616991205,22.9639510345555,19.1603150644237,27.900231914808,25.407775818959,27.2828339373339,29.5314628370282,33.0646731474309,31.0857481125922,34.1810144063387,19.2694207606647,11.3454671886944,10.2210677458866,8.99448449539415,10.1430060694251,11.0941493486112,9.67578236769395,15.8232875597946,17.0241988113787,16.4736847912849,24.4405951096503,14.1413560114031,18.0981850406445,18.9434158460334,22.9628689308048,21.7099584613515,26.7892125741577,20.0860896476714,24.93364139563,25.9709981236038,23.2343345805617,25.6284573885978,23.3282768068293,25.172240573656,24.1181770482472,32.5553093783699,32.6882275747849,32.1172096842846,35.9184762281063,29.2191098334653,22.6186925908908,19.0366989336548,28.5223278351041,20.9711927191597,19.266070798535,22.2702204525186,38.5247121635187,30.2965112645248,23.6631164562193,25.3785183792815,19.3881057959519,16.7278158566786,19.8290819933331,15.5692091933858,15.382806663646,26.0107713541068,21.3455400091123,13.4954952897159,20.0135520143659,18.6968883850618,19.0577742443684,24.9104885688529,39.8235415019888,18.9368896200886,15.7208249621671,23.1984248099755,18.3087173586079,20.9055900601871,30.2361103006819,21.0849563096953,31.7282666762402,32.551786067389,23.1920938864997,37.1287955693473,17.3624198934432,24.1281866001956,19.0157265160649,17.5756368725906,24.1182717753492,19.2638323010236,21.3913726782757,7.00269382963578,33.3233825450469,35.5877879051218,32.4176745140794,25.3924829529879,22.7664841641227,24.9092379953284,21.3676495765614,27.2473893576802,35.5606620688418,21.3239097312086,13.4987995830304,16.9237231729842,15.7415348264255,11.6788443342908,11.2089266731241,9.37990510146743,18.6976272993241,16.9341257311626,18.5187964897928,42.005507192665,22.7761915378417,25.0082944566024,29.1614420218863,28.6450965539822,26.2035076495413,27.7820553552731,27.1929869336355,38.4781234716524,40.1806417204558,29.8242870281724,7.89170114157866,19.4371509857172,17.2076830075382,21.5840819061893,16.790777052105,25.3434188236167,15.6085127398853,21.3535191144078,18.3503852744994,12.5623742829523,7.20075015644664,15.1685337901526,15.4071163620525,19.2069489898227,18.3188360398691,21.6622301757653,21.0602236068141,18.5100992260752,20.3811547500917,21.8087531887999,18.2896335972,18.2495395097681,19.68649190943,19.3385801697062,20.6872116861377,28.5680283355166,32.8539210993616,25.837590703529,36.5988463673691,100.651778490771,34.1582105321151,22.8939530334081,22.723048182381,25.0786052017682,8.471277639256,9.20650473014354,13.7494923225455,9.6237782112465,9.59115527678899,9.82012066606611,12.1504050041725,11.7083512838297,10.4222754066367,12.4262474820437,32.5892271414315,21.1483182902546,18.6099630272006,29.6590194823319,23.686287376962,27.3926827590521,23.7803998747728,27.8147327272507,22.7852638810189,24.7643267528522,24.0805334895728,29.2370829148418,31.088980480001,28.875343734596,30.440798546475,31.9116773159659,28.7393128343242,27.5860185263098,38.3239887747075,35.7693375926586,34.9726637433124,29.993411240928,34.5732475423615,33.2843294088032,32.8441737649504,29.7843419778701,28.170907822407,35.2513413326709,34.358440803003,24.6902599529405,27.9978642773051,28.0737774770356,27.8277109355389,29.7478735077055,22.7629800957747,14.9886346762768,21.755639585423,21.7019764588781,24.484906504812,16.7649478530832,26.2010654251076
|short_description=p1@Pdcl3
}}
}}

Revision as of 07:09, 18 April 2012

Short description:p1@Pdcl3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pdcl3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000027247, NM_026850, uc007atc.1_5end
EntrezGene:Pdcl3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pdcl3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G719.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I550.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I638.67
CD326+ enterocyte, pool1.CNhs13542.11848-124I365.03
CD326+ enterocyte, pool2.CNhs13197.11849-124I451.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I720.48
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I830.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.37
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E627.22
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F125.61
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.52
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E819.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.11
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A220.19
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A620.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I918.81
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D135.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D239.23
GP2+ M cell, pool1.CNhs13228.11845-124H935.03
GP2+ M cell, pool2.CNhs13231.11846-124I135.75
GP2+ M cell, pool3.CNhs13240.11847-124I231.24
Ileum epithelium, pool1.CNhs13199.10252-104B941.62
Ileum epithelium, pool2.CNhs13232.10253-104C125.46
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C827.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.40
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F615.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F718.17
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G841.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H146.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H347.64
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G939.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H236.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H457.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D833.99
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D931.02
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B336.34
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.95
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B817.57
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.02
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A219.46
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.96
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A119.16
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C133.70
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E122.06
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C526.30
Mouse Granule cells, donor1.CNhs12131.11713-123C320.23
Mouse Granule cells, donor2.CNhs12357.11731-123E317.46
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C617.96
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C714.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D216.34
Mouse Microglia, donor1.CNhs12629.11718-123C813.78
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.32
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.07
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D923.35
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D530.04
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D221.44
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F224.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.35
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D423.08
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.16
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D823.44
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.31
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E513.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.52
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.78
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.16
Mouse Schwann, donor1.CNhs12507.11728-123D940.82
Mouse Schwann, donor2.CNhs12573.11746-123F937.03
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G341.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F730.11
Mouse hepatocyte, donor1.CNhs13078.11714-123C432.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.41
Mouse hepatocyte, donor6.CNhs13090.11822-124F417.54
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.41
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I742.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E340.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I842.05
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H151.33
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I848.41
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B664.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G131.82
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G231.42
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G330.84
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B621.81
accessory axillary lymph node, adult.CNhs10475.1063-29H919.94
adrenal gland, adult.CNhs10508.49-24D717.96
adrenal gland, embryo E14.CNhs11038.406-44C518.04
adrenal gland, embryo E16.CNhs11004.1254-43D619.49
adrenal gland, embryo E17.CNhs11043.1263-45I121.68
adrenal gland, embryo E18.CNhs11026.1262-18F527.58
adrenal gland, neonate N00.CNhs11191.1311-23C121.52
adrenal gland, neonate N25.CNhs11223.1377-27I318.22
amnion, adult pregnant day17.5.CNhs10488.583-22A829.91
aorta, adult.CNhs10498.46-23H124.58
bone (os femoris), adult.CNhs10483.56-12G214.15
bone (os femoris), neonate N02.CNhs11227.1985-43F529.60
bone (os femoris), neonate N16.CNhs11225.1525-43A620.54
bone (os femoris), neonate N20.CNhs11195.1350-25C326.67
cecum, adult.CNhs10467.37-13H435.41
cerebellum, adult.CNhs10494.15-8B219.03
cerebellum, neonate N30.CNhs11135.1395-42I215.71
colon, adult.CNhs10468.36-18H734.49
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.94
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D119.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.83
corpora quadrigemina, adult.CNhs10501.16-22A414.68
corpus striatum, adult.CNhs10487.19-21D814.64
corpus striatum, neonate N00.CNhs11226.630-43F121.74
cortex, adult.CNhs10473.12-14D514.08
cortex, neonate N30.CNhs11107.1392-42F214.58
diencephalon, adult.CNhs10482.20-12F218.08
diencephalon, neonate N30.CNhs11201.1388-42B217.85
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.78
epididymis, adult.CNhs10490.58-23B219.21
eyeball, adult.CNhs10484.31-12G415.99
eyeball, embryo E12.CNhs11016.345-16C619.52
eyeball, embryo E14.CNhs10521.399-16E221.61
eyeball, embryo E15.CNhs10593.426-16C926.11
eyeball, embryo E17.CNhs11023.1261-18D422.46
eyeball, neonate N00.CNhs11207.633-15C617.62
eyeball, neonate N01.CNhs11140.1532-43E723.96
eyeball, neonate N02.CNhs11205.1551-44G820.24
eyeball, neonate N16.CNhs11188.777-19A215.78
forelimb, embryo E11.CNhs10596.335-25E219.40
forelimb, embryo E12.CNhs10600.359-14H222.88
forelimb, embryo E13.CNhs10589.384-1E221.47
forelimb, embryo E14.CNhs10577.413-26A821.92
forelimb, embryo E15.CNhs11007.437-20E719.19
forelimb, embryo E17.CNhs10598.1517-43C425.42
forelimb, embryo E18.CNhs11008.1520-43B523.05
gonad, embryo E13.CNhs11044.1564-45I621.10
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C826.68
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D225.73
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.90
heart, embryo E11.CNhs10586.331-24E929.00
heart, embryo E12.CNhs11015.353-12F527.44
heart, embryo E13.CNhs11013.376-3I930.07
heart, embryo E14.CNhs10597.403-26D426.52
heart, embryo E15.CNhs11017.431-16C831.09
heart, embryo E16.CNhs11021.457-17C639.80
heart, embryo E17.CNhs11025.479-18E540.46
heart, embryo E18.CNhs11030.1283-20G333.27
heart, neonate N00.CNhs11213.639-21E343.09
heart, neonate N03.CNhs11221.1349-25I244.76
heart, neonate N10.CNhs11118.749-24G141.37
heart, neonate N16.CNhs11209.782-15G135.18
heart, neonate N20.CNhs11127.821-26I639.04
heart, neonate N25.CNhs11196.1351-25D332.49
heart, neonate N30.CNhs11202.1390-42D232.75
hippocampus, adult.CNhs10478.13-16E810.72
hippocampus, neonate N00.CNhs11228.627-43G121.51
intestinal mucosa, adult.CNhs10506.860-29I342.29
intestine, adult.CNhs10496.178-9A324.86
intestine, embryo E12.CNhs11019.1251-16I523.46
intestine, embryo E13.CNhs11010.381-16D524.15
intestine, embryo E15.CNhs10602.976-16D827.32
intestine, embryo E16.CNhs10585.463-22H427.43
intestine, embryo E17.CNhs10582.482-18D325.13
intestine, embryo E18.CNhs10526.1289-20F724.73
intestine, neonate N00.CNhs11126.644-26D133.22
intestine, neonate N01.CNhs11192.1322-23E926.85
intestine, neonate N06.CNhs11102.688-20B824.63
intestine, neonate N07.CNhs11095.720-20F217.51
intestine, neonate N10.CNhs11098.755-23A526.13
intestine, neonate N20.CNhs11187.827-18D131.46
intestine, neonate N25.CNhs11121.1352-25E348.41
intestine, neonate N30.CNhs11131.1384-42G159.14
kidney, embryo E14.CNhs10606.411-4I919.73
kidney, embryo E15.CNhs10997.434-16F822.96
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I227.90
kidney, embryo E18.CNhs11001.1288-20C725.41
kidney, neonate N00.CNhs11214.646-21G727.28
kidney, neonate N10.CNhs11206.758-6D529.53
kidney, neonate N20.CNhs11113.832-19I133.06
kidney, neonate N25.CNhs11122.1353-25F331.09
kidney, neonate N30.CNhs11203.1385-42H134.18
liver, adult pregnant day01.CNhs10466.508-5B219.27
liver, embryo E12.CNhs10601.355-15F811.35
liver, embryo E13.CNhs10524.378-3H610.22
liver, embryo E14.CNhs10594.409-16E18.99
liver, embryo E15.CNhs10520.433-16D710.14
liver, embryo E16.CNhs10523.462-17F511.09
liver, embryo E17.CNhs10510.481-18A39.68
liver, embryo E18.CNhs10579.499-43G415.82
liver, neonate N00.CNhs11117.641-24F417.02
liver, neonate N03.CNhs11123.1345-25G216.47
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H214.14
liver, neonate N10.CNhs11115.751-24B918.10
liver, neonate N20.CNhs11220.823-25A318.94
liver, neonate N25.CNhs11198.1368-26H122.96
liver, neonate N30.CNhs11106.1382-42D121.71
lung, adult.CNhs10474.28-22B126.79
lung, embryo E12.CNhs10522.354-16G220.09
lung, embryo E14.CNhs10604.404-26F824.93
lung, embryo E15.CNhs11020.432-17C525.97
lung, embryo E16.CNhs10998.458-17B623.23
lung, embryo E17.CNhs10605.480-44A625.63
lung, embryo E18.CNhs10583.1287-20I623.33
lung, neonate N00.CNhs11224.640-42C625.17
lung, neonate N06.CNhs11212.683-20E524.12
lung, neonate N07.CNhs11111.715-19A332.56
lung, neonate N10.CNhs11219.750-23E632.69
lung, neonate N20.CNhs11109.822-18A432.12
lung, neonate N25.CNhs11119.1359-25C735.92
lung, neonate N30.CNhs11133.1394-42H229.22
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A119.04
mammary gland, adult lactating day02.CNhs10480.595-22B628.52
mammary gland, adult pregnant day19.CNhs10476.588-5H220.97
medulla oblongata, adult.CNhs10477.17-12C219.27
medulla oblongata, neonate N30.CNhs11200.1396-42A322.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C738.52
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C230.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E123.66
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E225.38
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E319.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.73
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.83
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D415.38
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D526.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D621.35
olfactory brain, adult.CNhs10489.18-22I913.50
ovary, adult.CNhs10507.91-2I720.01
ovary, embryo E18.CNhs11040.505-44H718.70
ovary, neonate N00.CNhs11217.1299-22I419.06
oviduct, adult pregnant day01.CNhs10500.988-6G624.91
pancreas, adult.CNhs10486.34-16E439.82
pancreas, embryo E14.CNhs11012.405-44F418.94
pancreas, embryo E15.CNhs11042.1556-45F215.72
pancreas, embryo E16.CNhs11003.460-26E523.20
pancreas, embryo E17.CNhs10599.1558-45G318.31
pancreas, embryo E18.CNhs10580.1535-43I720.91
pancreas, neonate N00.CNhs11105.645-26G930.24
pancreas, neonate N01.CNhs11138.1531-43D721.08
pancreas, neonate N02.CNhs11139.1539-43D831.73
pancreas, neonate N16.CNhs11136.787-43B632.55
pancreas, neonate N25.CNhs11094.1555-45E223.19
pancreas, neonate N30.CNhs11182.1548-44H537.13
pituitary gland, adult.CNhs10493.21-1G817.36
pituitary gland, embryo E12.CNhs11018.346-16E624.13
pituitary gland, embryo E13.CNhs11009.370-44C719.02
pituitary gland, embryo E14.CNhs11037.398-44A517.58
pituitary gland, embryo E15.CNhs10592.427-16B924.12
pituitary gland, embryo E16.CNhs11036.449-43F619.26
pituitary gland, embryo E17.CNhs11039.1265-44F521.39
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I733.32
placenta, adult pregnant day17.CNhs10464.577-18G335.59
prostate, adult.CNhs10470.859-1F832.42
skin, adult.CNhs10492.30-1C325.39
skin, neonate N00.CNhs11124.650-25G422.77
skin, neonate N03.CNhs11215.662-22H324.91
skin, neonate N06.CNhs11097.693-20I521.37
skin, neonate N10.CNhs11108.762-6C427.25
small intestine, neonate N16.CNhs11114.790-21I135.56
spinal cord, adult.CNhs10505.24-13C921.32
spleen, adult.CNhs10465.25-2G213.50
spleen, embryo E16.CNhs11035.461-43C116.92
spleen, embryo E18.CNhs11011.1271-21F215.74
spleen, neonate N10.CNhs11116.752-24D111.68
spleen, neonate N20.CNhs11112.824-19H111.21
spleen, neonate N25.CNhs11099.1354-25G39.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C618.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C916.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D318.52
stomach, adult.CNhs10503.33-1H642.01
stomach, embryo E12.CNhs10588.356-43E322.78
stomach, embryo E15.CNhs10603.1252-16G825.01
stomach, embryo E16.CNhs11022.459-17D429.16
stomach, embryo E17.CNhs11006.1035-18D528.65
stomach, embryo E18.CNhs10999.1286-20C626.20
stomach, neonate N03.CNhs11193.1340-24B827.78
stomach, neonate N07.CNhs11210.718-18A927.19
stomach, neonate N25.CNhs11104.1355-25E438.48
stomach, neonate N30.CNhs11134.1386-42I140.18
submandibular gland, adult.CNhs10469.59-29C129.82
testis, adult.CNhs10504.57-7G57.89
testis, embryo E13.CNhs11031.389-23F519.44
testis, embryo E15.CNhs11034.443-27C517.21
testis, embryo E16.CNhs11033.470-26G521.58
testis, embryo E17.CNhs11029.486-18I516.79
testis, embryo E18.CNhs11027.503-18G525.34
testis, neonate N00.CNhs11189.1300-22B715.61
testis, neonate N07.CNhs11222.726-26I421.35
testis, neonate N10.CNhs11204.763-44D918.35
testis, neonate N20.CNhs11110.839-18H312.56
testis, neonate N30.CNhs11130.1391-42E27.20
thymus, adult.CNhs10471.38-12B515.17
thymus, embryo E14.CNhs11041.402-44I415.41
thymus, embryo E15.CNhs11005.430-45I219.21
thymus, embryo E16.CNhs11002.456-26C518.32
thymus, embryo E17.CNhs10581.478-18C121.66
thymus, embryo E18.CNhs10595.1273-19G421.06
thymus, neonate N02.CNhs11181.1541-43F818.51
thymus, neonate N03.CNhs11137.2104-43C720.38
thymus, neonate N06.CNhs11197.681-26C421.81
thymus, neonate N07.CNhs11211.713-19D318.29
thymus, neonate N10.CNhs11194.748-24E418.25
thymus, neonate N20.CNhs11186.820-7A219.69
thymus, neonate N25.CNhs11125.1362-25G719.34
thymus, neonate N30.CNhs11132.1393-42G220.69
tongue, adult.CNhs10499.32-1B428.57
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H332.85
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F725.84
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G536.60
urinary bladder, adult.CNhs10481.879-12E4100.65
uterus, adult pregnant day19.CNhs10497.590-15F534.16
uterus, adult.CNhs10509.92-27E522.89
vagina, adult.CNhs10502.89-27D522.72
vesicular gland, adult.CNhs10491.51-27F825.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I832.59
whole body, embryo E12.CNhs10587.857-27C921.15
whole body, embryo E13.CNhs10512.372-23H218.61
whole body, embryo E14.5.CNhs10578.420-27D229.66
whole body, embryo E14.CNhs10519.395-14B123.69
whole body, embryo E16.CNhs10514.453-14F227.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G523.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G527.81
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G522.79
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G524.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G524.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G529.24
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G531.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G528.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G530.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G531.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G528.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G527.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G538.32
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G535.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G534.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G529.99
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G534.57
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G533.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G532.84
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G529.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G528.17
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G535.25
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G534.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G528.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G528.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.83
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G529.75
whole body, embryo E17.5.CNhs10513.490-9F922.76
whole body, embryo E17.CNhs10517.475-3I514.99
whole body, embryo E18.CNhs10516.493-3B321.76
whole body, neonate N00.CNhs10525.657-19C221.70
whole body, neonate N01.CNhs10576.659-23C624.48
whole body, neonate N06.CNhs10515.692-21D116.76
whole body, neonate N10.CNhs10518.761-6B426.20





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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