Personal tools

FFCP PHASE1:Mm9::chr3:115710375..115710458,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_2_at_Extl2_5end
|description=CAGE_peak_2_at_Extl2_5end
|id=chr3:115710375..115710458,+
|id=chr3:115710375..115710458,+
|ontology_enrichment_celltype=CL:0000393!1.65e-11!39;CL:0000211!1.65e-11!39;CL:0000055!2.65e-11!50;CL:0000221!1.54e-09!44;CL:0000133!1.54e-09!44;CL:0002319!3.01e-09!43;CL:0000540!1.32e-08!33;CL:0000047!1.32e-08!33;CL:0000031!1.32e-08!33;CL:0000404!1.32e-08!33;CL:0000117!5.36e-07!23;CL:0000337!5.36e-07!23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=10.089377367602,1.04692622291808,2.27499619694768,0.30246421130683,1.00179145989269,0.839396359559449,0.934450562382103,2.58246646883153,6.89864738543167,7.2560003159818,6.33506482434368,6.94017783259427,3.25281386869291,2.71003247498892,0.999329285446988,0.607425802169478,0.699561878128147,1.26184866143295,1.50825876966313,1.69755860719212,5.6128571499706,2.97872853602656,3.6567970479451,1.91990907352088,1.83527424853736,0.57423196411502,0.86152399231815,1.72376986148711,2.47030445293286,1.26015064879965,1.33038306393183,5.71527606113668,3.07532393792285,15.8481681015439,1.44425809875637,1.99481574430191,2.6542016314108,6.27797446105362,3.1253413780952,5.23523743973798,7.64700934440319,3.41522742479223,2.42755176515577,14.604030885167,14.192770370732,12.4811791469943,3.12956537739216,2.61630187656536,5.27246838562732,8.94377535741704,4.4795654920116,5.75010257459886,1.51004345451963,4.35217285206807,3.36093799142464,10.0331180054019,11.1748041576115,11.8604581223812,5.05791152148994,4.23192783417626,5.70448263155561,5.76035704517525,1.77858959222228,4.04954872776629,4.94433181283487,3.5524005747305,5.69240209984969,4.2264013585371,5.18448061542388,5.53524347159932,4.41682418837902,13.9968982357864,17.6694832761291,4.89963196859816,4.2172007248024,3.67687514644008,30.8324466798288,20.5576614317152,21.8121277223866,4.08847491963601,4.20843160571084,5.73004707612436,20.3803589271008,17.4456409109821,15.4326230254578,15.3206864446307,14.3795397607094,7.45597783301202,6.73963120665338,8.31287161174641,15.0729534124872,1.72084775396277,0,7.01614149129162,5.84798775702902,6.72040330646003,3.93244376368905,5.45377032249785,5.19572009205738,7.77347063922748,6.61964072950398,7.69958864485907,2.54805239706646,0,4.5463118612355,3.29367825117628,4.54972000513305,2.8545969929765,3.36619248741323,4.89859058913922,5.89850111004862,5.1759131313064,6.6878494204257,7.08396410597326,6.93773372100658,4.52399728786832,1.48316980640624,5.06097749219691,2.65383165584962,5.17653919831709,2.20841518460394,4.363877278217,0,12.0040126774734,13.1951425292477,2.81002760729451,2.63593273913025,4.79922184794726,2.41433431438823,17.6752954497691,12.3525162761029,7.28795242254614,14.0797699355744,16.8772201838018,18.4931359658008,15.8996437806402,8.45266719957625,3.85661608891288,2.52722758433675,3.36706969418358,4.81445638962004,2.75882525320168,3.06105620669094,4.06903008156431,6.53150391852747,6.66191345481219,6.09061209638237,4.9153640440413,1.72454394346274,2.26927296201383,2.63926686245923,2.41115305670332,2.50242524303038,3.83077383174383,2.88094990971121,2.38841120182192,1.40442637462647,2.31613116403244,2.84163499395593,4.34964122324554,5.8631514995274,3.96136535214233,4.49814997611899,4.52557733019029,5.09081472528348,3.25547522650571,4.82892122519315,6.07179780309281,7.89887279584706,5.58169377868924,5.51267904911819,4.09359964790931,5.70830299756732,6.57611451925822,10.5144974282064,3.91037527041281,0.660837565967596,1.32225283331772,3.62590025909898,2.78684006232526,4.51036114627327,4.03367049246685,3.55804870151792,4.75564065281398,2.37264530772256,4.44687177754829,2.76468729680296,5.57078121715222,4.67913809085888,2.69645822596266,1.94524244887225,3.58454291857861,2.84501851429623,3.77020091612105,1.1270773567308,3.05476991767971,2.90928730751439,5.6810014111158,5.31186911843761,5.60918562322488,6.43694784149637,7.15703550746443,7.11486305009157,2.00214126859313,2.55526693647164,1.12431056192427,1.01430060694251,1.68824011826692,1.78238096246994,3.45235364940973,2.59416362840057,1.92192989231657,0,4.83783231969054,4.05648975048929,4.04126204715379,3.58794827043824,12.5435315554475,3.32555742299888,2.27389694124582,3.7481944581666,4.07388205860452,3.98973422090454,2.1775813467436,3.09456733151818,2.73187107000918,4.09851374676097,4.65075848262427,4.78364305972461,3.11340297959902,3.7990696010497,4.62876987460837,3.01582567878545,2.71952841909355,2.95058563811422,3.86311444826625,22.9587343682543,18.9882932279369,7.70494243270374,7.32165688892682,5.99465616890888,5.46614242015294,4.52389135238878,5.9742199488138,4.23317480756549,3.96307143104365,5.26253912177363,7.01414058987149,7.90575555893047,5.78378369559253,5.67760340833074,6.7664929393557,7.65568708961808,6.76377504187395,0,2.42780636154981,2.41858845571801,2.82907619633847,3.54362271456927,1.53717573971964,5.68542244970086,3.27180356529755,3.56497378384721,2.84433082142234,4.21674434299995,4.12542172992747,7.83011093233712,3.6012218806262,3.10460841078611,4.28674070063185,4.78818630834139,5.17269571046005,7.24015690649332,7.91608867697958,4.22409074514679,4.2366414172764,1.54369878638473,1.97863503529776,3.06782410722221,2.47282992205439,3.70054266409723,2.9545361954111,2.91480836629851,21.1384844291981,1.70870880797853,5.15967169908056,2.96311243791539,0.941842285023455,1.0935538217682,1.14389086603261,3.0596117398894,3.91864066506242,3.86959926652387,2.86401185404534,2.53068794864908,3.86306987541013,3.24016022465404,4.80903080833278,3.05707589244649,4.45052343069908,5.2898211664215,2.09404753587224,5.05498395837992,4.34937519160848,1.69107881605257,3.88743019714345,2.48187735685646,3.69457257853691,5.03723311563151,3.37912250981556,5.51579021635044,5.33837977860195,3.25063967719704,1.93267296660805,2.01621004380506,0.632022241256357,3.04087822935246,2.46506297195585,2.7283372825337,1.43221356533985,1.98681354781265,1.56254084375959,2.80610101631697,2.22126189885925,3.20068587950999,2.72230699869469,1.75424185331554,2.98256709085021,2.68816875017609,3.17422537061296,4.43971906748129,5.29311753995907,2.68615386182526,4.82973985080476,6.56888664079137,3.84618410961257,2.57242054894879,8.52672576860118,12.9892923801925,17.4923589872727,13.1765968091061,18.7319968754619,17.1270629942661,15.8632718451837,13.5004500046361,9.00642406448441,11.3285602246051,8.28416498802912,1.764384908931,3.19219898720825,2.73173769206615,3.64660075602441,2.09613162627982,3.49302666055027,2.22246727801615,3.29656091582231,2.88827288632634,3.53776096469316,3.8021894983536,3.2066478035633,3.37109426891577,4.28968521112624,4.02048282689293,3.33405583898152,3.82418275618023,2.89363830695558,3.70877310722976,3.09117732282234,2.40008476669791,4.08194354166476,2.14592570952589,4.50573891560218,3.48204707536723,4.23073039458383,2.19513567447327,3.6829759601298,3.93831930152999,2.24456908663095,3.2031454893527,3.64466584789585,4.50154147486658,2.94379998253335,3.08650577569826,4.24677982494508,3.97683734357194,8.37997110788363,5.35607329792761,6.61774257358547,4.63735671240843
|phase1_expression=10.089377367602,1.04692622291808,2.27499619694768,0.30246421130683,1.00179145989269,0.839396359559449,0.934450562382103,2.58246646883153,6.89864738543167,7.2560003159818,6.33506482434368,6.94017783259427,3.25281386869291,2.71003247498892,0.999329285446988,0.607425802169478,0.699561878128147,1.26184866143295,1.50825876966313,1.69755860719212,5.6128571499706,2.97872853602656,3.6567970479451,1.91990907352088,1.83527424853736,0.57423196411502,0.86152399231815,1.72376986148711,2.47030445293286,1.26015064879965,1.33038306393183,5.71527606113668,3.07532393792285,15.8481681015439,1.44425809875637,1.99481574430191,2.6542016314108,6.27797446105362,3.1253413780952,5.23523743973798,7.64700934440319,3.41522742479223,2.42755176515577,14.604030885167,14.192770370732,12.4811791469943,3.12956537739216,2.61630187656536,5.27246838562732,8.94377535741704,4.4795654920116,5.75010257459886,1.51004345451963,4.35217285206807,3.36093799142464,10.0331180054019,11.1748041576115,11.8604581223812,5.05791152148994,4.23192783417626,5.70448263155561,5.76035704517525,1.77858959222228,4.04954872776629,4.94433181283487,3.5524005747305,5.69240209984969,4.2264013585371,5.18448061542388,5.53524347159932,4.41682418837902,13.9968982357864,17.6694832761291,4.89963196859816,4.2172007248024,3.67687514644008,30.8324466798288,20.5576614317152,21.8121277223866,4.08847491963601,4.20843160571084,5.73004707612436,20.3803589271008,17.4456409109821,15.4326230254578,15.3206864446307,14.3795397607094,7.45597783301202,6.73963120665338,8.31287161174641,15.0729534124872,1.72084775396277,0,7.01614149129162,5.84798775702902,6.72040330646003,3.93244376368905,5.45377032249785,5.19572009205738,7.77347063922748,6.61964072950398,7.69958864485907,2.54805239706646,0,4.5463118612355,3.29367825117628,4.54972000513305,2.8545969929765,3.36619248741323,4.89859058913922,5.89850111004862,5.1759131313064,6.6878494204257,7.08396410597326,6.93773372100658,4.52399728786832,1.48316980640624,5.06097749219691,2.65383165584962,5.17653919831709,2.20841518460394,4.363877278217,0,12.0040126774734,13.1951425292477,2.81002760729451,2.63593273913025,4.79922184794726,2.41433431438823,17.6752954497691,12.3525162761029,7.28795242254614,14.0797699355744,16.8772201838018,18.4931359658008,15.8996437806402,8.45266719957625,3.85661608891288,2.52722758433675,3.36706969418358,4.81445638962004,2.75882525320168,3.06105620669094,4.06903008156431,6.53150391852747,6.66191345481219,6.09061209638237,4.9153640440413,1.72454394346274,2.26927296201383,2.63926686245923,2.41115305670332,2.50242524303038,3.83077383174383,2.88094990971121,2.38841120182192,1.40442637462647,2.31613116403244,2.84163499395593,4.34964122324554,5.8631514995274,3.96136535214233,4.49814997611899,4.52557733019029,5.09081472528348,3.25547522650571,4.82892122519315,6.07179780309281,7.89887279584706,5.58169377868924,5.51267904911819,4.09359964790931,5.70830299756732,6.57611451925822,10.5144974282064,3.91037527041281,0.660837565967596,1.32225283331772,3.62590025909898,2.78684006232526,4.51036114627327,4.03367049246685,3.55804870151792,4.75564065281398,2.37264530772256,4.44687177754829,2.76468729680296,5.57078121715222,4.67913809085888,2.69645822596266,1.94524244887225,3.58454291857861,2.84501851429623,3.77020091612105,1.1270773567308,3.05476991767971,2.90928730751439,5.6810014111158,5.31186911843761,5.60918562322488,6.43694784149637,7.15703550746443,7.11486305009157,2.00214126859313,2.55526693647164,1.12431056192427,1.01430060694251,1.68824011826692,1.78238096246994,3.45235364940973,2.59416362840057,1.92192989231657,0,4.83783231969054,4.05648975048929,4.04126204715379,3.58794827043824,12.5435315554475,3.32555742299888,2.27389694124582,3.7481944581666,4.07388205860452,3.98973422090454,2.1775813467436,3.09456733151818,2.73187107000918,4.09851374676097,4.65075848262427,4.78364305972461,3.11340297959902,3.7990696010497,4.62876987460837,3.01582567878545,2.71952841909355,2.95058563811422,3.86311444826625,22.9587343682543,18.9882932279369,7.70494243270374,7.32165688892682,5.99465616890888,5.46614242015294,4.52389135238878,5.9742199488138,4.23317480756549,3.96307143104365,5.26253912177363,7.01414058987149,7.90575555893047,5.78378369559253,5.67760340833074,6.7664929393557,7.65568708961808,6.76377504187395,0,2.42780636154981,2.41858845571801,2.82907619633847,3.54362271456927,1.53717573971964,5.68542244970086,3.27180356529755,3.56497378384721,2.84433082142234,4.21674434299995,4.12542172992747,7.83011093233712,3.6012218806262,3.10460841078611,4.28674070063185,4.78818630834139,5.17269571046005,7.24015690649332,7.91608867697958,4.22409074514679,4.2366414172764,1.54369878638473,1.97863503529776,3.06782410722221,2.47282992205439,3.70054266409723,2.9545361954111,2.91480836629851,21.1384844291981,1.70870880797853,5.15967169908056,2.96311243791539,0.941842285023455,1.0935538217682,1.14389086603261,3.0596117398894,3.91864066506242,3.86959926652387,2.86401185404534,2.53068794864908,3.86306987541013,3.24016022465404,4.80903080833278,3.05707589244649,4.45052343069908,5.2898211664215,2.09404753587224,5.05498395837992,4.34937519160848,1.69107881605257,3.88743019714345,2.48187735685646,3.69457257853691,5.03723311563151,3.37912250981556,5.51579021635044,5.33837977860195,3.25063967719704,1.93267296660805,2.01621004380506,0.632022241256357,3.04087822935246,2.46506297195585,2.7283372825337,1.43221356533985,1.98681354781265,1.56254084375959,2.80610101631697,2.22126189885925,3.20068587950999,2.72230699869469,1.75424185331554,2.98256709085021,2.68816875017609,3.17422537061296,4.43971906748129,5.29311753995907,2.68615386182526,4.82973985080476,6.56888664079137,3.84618410961257,2.57242054894879,8.52672576860118,12.9892923801925,17.4923589872727,13.1765968091061,18.7319968754619,17.1270629942661,15.8632718451837,13.5004500046361,9.00642406448441,11.3285602246051,8.28416498802912,1.764384908931,3.19219898720825,2.73173769206615,3.64660075602441,2.09613162627982,3.49302666055027,2.22246727801615,3.29656091582231,2.88827288632634,3.53776096469316,3.8021894983536,3.2066478035633,3.37109426891577,4.28968521112624,4.02048282689293,3.33405583898152,3.82418275618023,2.89363830695558,3.70877310722976,3.09117732282234,2.40008476669791,4.08194354166476,2.14592570952589,4.50573891560218,3.48204707536723,4.23073039458383,2.19513567447327,3.6829759601298,3.93831930152999,2.24456908663095,3.2031454893527,3.64466584789585,4.50154147486658,2.94379998253335,3.08650577569826,4.24677982494508,3.97683734357194,8.37997110788363,5.35607329792761,6.61774257358547,4.63735671240843
|short_description=p2@Extl2
|short_description=p2@Extl2
}}
}}

Revision as of 18:24, 18 April 2012

Short description:p2@Extl2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Extl2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000029575, ENSMUST00000106501, ENSMUST00000128228, ENSMUST00000145945_5end
EntrezGene:Extl2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Extl2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.26
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.94
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.71
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D814.60
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.19
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.48
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.48
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.17
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.86
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.67
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D330.83
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.81
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E517.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.32
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.38
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D96.74
Mouse Schwann, donor2.CNhs12573.11746-123F98.31
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.07
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.62
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.85
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C55.90
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I16.69
adrenal gland, embryo E18.CNhs11026.1262-18F57.08
adrenal gland, neonate N00.CNhs11191.1311-23C16.94
adrenal gland, neonate N25.CNhs11223.1377-27I34.52
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F55.18
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.00
cerebellum, neonate N30.CNhs11135.1395-42I213.20
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.41
corpora quadrigemina, adult.CNhs10501.16-22A417.68
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F17.29
cortex, adult.CNhs10473.12-14D514.08
cortex, neonate N30.CNhs11107.1392-42F216.88
diencephalon, adult.CNhs10482.20-12F218.49
diencephalon, neonate N30.CNhs11201.1388-42B215.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.45
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.86
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C64.81
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D44.07
eyeball, neonate N00.CNhs11207.633-15C66.53
eyeball, neonate N01.CNhs11140.1532-43E76.66
eyeball, neonate N02.CNhs11205.1551-44G86.09
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F55.86
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C84.53
heart, embryo E16.CNhs11021.457-17C65.09
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E36.07
heart, neonate N03.CNhs11221.1349-25I27.90
heart, neonate N10.CNhs11118.749-24G15.58
heart, neonate N16.CNhs11209.782-15G15.51
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D35.71
heart, neonate N30.CNhs11202.1390-42D26.58
hippocampus, adult.CNhs10478.13-16E810.51
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D84.51
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F74.76
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F83.77
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G75.68
kidney, neonate N10.CNhs11206.758-6D55.31
kidney, neonate N20.CNhs11113.832-19I15.61
kidney, neonate N25.CNhs11122.1353-25F36.44
kidney, neonate N30.CNhs11203.1385-42H17.16
liver, adult pregnant day01.CNhs10466.508-5B27.11
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D112.54
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E54.10
lung, neonate N07.CNhs11111.715-19A34.65
lung, neonate N10.CNhs11219.750-23E64.78
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C73.80
lung, neonate N30.CNhs11133.1394-42H24.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C222.96
medulla oblongata, neonate N30.CNhs11200.1396-42A318.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.70
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.97
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.91
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I75.68
ovary, embryo E18.CNhs11040.505-44H76.77
ovary, neonate N00.CNhs11217.1299-22I47.66
oviduct, adult pregnant day01.CNhs10500.988-6G66.76
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C73.10
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F57.24
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H32.47
skin, neonate N06.CNhs11097.693-20I53.70
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C921.14
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C15.16
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.87
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G83.86
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A95.29
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I15.05
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F53.89
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G53.69
testis, embryo E17.CNhs11029.486-18I55.04
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B75.52
testis, neonate N07.CNhs11222.726-26I45.34
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I22.47
thymus, embryo E16.CNhs11002.456-26C52.73
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D33.20
thymus, neonate N10.CNhs11194.748-24E42.72
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G72.98
thymus, neonate N30.CNhs11132.1393-42G22.69
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.29
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F56.57
uterus, adult.CNhs10509.92-27E53.85
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F88.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.49
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C28.38
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D16.62
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:115710375..115710458,%2B&oldid=930330"