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FFCP PHASE1:Mm9::chr7:13609469..13609537,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:13609469..13609537,+
|short_description=p3@Trim28
|description=CAGE_peak_3_at_Trim28_5end
|association_with_transcript=0bp_to_ENSMUST00000005705,NM_011588,uc009ffb.2_5end
|EntrezGene=21849
|EntrezGene=21849
|HGNC=
|HGNC=
|UniProt=Q62318,Q5EBP9
|UniProt=Q62318,Q5EBP9
|association_with_transcript=0bp_to_ENSMUST00000005705,NM_011588,uc009ffb.2_5end
|description=CAGE_peak_3_at_Trim28_5end
|id=chr7:13609469..13609537,+
|ontology_enrichment_disease=
|phase1_expression=12.8119077683835,0.348975407639361,0.454999239389536,0.30246421130683,1.00179145989269,8.2260843236826,6.77476657727024,1.03298658753261,1.12630977721333,2.10658073689794,0.34243593645101,0.398860794976682,0.513602189793617,0.437102012094987,3.33109761815663,2.63217847606774,4.89693314689703,0.630924330716475,0.274228867211478,0.42438965179803,5.10259740906419,15.1915155337354,10.4479915655574,3.99981056983517,7.79991555628378,0.57423196411502,1.7230479846363,4.74036711908956,3.23039813075836,4.28451220591882,5.09980174507201,12.7006134691926,15.3766196896143,0,19.3530585233354,17.4546377626417,16.5377178572519,0.418531630736908,0.7813353445238,1.57057123192139,0,0,0.971020706062307,5.28766635497425,4.05507724878058,5.68994931701213,11.7358701652206,5.45062890951116,5.05278220289285,2.72201858703997,4.05960622713551,8.62515386189829,1.51004345451963,0,1.00828139742739,1.28629718017973,1.71920063963254,1.54701627683233,15.9830004079082,19.0436752537932,17.1134478946668,11.8595586224196,2.66788438833342,2.6996991518442,2.96659908770092,0.7104801149461,8.38880309451533,6.91592949578798,21.4637497478549,20.7909145030804,21.8737959805437,7.14127461009509,9.27647871996777,14.6988959057945,19.1690942036473,15.6267193723704,2.20231761998777,4.85211884723713,4.14737639791857,12.1335384711778,13.5401712531566,10.4182674111352,5.58365998002762,6.19038871034848,5.34793867218835,7.95497180778903,6.83384067835694,15.2847545576746,1.8931548333296,3.32514864469856,4.63783181922684,2.58127163094416,0.679971333707751,2.69851595818909,1.29955283489534,0.448026887097336,1.96622188184453,5.11290967734173,6.23486411046885,4.24007489412408,8.30976176682415,1.28326477414318,2.54805239706646,7.11066703153331,3.46385665617943,5.32055717497707,3.0331466700887,1.59857431606684,0.517875767294343,5.34391700633369,21.1652098654686,8.52503339273995,10.1470818792666,6.48107354376277,6.23220147819235,6.91166252313215,0.741584903203122,1.3013942122792,4.42305275974937,7.76480879747564,5.96272099843063,2.42437626567611,5.59175283654366,2.34224637609238,3.77004072264219,5.10914110417183,13.4192939446631,13.7977628128484,12.0716715719411,4.79330046095433,5.49000723382352,10.0523481690292,3.47648640384553,4.85859368927628,5.61027720310812,6.16516799657479,17.2108524907035,3.23458123586242,3.53811861807145,3.15662783829711,30.7084245391981,29.4274693674845,19.8068342785884,15.2211866014072,17.6894897793452,14.476850392188,15.7418897260344,4.13925393182425,47.4249584452253,28.1768059450051,22.6976950171494,19.7276159184817,14.7365042089567,10.0993128291428,6.99659263787008,25.0783176191301,13.3420505589515,10.2939162845886,10.5140494776369,15.1201813950916,11.2572508790926,10.8037236876609,14.678173606283,8.46086196513836,6.63348585415727,5.8133486187602,6.9751084363901,5.7215017759913,4.60767579757745,3.11918181750281,2.35099547682982,3.07019973593198,2.63460138349261,2.81833479396781,6.30869845692382,12.9659811597898,1.32167513193519,2.3800550999719,27.7274725695804,26.0105072483691,13.6599509001419,8.67239155880373,8.2279876222602,11.223311940641,5.21981967698963,4.28217282282428,5.02670417600539,4.57599885694647,5.45899443933536,3.59527763461689,3.45820879799511,2.78797782556114,25.0361629258068,20.5647322697512,12.3978509240388,16.9030602111611,12.412959178728,10.7307804432187,5.81776141543167,1.32849133181642,1.255989822731,2.22114895059241,2.37162101669719,12.5133829287071,12.579775687245,6.2961391467759,6.6943840058206,6.99413763282009,6.3656462945355,2.01387296215567,3.24270453550071,4.3929826110093,20.1275489138296,3.72140947668503,2.80833905803104,2.77836765741823,1.79397413521912,0.964887042726734,0.923765950833023,29.7501516479661,20.5335870316953,17.3139987490692,12.9079636558676,7.87279409976534,4.52282917683426,2.73187107000918,6.14777062014145,5.09368786192182,6.37819074629948,1.80249646187312,1.89953480052485,1.88043776155965,0,0,2.95058563811422,2.48343071674259,4.49541651965817,4.92289083687253,8.52461715958712,1.51482556322624,15.1443945319803,19.1314984705353,13.1408272617007,12.4263774935327,14.704712489438,8.20921939287614,14.9779959619711,9.64444331107329,11.0680577825027,6.10510501201433,7.38088443082997,23.3265940804104,17.5917916101862,6.92874516484649,2.65490276679926,26.220308704738,18.1394134178851,6.60117779145643,10.6308681437078,4.91896236710284,5.68542244970086,7.99774204850512,8.19943970284859,3.79244109522979,1.05418608574999,3.09406629744561,5.7874732978144,21.4272701897259,25.8717367565509,16.289614662401,11.5271151867478,16.4099312193905,13.4930196893739,11.8741330154694,6.10146440965647,2.96564899209348,3.52845436887939,2.4732937941222,4.84393280087717,4.644095219468,5.13301079213487,5.58079059133208,4.37221254944776,4.07935664423121,2.56306321196779,16.5109494370578,7.59297562215818,4.70921142511728,2.59719032669948,3.20289442489132,10.7086410896129,11.6159705428636,9.81219814011409,1.90934123603023,42.072687146291,18.5020715085432,12.2046035128635,10.8725913927524,5.8957892211468,5.66430254816247,6.77758336947755,2.6175594198403,2.20345454596048,1.86401793926078,5.07323644815771,29.3052430246198,32.4298641295911,23.3341426012857,24.4112066372912,19.4299544314395,19.7160160924867,19.1400445720607,13.421996086491,11.8376219204743,7.77681016896237,5.05617793005085,28.9897057864935,20.8503243044599,18.7085985088025,15.0382424360684,13.510332125126,10.5771995577573,10.9290250109187,9.89471209491847,12.65032990473,9.57848758799985,7.21188317474168,8.65906574762965,5.96072201126002,0.680191150845634,7.32553646134413,6.01082839283487,9.56942313275247,2.70465431645067,1.87682475451182,4.39563898241436,6.00231461421384,1.50471631210609,7.34177395402186,6.90487854760765,3.43737308063638,4.64003592327956,4.7955776383945,2.2661816921691,2.02506750069542,8.10578165803597,4.98456649882625,7.24864436452548,33.4195259221049,23.9414924040619,17.2440941811676,10.6966955510049,12.7864029203069,10.2952364732008,8.00088220085815,6.18105171716683,8.3438994493872,5.30664144703975,6.59046179714623,7.1678009726709,5.71213195566283,7.10679191694049,6.37533705407307,7.62069906052918,8.45955579397445,6.17309505483856,7.00546031365621,4.71036544430071,7.88599280486455,4.61437096014278,6.19934093863034,6.39524233182245,5.8347815857505,6.00763716030903,6.0366231048015,3.6829759601298,7.4692262615224,3.92799590160417,6.52492599682958,7.2893316957917,7.36615877705441,5.57772628269478,7.13754460630223,9.242991383704,7.95367468714389,4.29742108096597,4.20834330551455,5.29419405886837,5.56482805489012
|phase1_expression=12.8119077683835,0.348975407639361,0.454999239389536,0.30246421130683,1.00179145989269,8.2260843236826,6.77476657727024,1.03298658753261,1.12630977721333,2.10658073689794,0.34243593645101,0.398860794976682,0.513602189793617,0.437102012094987,3.33109761815663,2.63217847606774,4.89693314689703,0.630924330716475,0.274228867211478,0.42438965179803,5.10259740906419,15.1915155337354,10.4479915655574,3.99981056983517,7.79991555628378,0.57423196411502,1.7230479846363,4.74036711908956,3.23039813075836,4.28451220591882,5.09980174507201,12.7006134691926,15.3766196896143,0,19.3530585233354,17.4546377626417,16.5377178572519,0.418531630736908,0.7813353445238,1.57057123192139,0,0,0.971020706062307,5.28766635497425,4.05507724878058,5.68994931701213,11.7358701652206,5.45062890951116,5.05278220289285,2.72201858703997,4.05960622713551,8.62515386189829,1.51004345451963,0,1.00828139742739,1.28629718017973,1.71920063963254,1.54701627683233,15.9830004079082,19.0436752537932,17.1134478946668,11.8595586224196,2.66788438833342,2.6996991518442,2.96659908770092,0.7104801149461,8.38880309451533,6.91592949578798,21.4637497478549,20.7909145030804,21.8737959805437,7.14127461009509,9.27647871996777,14.6988959057945,19.1690942036473,15.6267193723704,2.20231761998777,4.85211884723713,4.14737639791857,12.1335384711778,13.5401712531566,10.4182674111352,5.58365998002762,6.19038871034848,5.34793867218835,7.95497180778903,6.83384067835694,15.2847545576746,1.8931548333296,3.32514864469856,4.63783181922684,2.58127163094416,0.679971333707751,2.69851595818909,1.29955283489534,0.448026887097336,1.96622188184453,5.11290967734173,6.23486411046885,4.24007489412408,8.30976176682415,1.28326477414318,2.54805239706646,7.11066703153331,3.46385665617943,5.32055717497707,3.0331466700887,1.59857431606684,0.517875767294343,5.34391700633369,21.1652098654686,8.52503339273995,10.1470818792666,6.48107354376277,6.23220147819235,6.91166252313215,0.741584903203122,1.3013942122792,4.42305275974937,7.76480879747564,5.96272099843063,2.42437626567611,5.59175283654366,2.34224637609238,3.77004072264219,5.10914110417183,13.4192939446631,13.7977628128484,12.0716715719411,4.79330046095433,5.49000723382352,10.0523481690292,3.47648640384553,4.85859368927628,5.61027720310812,6.16516799657479,17.2108524907035,3.23458123586242,3.53811861807145,3.15662783829711,30.7084245391981,29.4274693674845,19.8068342785884,15.2211866014072,17.6894897793452,14.476850392188,15.7418897260344,4.13925393182425,47.4249584452253,28.1768059450051,22.6976950171494,19.7276159184817,14.7365042089567,10.0993128291428,6.99659263787008,25.0783176191301,13.3420505589515,10.2939162845886,10.5140494776369,15.1201813950916,11.2572508790926,10.8037236876609,14.678173606283,8.46086196513836,6.63348585415727,5.8133486187602,6.9751084363901,5.7215017759913,4.60767579757745,3.11918181750281,2.35099547682982,3.07019973593198,2.63460138349261,2.81833479396781,6.30869845692382,12.9659811597898,1.32167513193519,2.3800550999719,27.7274725695804,26.0105072483691,13.6599509001419,8.67239155880373,8.2279876222602,11.223311940641,5.21981967698963,4.28217282282428,5.02670417600539,4.57599885694647,5.45899443933536,3.59527763461689,3.45820879799511,2.78797782556114,25.0361629258068,20.5647322697512,12.3978509240388,16.9030602111611,12.412959178728,10.7307804432187,5.81776141543167,1.32849133181642,1.255989822731,2.22114895059241,2.37162101669719,12.5133829287071,12.579775687245,6.2961391467759,6.6943840058206,6.99413763282009,6.3656462945355,2.01387296215567,3.24270453550071,4.3929826110093,20.1275489138296,3.72140947668503,2.80833905803104,2.77836765741823,1.79397413521912,0.964887042726734,0.923765950833023,29.7501516479661,20.5335870316953,17.3139987490692,12.9079636558676,7.87279409976534,4.52282917683426,2.73187107000918,6.14777062014145,5.09368786192182,6.37819074629948,1.80249646187312,1.89953480052485,1.88043776155965,0,0,2.95058563811422,2.48343071674259,4.49541651965817,4.92289083687253,8.52461715958712,1.51482556322624,15.1443945319803,19.1314984705353,13.1408272617007,12.4263774935327,14.704712489438,8.20921939287614,14.9779959619711,9.64444331107329,11.0680577825027,6.10510501201433,7.38088443082997,23.3265940804104,17.5917916101862,6.92874516484649,2.65490276679926,26.220308704738,18.1394134178851,6.60117779145643,10.6308681437078,4.91896236710284,5.68542244970086,7.99774204850512,8.19943970284859,3.79244109522979,1.05418608574999,3.09406629744561,5.7874732978144,21.4272701897259,25.8717367565509,16.289614662401,11.5271151867478,16.4099312193905,13.4930196893739,11.8741330154694,6.10146440965647,2.96564899209348,3.52845436887939,2.4732937941222,4.84393280087717,4.644095219468,5.13301079213487,5.58079059133208,4.37221254944776,4.07935664423121,2.56306321196779,16.5109494370578,7.59297562215818,4.70921142511728,2.59719032669948,3.20289442489132,10.7086410896129,11.6159705428636,9.81219814011409,1.90934123603023,42.072687146291,18.5020715085432,12.2046035128635,10.8725913927524,5.8957892211468,5.66430254816247,6.77758336947755,2.6175594198403,2.20345454596048,1.86401793926078,5.07323644815771,29.3052430246198,32.4298641295911,23.3341426012857,24.4112066372912,19.4299544314395,19.7160160924867,19.1400445720607,13.421996086491,11.8376219204743,7.77681016896237,5.05617793005085,28.9897057864935,20.8503243044599,18.7085985088025,15.0382424360684,13.510332125126,10.5771995577573,10.9290250109187,9.89471209491847,12.65032990473,9.57848758799985,7.21188317474168,8.65906574762965,5.96072201126002,0.680191150845634,7.32553646134413,6.01082839283487,9.56942313275247,2.70465431645067,1.87682475451182,4.39563898241436,6.00231461421384,1.50471631210609,7.34177395402186,6.90487854760765,3.43737308063638,4.64003592327956,4.7955776383945,2.2661816921691,2.02506750069542,8.10578165803597,4.98456649882625,7.24864436452548,33.4195259221049,23.9414924040619,17.2440941811676,10.6966955510049,12.7864029203069,10.2952364732008,8.00088220085815,6.18105171716683,8.3438994493872,5.30664144703975,6.59046179714623,7.1678009726709,5.71213195566283,7.10679191694049,6.37533705407307,7.62069906052918,8.45955579397445,6.17309505483856,7.00546031365621,4.71036544430071,7.88599280486455,4.61437096014278,6.19934093863034,6.39524233182245,5.8347815857505,6.00763716030903,6.0366231048015,3.6829759601298,7.4692262615224,3.92799590160417,6.52492599682958,7.2893316957917,7.36615877705441,5.57772628269478,7.13754460630223,9.242991383704,7.95367468714389,4.29742108096597,4.20834330551455,5.29419405886837,5.56482805489012
|short_description=p3@Trim28
}}
}}

Revision as of 21:55, 18 April 2012

Short description:p3@Trim28
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Trim28_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000005705, NM_011588, uc009ffb.2_5end
EntrezGene:Trim28
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p3@Trim28

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.23
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H215.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I910.45
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.80
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I24.74
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F519.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F617.45
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.06
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.69
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.45
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C315.98
Mouse Granule cells, donor2.CNhs12357.11731-123E319.04
Mouse Granule cells, donor3.CNhs12108.11636-122C717.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C611.86
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C88.39
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.79
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D921.87
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D214.70
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.17
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.54
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.28
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F93.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.31
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D75.34
adrenal gland, embryo E14.CNhs11038.406-44C521.17
adrenal gland, embryo E16.CNhs11004.1254-43D68.53
adrenal gland, embryo E17.CNhs11043.1263-45I110.15
adrenal gland, embryo E18.CNhs11026.1262-18F56.48
adrenal gland, neonate N00.CNhs11191.1311-23C16.23
adrenal gland, neonate N25.CNhs11223.1377-27I36.91
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F57.76
bone (os femoris), neonate N16.CNhs11225.1525-43A65.96
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.42
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.07
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F110.05
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.21
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C630.71
eyeball, embryo E14.CNhs10521.399-16E229.43
eyeball, embryo E15.CNhs10593.426-16C919.81
eyeball, embryo E17.CNhs11023.1261-18D415.22
eyeball, neonate N00.CNhs11207.633-15C617.69
eyeball, neonate N01.CNhs11140.1532-43E714.48
eyeball, neonate N02.CNhs11205.1551-44G815.74
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E247.42
forelimb, embryo E12.CNhs10600.359-14H228.18
forelimb, embryo E13.CNhs10589.384-1E222.70
forelimb, embryo E14.CNhs10577.413-26A819.73
forelimb, embryo E15.CNhs11007.437-20E714.74
forelimb, embryo E17.CNhs10598.1517-43C410.10
forelimb, embryo E18.CNhs11008.1520-43B57.00
gonad, embryo E13.CNhs11044.1564-45I625.08
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C813.34
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D510.51
heart, embryo E11.CNhs10586.331-24E915.12
heart, embryo E12.CNhs11015.353-12F511.26
heart, embryo E13.CNhs11013.376-3I910.80
heart, embryo E14.CNhs10597.403-26D414.68
heart, embryo E15.CNhs11017.431-16C88.46
heart, embryo E16.CNhs11021.457-17C66.63
heart, embryo E17.CNhs11025.479-18E55.81
heart, embryo E18.CNhs11030.1283-20G36.98
heart, neonate N00.CNhs11213.639-21E35.72
heart, neonate N03.CNhs11221.1349-25I24.61
heart, neonate N10.CNhs11118.749-24G13.12
heart, neonate N16.CNhs11209.782-15G12.35
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D22.82
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G112.97
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I527.73
intestine, embryo E13.CNhs11010.381-16D526.01
intestine, embryo E15.CNhs10602.976-16D813.66
intestine, embryo E16.CNhs10585.463-22H48.67
intestine, embryo E17.CNhs10582.482-18D38.23
intestine, embryo E18.CNhs10526.1289-20F711.22
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E33.46
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I925.04
kidney, embryo E15.CNhs10997.434-16F820.56
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I216.90
kidney, embryo E18.CNhs11001.1288-20C712.41
kidney, neonate N00.CNhs11214.646-21G710.73
kidney, neonate N10.CNhs11206.758-6D55.82
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H12.22
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F812.51
liver, embryo E13.CNhs10524.378-3H612.58
liver, embryo E14.CNhs10594.409-16E16.30
liver, embryo E15.CNhs10520.433-16D76.69
liver, embryo E16.CNhs10523.462-17F56.99
liver, embryo E17.CNhs10510.481-18A36.37
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G229.75
lung, embryo E14.CNhs10604.404-26F820.53
lung, embryo E15.CNhs11020.432-17C517.31
lung, embryo E16.CNhs10998.458-17B612.91
lung, embryo E17.CNhs10605.480-44A67.87
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E56.15
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E66.38
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A34.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.52
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.14
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E219.13
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.14
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.70
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.21
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.98
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.07
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I77.38
ovary, embryo E18.CNhs11040.505-44H723.33
ovary, neonate N00.CNhs11217.1299-22I417.59
oviduct, adult pregnant day01.CNhs10500.988-6G66.93
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F426.22
pancreas, embryo E15.CNhs11042.1556-45F218.14
pancreas, embryo E16.CNhs11003.460-26E56.60
pancreas, embryo E17.CNhs10599.1558-45G310.63
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D88.20
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E621.43
pituitary gland, embryo E13.CNhs11009.370-44C725.87
pituitary gland, embryo E14.CNhs11037.398-44A516.29
pituitary gland, embryo E15.CNhs10592.427-16B911.53
pituitary gland, embryo E16.CNhs11036.449-43F616.41
pituitary gland, embryo E17.CNhs11039.1265-44F513.49
pituitary gland, neonate N00.CNhs11190.1308-22E911.87
placenta, adult pregnant day10.CNhs10472.539-13I76.10
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G44.84
skin, neonate N03.CNhs11215.662-22H34.64
skin, neonate N06.CNhs11097.693-20I55.13
skin, neonate N10.CNhs11108.762-6C45.58
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G22.56
spleen, embryo E16.CNhs11035.461-43C116.51
spleen, embryo E18.CNhs11011.1271-21F27.59
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H12.60
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.81
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E342.07
stomach, embryo E15.CNhs10603.1252-16G818.50
stomach, embryo E16.CNhs11022.459-17D412.20
stomach, embryo E17.CNhs11006.1035-18D510.87
stomach, embryo E18.CNhs10999.1286-20C65.90
stomach, neonate N03.CNhs11193.1340-24B85.66
stomach, neonate N07.CNhs11210.718-18A96.78
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F529.31
testis, embryo E15.CNhs11034.443-27C532.43
testis, embryo E16.CNhs11033.470-26G523.33
testis, embryo E17.CNhs11029.486-18I524.41
testis, embryo E18.CNhs11027.503-18G519.43
testis, neonate N00.CNhs11189.1300-22B719.72
testis, neonate N07.CNhs11222.726-26I419.14
testis, neonate N10.CNhs11204.763-44D913.42
testis, neonate N20.CNhs11110.839-18H311.84
testis, neonate N30.CNhs11130.1391-42E27.78
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I428.99
thymus, embryo E15.CNhs11005.430-45I220.85
thymus, embryo E16.CNhs11002.456-26C518.71
thymus, embryo E17.CNhs10581.478-18C115.04
thymus, embryo E18.CNhs10595.1273-19G413.51
thymus, neonate N02.CNhs11181.1541-43F810.58
thymus, neonate N03.CNhs11137.2104-43C710.93
thymus, neonate N06.CNhs11197.681-26C49.89
thymus, neonate N07.CNhs11211.713-19D312.65
thymus, neonate N10.CNhs11194.748-24E49.58
thymus, neonate N20.CNhs11186.820-7A27.21
thymus, neonate N25.CNhs11125.1362-25G78.66
thymus, neonate N30.CNhs11132.1393-42G25.96
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.01
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.57
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E54.40
vagina, adult.CNhs10502.89-27D56.00
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I833.42
whole body, embryo E12.CNhs10587.857-27C923.94
whole body, embryo E13.CNhs10512.372-23H217.24
whole body, embryo E14.5.CNhs10578.420-27D210.70
whole body, embryo E14.CNhs10519.395-14B112.79
whole body, embryo E16.CNhs10514.453-14F210.30
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.17
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.71
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.01
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F97.14
whole body, embryo E17.CNhs10517.475-3I59.24
whole body, embryo E18.CNhs10516.493-3B37.95
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D15.29
whole body, neonate N10.CNhs10518.761-6B45.56





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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