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FFCP PHASE1:Mm9::chr7:13609741..13609770,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:13609741..13609770,+
|short_description=p1@Trim28
|description=CAGE_peak_1_at_Trim28_5end
|association_with_transcript=240bp_to_ENSMUST00000005705,NM_011588,uc009ffb.2_5end
|EntrezGene=21849
|EntrezGene=21849
|HGNC=
|HGNC=
|UniProt=Q62318,Q5EBP9
|UniProt=Q62318,Q5EBP9
|association_with_transcript=240bp_to_ENSMUST00000005705,NM_011588,uc009ffb.2_5end
|description=CAGE_peak_1_at_Trim28_5end
|id=chr7:13609741..13609770,+
|ontology_enrichment_disease=
|phase1_expression=60.8565618998217,31.0588112799031,36.3999391511629,41.4375969490357,41.0734498556005,88.304497025654,72.1863059440174,73.2129243913737,146.98342592634,152.844135688262,85.095330208076,103.384718057956,58.0370474466787,66.002403826343,58.9604278413723,43.5321824888126,67.8575021784302,54.7326856896542,47.5787084611914,58.1413822963301,44.1374675884052,117.75906812425,100.823118607629,36.9582496652769,40.3760334678219,27.563134277521,34.460959692726,41.8014191410625,31.9239344686708,36.29233868543,41.0201444712314,158.122637691448,157.45658562165,142.633512913895,99.0761055746872,91.2628203018123,108.005589462793,18.4153917524239,21.0960543021426,19.8939022710043,14.7057872007754,15.0270006690858,18.4493934151838,39.5316008443313,38.5232338634155,47.9057023141989,119.70587568525,87.2100625521786,54.0428009526801,44.7188767870852,69.8532243910559,74.7513334697852,71.8109553927112,110.255045585724,89.7370443710379,46.5639579225064,41.260815351181,36.097046459421,116.938914376848,145.472519299809,143.245897192396,121.645187012818,115.608323494448,90.8898714454213,109.764166244934,89.5204944832086,121.937244980991,114.112836680502,154.186453502706,152.286698438147,160.057295588402,48.2750163642428,47.0449992226937,146.37650506187,174.822139137263,140.640474351333,27.5289702498472,21.068410784056,21.1977015893616,113.817866311157,110.425585828108,85.4297927713086,24.5681039121215,24.7615548413939,24.4477196442896,66.8806889025226,52.2504068532708,86.8621417545901,50.1307399865678,45.4185076241781,46.6681826809701,31.8356834483113,68.6771047044828,43.7159585226632,22.0923981932207,21.0572636935748,31.1786612692489,55.0489941927127,55.8539909896168,57.2410110706751,62.5344783808461,62.8799739330157,38.2207859559969,7.11066703153331,63.6483660572969,69.1672432747019,66.2237022969366,32.5424057199321,28.4831672011889,37.4074190443358,105.305593347044,56.3261134877461,66.1866477124888,44.9153468846815,45.0364748329749,38.70531012954,30.404981031328,19.2317144703483,68.9996230520902,51.9271588331183,45.9350358397619,48.4875253135222,26.0948465705371,23.1296829639122,36.4437269855412,35.5085306739942,139.105359551373,98.9839506139123,134.059089562083,18.8736205650077,23.33253074375,74.0104133944771,14.7750672163435,18.6672283851141,19.1165000994795,18.9822277789276,84.3229932680619,46.777020949395,35.3811861807145,17.6771158944638,148.857786749333,155.183920492594,119.561254190752,91.3271196084433,86.6104634196404,79.8148477374614,95.2009521526845,25.8703370739016,261.69954342047,172.275639032883,142.520410572799,121.215240032449,81.4678440231002,80.4462504666205,54.1207018752891,157.635139320247,69.5191055440102,69.4839349209731,92.9214643023588,96.7277357740794,80.2079125135349,75.8061278750873,94.4611494984989,59.422797987716,56.3074962038931,50.9249339003393,60.6297887163139,40.5175738014078,47.5577966249959,28.5651387497626,25.7798814355821,27.9241975982385,27.8828646419634,28.0491415209177,20.1878350621562,65.858951922742,15.5296828002385,32.5274196996159,148.448622372523,125.175566132776,94.8464515330607,66.555563125703,62.0434742327188,44.1323452581137,46.0293189698176,46.6098041868951,41.972979869645,40.3881638243536,40.1626019465388,51.2327062932906,35.4466401794499,40.4256784706365,142.81992941767,114.248512609729,107.072348889426,92.661354169618,79.7144722258942,63.8937319200802,47.0479836204474,21.8463019009811,21.9798218977925,34.6746030620259,31.4239784712378,79.4182703208608,76.0683311088096,64.7602883668379,54.3665125321188,69.9413763282009,59.0731976132894,45.1682935797773,47.3434862183103,44.2043875232811,192.649396746655,49.8668869875795,42.4371235435802,32.8352541331245,29.7799706446374,25.0870631108951,29.3757572364901,165.804985299174,146.016618892055,112.8804820405,85.1925601287263,69.6826030957954,53.3217755584671,52.2958176258901,44.9260160702644,39.6421794471307,45.9229733733563,30.3147132224115,33.155516518252,31.8227928879325,46.7452980211744,30.4587182938477,30.4893849271802,34.4920932880916,18.7844190285717,20.74646852682,83.6068221421045,32.5687496093641,96.2300069219583,105.418460960092,110.512203036926,116.377804602893,107.388960907714,98.5106327145137,109.703700153896,99.9515034056687,86.5680233702886,29.8828824272281,57.3437944241405,115.742642383716,87.9589580509311,62.0287662376733,27.8764790513922,153.437362049948,112.162039633923,63.7485169574936,87.114058399828,58.7201132572901,47.0339493566162,57.0747955279684,68.4474966498665,33.1838595832607,21.0837217149998,26.8152412445286,38.469675450178,131.804720830919,151.996453444737,106.739843445733,81.9311879427304,99.1730625867512,69.2751376734929,90.7305548361506,31.9153522966646,33.6812992673474,47.4136055818168,40.5620182236041,42.9495375011109,44.7521902966916,45.1227460331856,33.8130253474826,37.6010279252507,19.8405073151245,45.9642669346224,119.910770286632,73.5222273657755,53.1199048753229,39.9147144945393,55.8218742623915,100.117295266381,107.202812479922,93.5613822655949,26.7307773044232,187.745412190404,105.116164504581,79.1679148223803,62.7264888043406,52.6253778628288,49.7649438159988,46.9471628519908,37.1693437617322,31.6260534831975,18.6401793926078,43.4043562786827,148.768963313759,154.372771596472,108.309311907635,115.081402718658,78.7335544787026,91.0692171891051,90.1014343120135,73.2966817535719,64.9861285021956,40.0361708698433,69.5224465381992,166.234676537935,139.892323658495,120.436602900416,126.929927228244,108.480019710571,94.9544051207754,86.3983733971277,83.7011870070144,89.6192046262798,85.0973002554934,75.3349418118286,89.3808008838661,72.6974331569359,20.405734525369,109.661060966788,108.194911071028,76.7232696783839,37.8651604303093,32.6567507285057,53.1139710375069,49.7334639463433,41.1289125308998,22.0253218620656,17.9526842237799,25.2074025913335,16.1541991403066,17.1270629942661,18.1294535373528,18.2256075062588,20.2644541450899,15.8599843144472,18.6393712230655,171.145336166307,135.668456956351,113.879315038007,67.826774062054,87.4086888158686,72.4343423293056,50.0055137553634,54.8053252255459,42.3613356661196,49.5286535057043,49.681942778487,46.4020799809747,45.9779801677123,46.8023864079594,50.3134708051172,51.916012349855,45.4266557703833,47.2627590136077,58.1041120132662,55.199595050399,46.2873490720311,45.4338063767904,42.6800780005704,49.127088821727,52.7012530325851,47.1303365956638,45.9149211910659,43.9326418101198,46.5808110491306,46.5748085475923,53.0298531015058,48.956727740655,38.8769491011205,39.9737050259792,49.5769990221533,82.1876801415842,49.3595693819812,42.7593397556114,45.144046368247,43.235918147425,34.084571836202
|phase1_expression=60.8565618998217,31.0588112799031,36.3999391511629,41.4375969490357,41.0734498556005,88.304497025654,72.1863059440174,73.2129243913737,146.98342592634,152.844135688262,85.095330208076,103.384718057956,58.0370474466787,66.002403826343,58.9604278413723,43.5321824888126,67.8575021784302,54.7326856896542,47.5787084611914,58.1413822963301,44.1374675884052,117.75906812425,100.823118607629,36.9582496652769,40.3760334678219,27.563134277521,34.460959692726,41.8014191410625,31.9239344686708,36.29233868543,41.0201444712314,158.122637691448,157.45658562165,142.633512913895,99.0761055746872,91.2628203018123,108.005589462793,18.4153917524239,21.0960543021426,19.8939022710043,14.7057872007754,15.0270006690858,18.4493934151838,39.5316008443313,38.5232338634155,47.9057023141989,119.70587568525,87.2100625521786,54.0428009526801,44.7188767870852,69.8532243910559,74.7513334697852,71.8109553927112,110.255045585724,89.7370443710379,46.5639579225064,41.260815351181,36.097046459421,116.938914376848,145.472519299809,143.245897192396,121.645187012818,115.608323494448,90.8898714454213,109.764166244934,89.5204944832086,121.937244980991,114.112836680502,154.186453502706,152.286698438147,160.057295588402,48.2750163642428,47.0449992226937,146.37650506187,174.822139137263,140.640474351333,27.5289702498472,21.068410784056,21.1977015893616,113.817866311157,110.425585828108,85.4297927713086,24.5681039121215,24.7615548413939,24.4477196442896,66.8806889025226,52.2504068532708,86.8621417545901,50.1307399865678,45.4185076241781,46.6681826809701,31.8356834483113,68.6771047044828,43.7159585226632,22.0923981932207,21.0572636935748,31.1786612692489,55.0489941927127,55.8539909896168,57.2410110706751,62.5344783808461,62.8799739330157,38.2207859559969,7.11066703153331,63.6483660572969,69.1672432747019,66.2237022969366,32.5424057199321,28.4831672011889,37.4074190443358,105.305593347044,56.3261134877461,66.1866477124888,44.9153468846815,45.0364748329749,38.70531012954,30.404981031328,19.2317144703483,68.9996230520902,51.9271588331183,45.9350358397619,48.4875253135222,26.0948465705371,23.1296829639122,36.4437269855412,35.5085306739942,139.105359551373,98.9839506139123,134.059089562083,18.8736205650077,23.33253074375,74.0104133944771,14.7750672163435,18.6672283851141,19.1165000994795,18.9822277789276,84.3229932680619,46.777020949395,35.3811861807145,17.6771158944638,148.857786749333,155.183920492594,119.561254190752,91.3271196084433,86.6104634196404,79.8148477374614,95.2009521526845,25.8703370739016,261.69954342047,172.275639032883,142.520410572799,121.215240032449,81.4678440231002,80.4462504666205,54.1207018752891,157.635139320247,69.5191055440102,69.4839349209731,92.9214643023588,96.7277357740794,80.2079125135349,75.8061278750873,94.4611494984989,59.422797987716,56.3074962038931,50.9249339003393,60.6297887163139,40.5175738014078,47.5577966249959,28.5651387497626,25.7798814355821,27.9241975982385,27.8828646419634,28.0491415209177,20.1878350621562,65.858951922742,15.5296828002385,32.5274196996159,148.448622372523,125.175566132776,94.8464515330607,66.555563125703,62.0434742327188,44.1323452581137,46.0293189698176,46.6098041868951,41.972979869645,40.3881638243536,40.1626019465388,51.2327062932906,35.4466401794499,40.4256784706365,142.81992941767,114.248512609729,107.072348889426,92.661354169618,79.7144722258942,63.8937319200802,47.0479836204474,21.8463019009811,21.9798218977925,34.6746030620259,31.4239784712378,79.4182703208608,76.0683311088096,64.7602883668379,54.3665125321188,69.9413763282009,59.0731976132894,45.1682935797773,47.3434862183103,44.2043875232811,192.649396746655,49.8668869875795,42.4371235435802,32.8352541331245,29.7799706446374,25.0870631108951,29.3757572364901,165.804985299174,146.016618892055,112.8804820405,85.1925601287263,69.6826030957954,53.3217755584671,52.2958176258901,44.9260160702644,39.6421794471307,45.9229733733563,30.3147132224115,33.155516518252,31.8227928879325,46.7452980211744,30.4587182938477,30.4893849271802,34.4920932880916,18.7844190285717,20.74646852682,83.6068221421045,32.5687496093641,96.2300069219583,105.418460960092,110.512203036926,116.377804602893,107.388960907714,98.5106327145137,109.703700153896,99.9515034056687,86.5680233702886,29.8828824272281,57.3437944241405,115.742642383716,87.9589580509311,62.0287662376733,27.8764790513922,153.437362049948,112.162039633923,63.7485169574936,87.114058399828,58.7201132572901,47.0339493566162,57.0747955279684,68.4474966498665,33.1838595832607,21.0837217149998,26.8152412445286,38.469675450178,131.804720830919,151.996453444737,106.739843445733,81.9311879427304,99.1730625867512,69.2751376734929,90.7305548361506,31.9153522966646,33.6812992673474,47.4136055818168,40.5620182236041,42.9495375011109,44.7521902966916,45.1227460331856,33.8130253474826,37.6010279252507,19.8405073151245,45.9642669346224,119.910770286632,73.5222273657755,53.1199048753229,39.9147144945393,55.8218742623915,100.117295266381,107.202812479922,93.5613822655949,26.7307773044232,187.745412190404,105.116164504581,79.1679148223803,62.7264888043406,52.6253778628288,49.7649438159988,46.9471628519908,37.1693437617322,31.6260534831975,18.6401793926078,43.4043562786827,148.768963313759,154.372771596472,108.309311907635,115.081402718658,78.7335544787026,91.0692171891051,90.1014343120135,73.2966817535719,64.9861285021956,40.0361708698433,69.5224465381992,166.234676537935,139.892323658495,120.436602900416,126.929927228244,108.480019710571,94.9544051207754,86.3983733971277,83.7011870070144,89.6192046262798,85.0973002554934,75.3349418118286,89.3808008838661,72.6974331569359,20.405734525369,109.661060966788,108.194911071028,76.7232696783839,37.8651604303093,32.6567507285057,53.1139710375069,49.7334639463433,41.1289125308998,22.0253218620656,17.9526842237799,25.2074025913335,16.1541991403066,17.1270629942661,18.1294535373528,18.2256075062588,20.2644541450899,15.8599843144472,18.6393712230655,171.145336166307,135.668456956351,113.879315038007,67.826774062054,87.4086888158686,72.4343423293056,50.0055137553634,54.8053252255459,42.3613356661196,49.5286535057043,49.681942778487,46.4020799809747,45.9779801677123,46.8023864079594,50.3134708051172,51.916012349855,45.4266557703833,47.2627590136077,58.1041120132662,55.199595050399,46.2873490720311,45.4338063767904,42.6800780005704,49.127088821727,52.7012530325851,47.1303365956638,45.9149211910659,43.9326418101198,46.5808110491306,46.5748085475923,53.0298531015058,48.956727740655,38.8769491011205,39.9737050259792,49.5769990221533,82.1876801415842,49.3595693819812,42.7593397556114,45.144046368247,43.235918147425,34.084571836202
|short_description=p1@Trim28
}}
}}

Revision as of 21:55, 18 April 2012

Short description:p1@Trim28
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trim28_5end
Coexpression cluster:NA
Association with transcript: 240bp_to_ENSMUST00000005705, NM_011588, uc009ffb.2_5end
EntrezGene:Trim28
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Trim28

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G760.86
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I531.06
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I636.40
CD326+ enterocyte, pool1.CNhs13542.11848-124I341.44
CD326+ enterocyte, pool2.CNhs13197.11849-124I441.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I788.30
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I872.19
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E973.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7146.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2152.84
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E685.10
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1103.38
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E458.04
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E866.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A158.96
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A343.53
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A567.86
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A254.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A447.58
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A658.14
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A344.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2117.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9100.82
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D136.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D240.38
GP2+ M cell, pool1.CNhs13228.11845-124H927.56
GP2+ M cell, pool2.CNhs13231.11846-124I134.46
GP2+ M cell, pool3.CNhs13240.11847-124I241.80
Ileum epithelium, pool1.CNhs13199.10252-104B931.92
Ileum epithelium, pool2.CNhs13232.10253-104C136.29
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C841.02
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3158.12
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6157.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9142.63
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F599.08
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F691.26
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7108.01
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G818.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H121.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H319.89
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.03
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H418.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D839.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D938.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B347.91
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7119.71
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C287.21
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B854.04
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C344.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C469.85
Mouse Astrocytes, donor3.CNhs12107.11633-122C474.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A271.81
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9110.26
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A189.74
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C146.56
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E141.26
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C536.10
Mouse Granule cells, donor1.CNhs12131.11713-123C3116.94
Mouse Granule cells, donor2.CNhs12357.11731-123E3145.47
Mouse Granule cells, donor3.CNhs12108.11636-122C7143.25
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6121.65
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1115.61
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C790.89
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7109.76
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D289.52
Mouse Microglia, donor1.CNhs12629.11718-123C8121.94
Mouse Microglia, donor2.CNhs12634.11736-123E8114.11
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5154.19
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5152.29
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9160.06
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F148.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D547.04
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2146.38
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2174.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6140.64
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D327.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4113.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4110.43
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D885.43
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.57
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E524.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I624.45
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D666.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F652.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E186.86
Mouse Schwann, donor1.CNhs12507.11728-123D950.13
Mouse Schwann, donor2.CNhs12573.11746-123F945.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G346.67
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F731.84
Mouse hepatocyte, donor1.CNhs13078.11714-123C468.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C843.72
Mouse hepatocyte, donor6.CNhs13090.11822-124F422.09
Mouse hepatocyte, donor8.CNhs13091.11824-124F621.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A731.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I755.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E355.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I857.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G662.53
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H162.88
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I838.22
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G163.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G269.17
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G366.22
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B632.54
accessory axillary lymph node, adult.CNhs10475.1063-29H928.48
adrenal gland, adult.CNhs10508.49-24D737.41
adrenal gland, embryo E14.CNhs11038.406-44C5105.31
adrenal gland, embryo E16.CNhs11004.1254-43D656.33
adrenal gland, embryo E17.CNhs11043.1263-45I166.19
adrenal gland, embryo E18.CNhs11026.1262-18F544.92
adrenal gland, neonate N00.CNhs11191.1311-23C145.04
adrenal gland, neonate N25.CNhs11223.1377-27I338.71
amnion, adult pregnant day17.5.CNhs10488.583-22A830.40
aorta, adult.CNhs10498.46-23H119.23
bone (os femoris), adult.CNhs10483.56-12G269.00
bone (os femoris), neonate N02.CNhs11227.1985-43F551.93
bone (os femoris), neonate N16.CNhs11225.1525-43A645.94
bone (os femoris), neonate N20.CNhs11195.1350-25C348.49
cecum, adult.CNhs10467.37-13H426.09
cerebellum, adult.CNhs10494.15-8B223.13
cerebellum, neonate N30.CNhs11135.1395-42I236.44
colon, adult.CNhs10468.36-18H735.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7139.11
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D198.98
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4134.06
corpora quadrigemina, adult.CNhs10501.16-22A418.87
corpus striatum, adult.CNhs10487.19-21D823.33
corpus striatum, neonate N00.CNhs11226.630-43F174.01
cortex, adult.CNhs10473.12-14D514.78
cortex, neonate N30.CNhs11107.1392-42F218.67
diencephalon, adult.CNhs10482.20-12F219.12
diencephalon, neonate N30.CNhs11201.1388-42B218.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B184.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A246.78
epididymis, adult.CNhs10490.58-23B235.38
eyeball, adult.CNhs10484.31-12G417.68
eyeball, embryo E12.CNhs11016.345-16C6148.86
eyeball, embryo E14.CNhs10521.399-16E2155.18
eyeball, embryo E15.CNhs10593.426-16C9119.56
eyeball, embryo E17.CNhs11023.1261-18D491.33
eyeball, neonate N00.CNhs11207.633-15C686.61
eyeball, neonate N01.CNhs11140.1532-43E779.81
eyeball, neonate N02.CNhs11205.1551-44G895.20
eyeball, neonate N16.CNhs11188.777-19A225.87
forelimb, embryo E11.CNhs10596.335-25E2261.70
forelimb, embryo E12.CNhs10600.359-14H2172.28
forelimb, embryo E13.CNhs10589.384-1E2142.52
forelimb, embryo E14.CNhs10577.413-26A8121.22
forelimb, embryo E15.CNhs11007.437-20E781.47
forelimb, embryo E17.CNhs10598.1517-43C480.45
forelimb, embryo E18.CNhs11008.1520-43B554.12
gonad, embryo E13.CNhs11044.1564-45I6157.64
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C869.52
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D269.48
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D592.92
heart, embryo E11.CNhs10586.331-24E996.73
heart, embryo E12.CNhs11015.353-12F580.21
heart, embryo E13.CNhs11013.376-3I975.81
heart, embryo E14.CNhs10597.403-26D494.46
heart, embryo E15.CNhs11017.431-16C859.42
heart, embryo E16.CNhs11021.457-17C656.31
heart, embryo E17.CNhs11025.479-18E550.92
heart, embryo E18.CNhs11030.1283-20G360.63
heart, neonate N00.CNhs11213.639-21E340.52
heart, neonate N03.CNhs11221.1349-25I247.56
heart, neonate N10.CNhs11118.749-24G128.57
heart, neonate N16.CNhs11209.782-15G125.78
heart, neonate N20.CNhs11127.821-26I627.92
heart, neonate N25.CNhs11196.1351-25D327.88
heart, neonate N30.CNhs11202.1390-42D228.05
hippocampus, adult.CNhs10478.13-16E820.19
hippocampus, neonate N00.CNhs11228.627-43G165.86
intestinal mucosa, adult.CNhs10506.860-29I315.53
intestine, adult.CNhs10496.178-9A332.53
intestine, embryo E12.CNhs11019.1251-16I5148.45
intestine, embryo E13.CNhs11010.381-16D5125.18
intestine, embryo E15.CNhs10602.976-16D894.85
intestine, embryo E16.CNhs10585.463-22H466.56
intestine, embryo E17.CNhs10582.482-18D362.04
intestine, embryo E18.CNhs10526.1289-20F744.13
intestine, neonate N00.CNhs11126.644-26D146.03
intestine, neonate N01.CNhs11192.1322-23E946.61
intestine, neonate N06.CNhs11102.688-20B841.97
intestine, neonate N07.CNhs11095.720-20F240.39
intestine, neonate N10.CNhs11098.755-23A540.16
intestine, neonate N20.CNhs11187.827-18D151.23
intestine, neonate N25.CNhs11121.1352-25E335.45
intestine, neonate N30.CNhs11131.1384-42G140.43
kidney, embryo E14.CNhs10606.411-4I9142.82
kidney, embryo E15.CNhs10997.434-16F8114.25
kidney, embryo E16.CNhs10584.464-22A5107.07
kidney, embryo E17.CNhs11028.483-18I292.66
kidney, embryo E18.CNhs11001.1288-20C779.71
kidney, neonate N00.CNhs11214.646-21G763.89
kidney, neonate N10.CNhs11206.758-6D547.05
kidney, neonate N20.CNhs11113.832-19I121.85
kidney, neonate N25.CNhs11122.1353-25F321.98
kidney, neonate N30.CNhs11203.1385-42H134.67
liver, adult pregnant day01.CNhs10466.508-5B231.42
liver, embryo E12.CNhs10601.355-15F879.42
liver, embryo E13.CNhs10524.378-3H676.07
liver, embryo E14.CNhs10594.409-16E164.76
liver, embryo E15.CNhs10520.433-16D754.37
liver, embryo E16.CNhs10523.462-17F569.94
liver, embryo E17.CNhs10510.481-18A359.07
liver, embryo E18.CNhs10579.499-43G445.17
liver, neonate N00.CNhs11117.641-24F447.34
liver, neonate N03.CNhs11123.1345-25G244.20
liver, neonate N06.CNhs11101.684-20A8192.65
liver, neonate N07.CNhs11103.716-20H249.87
liver, neonate N10.CNhs11115.751-24B942.44
liver, neonate N20.CNhs11220.823-25A332.84
liver, neonate N25.CNhs11198.1368-26H129.78
liver, neonate N30.CNhs11106.1382-42D125.09
lung, adult.CNhs10474.28-22B129.38
lung, embryo E12.CNhs10522.354-16G2165.80
lung, embryo E14.CNhs10604.404-26F8146.02
lung, embryo E15.CNhs11020.432-17C5112.88
lung, embryo E16.CNhs10998.458-17B685.19
lung, embryo E17.CNhs10605.480-44A669.68
lung, embryo E18.CNhs10583.1287-20I653.32
lung, neonate N00.CNhs11224.640-42C652.30
lung, neonate N06.CNhs11212.683-20E544.93
lung, neonate N07.CNhs11111.715-19A339.64
lung, neonate N10.CNhs11219.750-23E645.92
lung, neonate N20.CNhs11109.822-18A430.31
lung, neonate N25.CNhs11119.1359-25C733.16
lung, neonate N30.CNhs11133.1394-42H231.82
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A146.75
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A130.46
mammary gland, adult lactating day02.CNhs10480.595-22B630.49
mammary gland, adult pregnant day19.CNhs10476.588-5H234.49
medulla oblongata, adult.CNhs10477.17-12C218.78
medulla oblongata, neonate N30.CNhs11200.1396-42A320.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C783.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C232.57
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E196.23
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2105.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3110.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7116.38
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8107.39
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D998.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4109.70
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D599.95
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D686.57
olfactory brain, adult.CNhs10489.18-22I929.88
ovary, adult.CNhs10507.91-2I757.34
ovary, embryo E18.CNhs11040.505-44H7115.74
ovary, neonate N00.CNhs11217.1299-22I487.96
oviduct, adult pregnant day01.CNhs10500.988-6G662.03
pancreas, adult.CNhs10486.34-16E427.88
pancreas, embryo E14.CNhs11012.405-44F4153.44
pancreas, embryo E15.CNhs11042.1556-45F2112.16
pancreas, embryo E16.CNhs11003.460-26E563.75
pancreas, embryo E17.CNhs10599.1558-45G387.11
pancreas, embryo E18.CNhs10580.1535-43I758.72
pancreas, neonate N00.CNhs11105.645-26G947.03
pancreas, neonate N01.CNhs11138.1531-43D757.07
pancreas, neonate N02.CNhs11139.1539-43D868.45
pancreas, neonate N16.CNhs11136.787-43B633.18
pancreas, neonate N25.CNhs11094.1555-45E221.08
pancreas, neonate N30.CNhs11182.1548-44H526.82
pituitary gland, adult.CNhs10493.21-1G838.47
pituitary gland, embryo E12.CNhs11018.346-16E6131.80
pituitary gland, embryo E13.CNhs11009.370-44C7152.00
pituitary gland, embryo E14.CNhs11037.398-44A5106.74
pituitary gland, embryo E15.CNhs10592.427-16B981.93
pituitary gland, embryo E16.CNhs11036.449-43F699.17
pituitary gland, embryo E17.CNhs11039.1265-44F569.28
pituitary gland, neonate N00.CNhs11190.1308-22E990.73
placenta, adult pregnant day10.CNhs10472.539-13I731.92
placenta, adult pregnant day17.CNhs10464.577-18G333.68
prostate, adult.CNhs10470.859-1F847.41
skin, adult.CNhs10492.30-1C340.56
skin, neonate N00.CNhs11124.650-25G442.95
skin, neonate N03.CNhs11215.662-22H344.75
skin, neonate N06.CNhs11097.693-20I545.12
skin, neonate N10.CNhs11108.762-6C433.81
small intestine, neonate N16.CNhs11114.790-21I137.60
spinal cord, adult.CNhs10505.24-13C919.84
spleen, adult.CNhs10465.25-2G245.96
spleen, embryo E16.CNhs11035.461-43C1119.91
spleen, embryo E18.CNhs11011.1271-21F273.52
spleen, neonate N10.CNhs11116.752-24D153.12
spleen, neonate N20.CNhs11112.824-19H139.91
spleen, neonate N25.CNhs11099.1354-25G355.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6100.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9107.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D393.56
stomach, adult.CNhs10503.33-1H626.73
stomach, embryo E12.CNhs10588.356-43E3187.75
stomach, embryo E15.CNhs10603.1252-16G8105.12
stomach, embryo E16.CNhs11022.459-17D479.17
stomach, embryo E17.CNhs11006.1035-18D562.73
stomach, embryo E18.CNhs10999.1286-20C652.63
stomach, neonate N03.CNhs11193.1340-24B849.76
stomach, neonate N07.CNhs11210.718-18A946.95
stomach, neonate N25.CNhs11104.1355-25E437.17
stomach, neonate N30.CNhs11134.1386-42I131.63
submandibular gland, adult.CNhs10469.59-29C118.64
testis, adult.CNhs10504.57-7G543.40
testis, embryo E13.CNhs11031.389-23F5148.77
testis, embryo E15.CNhs11034.443-27C5154.37
testis, embryo E16.CNhs11033.470-26G5108.31
testis, embryo E17.CNhs11029.486-18I5115.08
testis, embryo E18.CNhs11027.503-18G578.73
testis, neonate N00.CNhs11189.1300-22B791.07
testis, neonate N07.CNhs11222.726-26I490.10
testis, neonate N10.CNhs11204.763-44D973.30
testis, neonate N20.CNhs11110.839-18H364.99
testis, neonate N30.CNhs11130.1391-42E240.04
thymus, adult.CNhs10471.38-12B569.52
thymus, embryo E14.CNhs11041.402-44I4166.23
thymus, embryo E15.CNhs11005.430-45I2139.89
thymus, embryo E16.CNhs11002.456-26C5120.44
thymus, embryo E17.CNhs10581.478-18C1126.93
thymus, embryo E18.CNhs10595.1273-19G4108.48
thymus, neonate N02.CNhs11181.1541-43F894.95
thymus, neonate N03.CNhs11137.2104-43C786.40
thymus, neonate N06.CNhs11197.681-26C483.70
thymus, neonate N07.CNhs11211.713-19D389.62
thymus, neonate N10.CNhs11194.748-24E485.10
thymus, neonate N20.CNhs11186.820-7A275.33
thymus, neonate N25.CNhs11125.1362-25G789.38
thymus, neonate N30.CNhs11132.1393-42G272.70
tongue, adult.CNhs10499.32-1B420.41
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3109.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7108.19
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G576.72
urinary bladder, adult.CNhs10481.879-12E437.87
uterus, adult pregnant day19.CNhs10497.590-15F532.66
uterus, adult.CNhs10509.92-27E553.11
vagina, adult.CNhs10502.89-27D549.73
vesicular gland, adult.CNhs10491.51-27F841.13
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.95
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.21
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.15
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.86
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.64
whole body, embryo E11.CNhs11014.324-5I8171.15
whole body, embryo E12.CNhs10587.857-27C9135.67
whole body, embryo E13.CNhs10512.372-23H2113.88
whole body, embryo E14.5.CNhs10578.420-27D267.83
whole body, embryo E14.CNhs10519.395-14B187.41
whole body, embryo E16.CNhs10514.453-14F272.43
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G550.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G554.81
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G542.36
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G549.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G549.68
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G546.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G545.98
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G546.80
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G550.31
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G551.92
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G545.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G547.26
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G558.10
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G555.20
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G546.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G545.43
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G542.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G549.13
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G552.70
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G547.13
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G545.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G543.93
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G546.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G546.57
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G553.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G548.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G538.88
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G539.97
whole body, embryo E17.5.CNhs10513.490-9F949.58
whole body, embryo E17.CNhs10517.475-3I582.19
whole body, embryo E18.CNhs10516.493-3B349.36
whole body, neonate N00.CNhs10525.657-19C242.76
whole body, neonate N01.CNhs10576.659-23C645.14
whole body, neonate N06.CNhs10515.692-21D143.24
whole body, neonate N10.CNhs10518.761-6B434.08





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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