Personal tools

FFCP PHASE1:Mm9::chr5:31357139..31357182,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Cad_5end
|description=CAGE_peak_1_at_Cad_5end
|id=chr5:31357139..31357182,+
|id=chr5:31357139..31357182,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=17.9366708757369,0.348975407639361,0.909998478779072,0,3.00537437967808,7.89032577985882,14.2503710763271,16.7860320474049,20.27357598984,20.5976783163354,70.199366972457,72.3533482087701,17.2912737230518,18.5331253128274,48.9671349869024,31.7886169802027,41.2741508095607,22.3978137404349,26.4630856859076,21.2194825899015,11.5658874605455,23.7305373370116,19.8511839745591,12.7993938234725,9.40578052375397,3.44539178469012,7.75371593086335,6.67960821326256,5.70070258369122,8.06496415231778,9.97787297948871,235.596379853523,199.280991177401,158.481681015439,20.2196133825892,24.1040235769814,21.4377824075488,2.92972141515835,1.5626706890476,3.14114246384279,2.35292595212406,3.41522742479223,0.971020706062307,20.0175940581168,15.6120474078052,15.9685674380663,32.8604364626176,31.8316728315452,14.7189742432096,18.2764105129826,30.6570263359544,56.0635001023389,22.1473039996212,26.8383992544197,42.3478186919505,12.6057123657614,17.4785398362642,12.8918023069361,21.8501777728366,26.4495489636016,22.8179305262225,55.5705032593377,64.9185201161132,18.8978940629094,29.6659908770092,24.8668040231135,36.8508135937638,25.7426264565442,26.4408511386618,27.6762173579966,32.3900440481128,19.7099179238624,18.7738259808871,25.9680494335703,25.7824317039056,45.041720543891,20.9220173898839,8.55505165170758,13.5173749265494,19.5191705840687,19.5783557309157,18.7528813400434,10.6089539620525,12.380777420697,12.2238598221448,28.2843442054721,22.9218406086556,20.5039390407831,24.1566556732857,15.492169821891,10.4351215932604,6.0229671388697,13.599426674155,10.7940638327563,10.3964226791627,4.03224198387602,9.12888730856387,12.6118438707763,10.3914401841148,11.3068663843309,20.4222958676187,14.115912515575,22.9324715735981,42.6640021891999,22.5150682651663,29.8964641260616,24.2651733607096,7.19358442230078,15.5362730188303,16.3286352971307,30.8803881643722,22.5304453950985,16.8349312996923,9.94769427647309,6.93773372100658,9.04799457573663,3.46072954828123,14.6045350489111,28.307537662396,23.7797269422691,15.9005893291483,23.7588874036259,13.0474232852686,13.4679166625312,8.16842156572475,12.2619386500124,24.08284002569,17.3971791988088,20.5853767858365,11.833460512981,7.77751024791665,15.0785222535437,6.60532416730651,4.09144731728529,9.14267396062064,7.78758062725237,16.5998163076016,17.6657898266332,30.0740082536073,9.04899980311838,32.5301107406759,26.6686441142829,27.9096301198291,25.6198190320716,18.0296722751019,22.2917873295639,23.0506242416933,11.6416516832557,50.0117743604194,36.3083673922213,37.4775894469211,30.6874025398605,25.0242524303038,26.8154168222068,24.2822920961373,32.4425854914144,21.066395619397,24.9627469901274,22.1647529528562,30.4474885627188,22.9835538781474,17.8261440846405,30.7768156260773,16.9217239302767,15.7352455145126,9.53389173476672,16.3646774853768,7.00592054203017,13.4939076929054,8.53670813211295,7.05298643048945,11.1111990443253,13.173006917463,5.09984391289413,7.36014819974445,12.4514580978934,5.28670052774077,20.0982430664294,31.5666610792146,29.9585306699966,34.4076121729989,21.781820659321,17.3454874198999,15.4082757151173,12.8122846617018,11.6936257854048,11.5614196048124,8.55512829776949,16.5719474051252,11.6846523125049,10.8069024937347,8.16479220342906,31.6745394591646,33.70331121987,34.9393980586549,26.8819752755815,21.7226785627741,16.9728684134571,13.5958554817153,8.41377843483732,8.16393384775149,4.56569506510662,11.5616524563988,50.5540670319765,57.0021085828289,44.2978361398162,37.123402214096,37.3824597616246,28.0088436959562,25.0295639582205,9.40384315295205,17.8464918572253,14.3768206527355,10.4199465347181,14.6657706363843,11.8712072635143,14.5311904952749,5.30687873499704,12.9327233116623,39.9826878835723,42.5338588513688,27.1592137240301,19.7139808562342,15.410575684647,11.1880511216426,5.85400943573396,15.4482441224067,11.0732344824387,12.437471955284,9.83179888294428,13.4694285855399,5.64131328467895,13.5712155545345,10.8781136763742,15.2446924635901,17.3840150171981,9.47248480927973,9.25972324078405,28.8525503862949,4.03953483526997,29.9732808445444,31.2350995437311,21.3269163755471,34.1725381072149,27.8498342602993,28.8738061404609,28.7415598189175,30.9791209385991,27.6701444562566,10.2822821254978,22.1426532924899,28.4904965867608,17.4289046508326,18.9715641418416,27.8764790513922,37.8737792401771,38.9997388484529,44.3221937426361,52.8590388256583,39.0442637888788,21.7079766261306,37.0804404067056,43.492680162936,36.3442271626188,46.3841877729995,22.6898195146011,19.4050575279659,25.7487364464774,24.5781499187234,22.2910516432856,19.5074257006501,23.0095774706671,19.2522354104482,16.4411072521884,20.4164386015428,13.7690846061483,21.1707262132763,14.6748765117917,12.4327608555847,21.4714012744235,24.8294475526524,23.6362895632888,12.5336759750836,12.9797711407357,34.8576596827619,36.1177018935639,31.1126805981116,30.8924269487693,32.669920425325,30.4274970364675,23.457023339152,20.7128149439014,23.493995546752,1.90934123603023,42.2308551430816,28.8713643320125,21.7090735051821,22.5815359695626,19.2159056096636,17.5323650300267,13.9684340175818,15.9671124610258,6.22151871800606,16.776161453347,12.9649375897364,40.0704343397863,40.0409546906176,32.8622508301441,32.677435339866,26.0192433255798,20.1854450470697,27.0825120475416,35.8618957935931,11.5960377996483,17.8578603879877,20.2247117202034,48.6540516696394,38.0030541509861,46.251812980095,33.2989653941516,28.0140710241584,27.6449533895928,23.3349452935832,17.8710616408221,21.49031947671,19.1569751759997,16.9576712487169,18.0878262283819,8.2982600548914,14.7374749349887,74.3652943803117,87.4710101942388,69.8400004074566,13.9096507703177,18.9559300205694,15.5678880627175,21.2224695288275,19.0597399533438,5.64751842617067,7.36520378411483,5.15605962095457,9.79563139359019,11.6464028361009,9.06472676867641,6.07520250208625,12.158672487054,14.0474146785103,7.7664046762773,31.6551410131739,27.9317411380722,34.8296555738434,30.3883396335368,37.9399824356648,26.8411522337021,22.8914129635664,18.9552252659783,19.5760717851007,24.0062351175608,20.2783439912192,20.5602712110823,16.8554713445788,17.6069169113391,17.230640686684,17.6228665774737,16.2238056322798,17.5547390621972,16.4834360321323,17.3694725758589,14.7433778525729,17.0376773912964,12.3986818772607,18.3136484956734,17.8807822789128,20.6459643255691,17.9269413415317,19.2040889349625,19.5557923938041,18.5176949647054,16.7275375555086,14.677167873959,20.8707832016542,19.9868525129896,21.0268205969444,27.9787847290499,24.7967504952133,15.2558448374292,11.0947232599929,21.838550492832,19.4768981921154
|phase1_expression=17.9366708757369,0.348975407639361,0.909998478779072,0,3.00537437967808,7.89032577985882,14.2503710763271,16.7860320474049,20.27357598984,20.5976783163354,70.199366972457,72.3533482087701,17.2912737230518,18.5331253128274,48.9671349869024,31.7886169802027,41.2741508095607,22.3978137404349,26.4630856859076,21.2194825899015,11.5658874605455,23.7305373370116,19.8511839745591,12.7993938234725,9.40578052375397,3.44539178469012,7.75371593086335,6.67960821326256,5.70070258369122,8.06496415231778,9.97787297948871,235.596379853523,199.280991177401,158.481681015439,20.2196133825892,24.1040235769814,21.4377824075488,2.92972141515835,1.5626706890476,3.14114246384279,2.35292595212406,3.41522742479223,0.971020706062307,20.0175940581168,15.6120474078052,15.9685674380663,32.8604364626176,31.8316728315452,14.7189742432096,18.2764105129826,30.6570263359544,56.0635001023389,22.1473039996212,26.8383992544197,42.3478186919505,12.6057123657614,17.4785398362642,12.8918023069361,21.8501777728366,26.4495489636016,22.8179305262225,55.5705032593377,64.9185201161132,18.8978940629094,29.6659908770092,24.8668040231135,36.8508135937638,25.7426264565442,26.4408511386618,27.6762173579966,32.3900440481128,19.7099179238624,18.7738259808871,25.9680494335703,25.7824317039056,45.041720543891,20.9220173898839,8.55505165170758,13.5173749265494,19.5191705840687,19.5783557309157,18.7528813400434,10.6089539620525,12.380777420697,12.2238598221448,28.2843442054721,22.9218406086556,20.5039390407831,24.1566556732857,15.492169821891,10.4351215932604,6.0229671388697,13.599426674155,10.7940638327563,10.3964226791627,4.03224198387602,9.12888730856387,12.6118438707763,10.3914401841148,11.3068663843309,20.4222958676187,14.115912515575,22.9324715735981,42.6640021891999,22.5150682651663,29.8964641260616,24.2651733607096,7.19358442230078,15.5362730188303,16.3286352971307,30.8803881643722,22.5304453950985,16.8349312996923,9.94769427647309,6.93773372100658,9.04799457573663,3.46072954828123,14.6045350489111,28.307537662396,23.7797269422691,15.9005893291483,23.7588874036259,13.0474232852686,13.4679166625312,8.16842156572475,12.2619386500124,24.08284002569,17.3971791988088,20.5853767858365,11.833460512981,7.77751024791665,15.0785222535437,6.60532416730651,4.09144731728529,9.14267396062064,7.78758062725237,16.5998163076016,17.6657898266332,30.0740082536073,9.04899980311838,32.5301107406759,26.6686441142829,27.9096301198291,25.6198190320716,18.0296722751019,22.2917873295639,23.0506242416933,11.6416516832557,50.0117743604194,36.3083673922213,37.4775894469211,30.6874025398605,25.0242524303038,26.8154168222068,24.2822920961373,32.4425854914144,21.066395619397,24.9627469901274,22.1647529528562,30.4474885627188,22.9835538781474,17.8261440846405,30.7768156260773,16.9217239302767,15.7352455145126,9.53389173476672,16.3646774853768,7.00592054203017,13.4939076929054,8.53670813211295,7.05298643048945,11.1111990443253,13.173006917463,5.09984391289413,7.36014819974445,12.4514580978934,5.28670052774077,20.0982430664294,31.5666610792146,29.9585306699966,34.4076121729989,21.781820659321,17.3454874198999,15.4082757151173,12.8122846617018,11.6936257854048,11.5614196048124,8.55512829776949,16.5719474051252,11.6846523125049,10.8069024937347,8.16479220342906,31.6745394591646,33.70331121987,34.9393980586549,26.8819752755815,21.7226785627741,16.9728684134571,13.5958554817153,8.41377843483732,8.16393384775149,4.56569506510662,11.5616524563988,50.5540670319765,57.0021085828289,44.2978361398162,37.123402214096,37.3824597616246,28.0088436959562,25.0295639582205,9.40384315295205,17.8464918572253,14.3768206527355,10.4199465347181,14.6657706363843,11.8712072635143,14.5311904952749,5.30687873499704,12.9327233116623,39.9826878835723,42.5338588513688,27.1592137240301,19.7139808562342,15.410575684647,11.1880511216426,5.85400943573396,15.4482441224067,11.0732344824387,12.437471955284,9.83179888294428,13.4694285855399,5.64131328467895,13.5712155545345,10.8781136763742,15.2446924635901,17.3840150171981,9.47248480927973,9.25972324078405,28.8525503862949,4.03953483526997,29.9732808445444,31.2350995437311,21.3269163755471,34.1725381072149,27.8498342602993,28.8738061404609,28.7415598189175,30.9791209385991,27.6701444562566,10.2822821254978,22.1426532924899,28.4904965867608,17.4289046508326,18.9715641418416,27.8764790513922,37.8737792401771,38.9997388484529,44.3221937426361,52.8590388256583,39.0442637888788,21.7079766261306,37.0804404067056,43.492680162936,36.3442271626188,46.3841877729995,22.6898195146011,19.4050575279659,25.7487364464774,24.5781499187234,22.2910516432856,19.5074257006501,23.0095774706671,19.2522354104482,16.4411072521884,20.4164386015428,13.7690846061483,21.1707262132763,14.6748765117917,12.4327608555847,21.4714012744235,24.8294475526524,23.6362895632888,12.5336759750836,12.9797711407357,34.8576596827619,36.1177018935639,31.1126805981116,30.8924269487693,32.669920425325,30.4274970364675,23.457023339152,20.7128149439014,23.493995546752,1.90934123603023,42.2308551430816,28.8713643320125,21.7090735051821,22.5815359695626,19.2159056096636,17.5323650300267,13.9684340175818,15.9671124610258,6.22151871800606,16.776161453347,12.9649375897364,40.0704343397863,40.0409546906176,32.8622508301441,32.677435339866,26.0192433255798,20.1854450470697,27.0825120475416,35.8618957935931,11.5960377996483,17.8578603879877,20.2247117202034,48.6540516696394,38.0030541509861,46.251812980095,33.2989653941516,28.0140710241584,27.6449533895928,23.3349452935832,17.8710616408221,21.49031947671,19.1569751759997,16.9576712487169,18.0878262283819,8.2982600548914,14.7374749349887,74.3652943803117,87.4710101942388,69.8400004074566,13.9096507703177,18.9559300205694,15.5678880627175,21.2224695288275,19.0597399533438,5.64751842617067,7.36520378411483,5.15605962095457,9.79563139359019,11.6464028361009,9.06472676867641,6.07520250208625,12.158672487054,14.0474146785103,7.7664046762773,31.6551410131739,27.9317411380722,34.8296555738434,30.3883396335368,37.9399824356648,26.8411522337021,22.8914129635664,18.9552252659783,19.5760717851007,24.0062351175608,20.2783439912192,20.5602712110823,16.8554713445788,17.6069169113391,17.230640686684,17.6228665774737,16.2238056322798,17.5547390621972,16.4834360321323,17.3694725758589,14.7433778525729,17.0376773912964,12.3986818772607,18.3136484956734,17.8807822789128,20.6459643255691,17.9269413415317,19.2040889349625,19.5557923938041,18.5176949647054,16.7275375555086,14.677167873959,20.8707832016542,19.9868525129896,21.0268205969444,27.9787847290499,24.7967504952133,15.2558448374292,11.0947232599929,21.838550492832,19.4768981921154
|short_description=p1@Cad
|short_description=p1@Cad
}}
}}

Revision as of 23:17, 18 April 2012

Short description:p1@Cad
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cad_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000013773_5end
EntrezGene:Cad
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cad

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.89
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.25
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E916.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E720.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F220.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E670.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F172.35
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E417.29
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.53
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A148.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A331.79
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A541.27
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A222.40
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A426.46
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A621.22
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H223.73
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I919.85
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.41
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I26.68
Ileum epithelium, pool1.CNhs13199.10252-104B95.70
Ileum epithelium, pool2.CNhs13232.10253-104C18.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3235.60
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6199.28
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9158.48
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F520.22
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F624.10
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F721.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D820.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D915.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.97
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B732.86
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C231.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.72
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C318.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C430.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C456.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A222.15
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I926.84
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A142.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.61
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.48
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.89
Mouse Granule cells, donor1.CNhs12131.11713-123C321.85
Mouse Granule cells, donor2.CNhs12357.11731-123E326.45
Mouse Granule cells, donor3.CNhs12108.11636-122C722.82
Mouse Meningeal cells, donor1.CNhs12132.11716-123C655.57
Mouse Meningeal cells, donor3.CNhs12109.11639-122D164.92
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C718.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E729.67
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D224.87
Mouse Microglia, donor1.CNhs12629.11718-123C836.85
Mouse Microglia, donor2.CNhs12634.11736-123E825.74
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D526.44
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F527.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D932.39
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D225.97
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F225.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D645.04
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D419.52
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.75
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D628.28
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.92
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.50
Mouse Schwann, donor1.CNhs12507.11728-123D924.16
Mouse Schwann, donor2.CNhs12573.11746-123F915.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.44
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C413.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.79
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G122.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G229.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G324.27
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.19
accessory axillary lymph node, adult.CNhs10475.1063-29H915.54
adrenal gland, adult.CNhs10508.49-24D716.33
adrenal gland, embryo E14.CNhs11038.406-44C530.88
adrenal gland, embryo E16.CNhs11004.1254-43D622.53
adrenal gland, embryo E17.CNhs11043.1263-45I116.83
adrenal gland, embryo E18.CNhs11026.1262-18F59.95
adrenal gland, neonate N00.CNhs11191.1311-23C16.94
adrenal gland, neonate N25.CNhs11223.1377-27I39.05
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H114.60
bone (os femoris), adult.CNhs10483.56-12G228.31
bone (os femoris), neonate N02.CNhs11227.1985-43F523.78
bone (os femoris), neonate N16.CNhs11225.1525-43A615.90
bone (os femoris), neonate N20.CNhs11195.1350-25C323.76
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B213.47
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H712.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C724.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D117.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D420.59
corpora quadrigemina, adult.CNhs10501.16-22A411.83
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F115.08
cortex, adult.CNhs10473.12-14D56.61
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F29.14
diencephalon, neonate N30.CNhs11201.1388-42B27.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.60
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A217.67
epididymis, adult.CNhs10490.58-23B230.07
eyeball, adult.CNhs10484.31-12G49.05
eyeball, embryo E12.CNhs11016.345-16C632.53
eyeball, embryo E14.CNhs10521.399-16E226.67
eyeball, embryo E15.CNhs10593.426-16C927.91
eyeball, embryo E17.CNhs11023.1261-18D425.62
eyeball, neonate N00.CNhs11207.633-15C618.03
eyeball, neonate N01.CNhs11140.1532-43E722.29
eyeball, neonate N02.CNhs11205.1551-44G823.05
eyeball, neonate N16.CNhs11188.777-19A211.64
forelimb, embryo E11.CNhs10596.335-25E250.01
forelimb, embryo E12.CNhs10600.359-14H236.31
forelimb, embryo E13.CNhs10589.384-1E237.48
forelimb, embryo E14.CNhs10577.413-26A830.69
forelimb, embryo E15.CNhs11007.437-20E725.02
forelimb, embryo E17.CNhs10598.1517-43C426.82
forelimb, embryo E18.CNhs11008.1520-43B524.28
gonad, embryo E13.CNhs11044.1564-45I632.44
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C821.07
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D224.96
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D522.16
heart, embryo E11.CNhs10586.331-24E930.45
heart, embryo E12.CNhs11015.353-12F522.98
heart, embryo E13.CNhs11013.376-3I917.83
heart, embryo E14.CNhs10597.403-26D430.78
heart, embryo E15.CNhs11017.431-16C816.92
heart, embryo E16.CNhs11021.457-17C615.74
heart, embryo E17.CNhs11025.479-18E59.53
heart, embryo E18.CNhs11030.1283-20G316.36
heart, neonate N00.CNhs11213.639-21E37.01
heart, neonate N03.CNhs11221.1349-25I213.49
heart, neonate N10.CNhs11118.749-24G18.54
heart, neonate N16.CNhs11209.782-15G17.05
heart, neonate N20.CNhs11127.821-26I611.11
heart, neonate N25.CNhs11196.1351-25D313.17
heart, neonate N30.CNhs11202.1390-42D25.10
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G112.45
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A320.10
intestine, embryo E12.CNhs11019.1251-16I531.57
intestine, embryo E13.CNhs11010.381-16D529.96
intestine, embryo E15.CNhs10602.976-16D834.41
intestine, embryo E16.CNhs10585.463-22H421.78
intestine, embryo E17.CNhs10582.482-18D317.35
intestine, embryo E18.CNhs10526.1289-20F715.41
intestine, neonate N00.CNhs11126.644-26D112.81
intestine, neonate N01.CNhs11192.1322-23E911.69
intestine, neonate N06.CNhs11102.688-20B811.56
intestine, neonate N07.CNhs11095.720-20F28.56
intestine, neonate N10.CNhs11098.755-23A516.57
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E310.81
intestine, neonate N30.CNhs11131.1384-42G18.16
kidney, embryo E14.CNhs10606.411-4I931.67
kidney, embryo E15.CNhs10997.434-16F833.70
kidney, embryo E16.CNhs10584.464-22A534.94
kidney, embryo E17.CNhs11028.483-18I226.88
kidney, embryo E18.CNhs11001.1288-20C721.72
kidney, neonate N00.CNhs11214.646-21G716.97
kidney, neonate N10.CNhs11206.758-6D513.60
kidney, neonate N20.CNhs11113.832-19I18.41
kidney, neonate N25.CNhs11122.1353-25F38.16
kidney, neonate N30.CNhs11203.1385-42H14.57
liver, adult pregnant day01.CNhs10466.508-5B211.56
liver, embryo E12.CNhs10601.355-15F850.55
liver, embryo E13.CNhs10524.378-3H657.00
liver, embryo E14.CNhs10594.409-16E144.30
liver, embryo E15.CNhs10520.433-16D737.12
liver, embryo E16.CNhs10523.462-17F537.38
liver, embryo E17.CNhs10510.481-18A328.01
liver, embryo E18.CNhs10579.499-43G425.03
liver, neonate N00.CNhs11117.641-24F49.40
liver, neonate N03.CNhs11123.1345-25G217.85
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H210.42
liver, neonate N10.CNhs11115.751-24B914.67
liver, neonate N20.CNhs11220.823-25A311.87
liver, neonate N25.CNhs11198.1368-26H114.53
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B112.93
lung, embryo E12.CNhs10522.354-16G239.98
lung, embryo E14.CNhs10604.404-26F842.53
lung, embryo E15.CNhs11020.432-17C527.16
lung, embryo E16.CNhs10998.458-17B619.71
lung, embryo E17.CNhs10605.480-44A615.41
lung, embryo E18.CNhs10583.1287-20I611.19
lung, neonate N00.CNhs11224.640-42C65.85
lung, neonate N06.CNhs11212.683-20E515.45
lung, neonate N07.CNhs11111.715-19A311.07
lung, neonate N10.CNhs11219.750-23E612.44
lung, neonate N20.CNhs11109.822-18A49.83
lung, neonate N25.CNhs11119.1359-25C713.47
lung, neonate N30.CNhs11133.1394-42H25.64
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A110.88
mammary gland, adult lactating day02.CNhs10480.595-22B615.24
mammary gland, adult pregnant day19.CNhs10476.588-5H217.38
medulla oblongata, adult.CNhs10477.17-12C29.47
medulla oblongata, neonate N30.CNhs11200.1396-42A39.26
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C728.85
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E129.97
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E231.24
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.33
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D734.17
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D827.85
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D928.87
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D428.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D530.98
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D627.67
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I722.14
ovary, embryo E18.CNhs11040.505-44H728.49
ovary, neonate N00.CNhs11217.1299-22I417.43
oviduct, adult pregnant day01.CNhs10500.988-6G618.97
pancreas, adult.CNhs10486.34-16E427.88
pancreas, embryo E14.CNhs11012.405-44F437.87
pancreas, embryo E15.CNhs11042.1556-45F239.00
pancreas, embryo E16.CNhs11003.460-26E544.32
pancreas, embryo E17.CNhs10599.1558-45G352.86
pancreas, embryo E18.CNhs10580.1535-43I739.04
pancreas, neonate N00.CNhs11105.645-26G921.71
pancreas, neonate N01.CNhs11138.1531-43D737.08
pancreas, neonate N02.CNhs11139.1539-43D843.49
pancreas, neonate N16.CNhs11136.787-43B636.34
pancreas, neonate N25.CNhs11094.1555-45E246.38
pancreas, neonate N30.CNhs11182.1548-44H522.69
pituitary gland, adult.CNhs10493.21-1G819.41
pituitary gland, embryo E12.CNhs11018.346-16E625.75
pituitary gland, embryo E13.CNhs11009.370-44C724.58
pituitary gland, embryo E14.CNhs11037.398-44A522.29
pituitary gland, embryo E15.CNhs10592.427-16B919.51
pituitary gland, embryo E16.CNhs11036.449-43F623.01
pituitary gland, embryo E17.CNhs11039.1265-44F519.25
pituitary gland, neonate N00.CNhs11190.1308-22E916.44
placenta, adult pregnant day10.CNhs10472.539-13I720.42
placenta, adult pregnant day17.CNhs10464.577-18G313.77
prostate, adult.CNhs10470.859-1F821.17
skin, adult.CNhs10492.30-1C314.67
skin, neonate N00.CNhs11124.650-25G412.43
skin, neonate N03.CNhs11215.662-22H321.47
skin, neonate N06.CNhs11097.693-20I524.83
skin, neonate N10.CNhs11108.762-6C423.64
small intestine, neonate N16.CNhs11114.790-21I112.53
spinal cord, adult.CNhs10505.24-13C912.98
spleen, adult.CNhs10465.25-2G234.86
spleen, embryo E16.CNhs11035.461-43C136.12
spleen, embryo E18.CNhs11011.1271-21F231.11
spleen, neonate N10.CNhs11116.752-24D130.89
spleen, neonate N20.CNhs11112.824-19H132.67
spleen, neonate N25.CNhs11099.1354-25G330.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C623.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C920.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.49
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E342.23
stomach, embryo E15.CNhs10603.1252-16G828.87
stomach, embryo E16.CNhs11022.459-17D421.71
stomach, embryo E17.CNhs11006.1035-18D522.58
stomach, embryo E18.CNhs10999.1286-20C619.22
stomach, neonate N03.CNhs11193.1340-24B817.53
stomach, neonate N07.CNhs11210.718-18A913.97
stomach, neonate N25.CNhs11104.1355-25E415.97
stomach, neonate N30.CNhs11134.1386-42I16.22
submandibular gland, adult.CNhs10469.59-29C116.78
testis, adult.CNhs10504.57-7G512.96
testis, embryo E13.CNhs11031.389-23F540.07
testis, embryo E15.CNhs11034.443-27C540.04
testis, embryo E16.CNhs11033.470-26G532.86
testis, embryo E17.CNhs11029.486-18I532.68
testis, embryo E18.CNhs11027.503-18G526.02
testis, neonate N00.CNhs11189.1300-22B720.19
testis, neonate N07.CNhs11222.726-26I427.08
testis, neonate N10.CNhs11204.763-44D935.86
testis, neonate N20.CNhs11110.839-18H311.60
testis, neonate N30.CNhs11130.1391-42E217.86
thymus, adult.CNhs10471.38-12B520.22
thymus, embryo E14.CNhs11041.402-44I448.65
thymus, embryo E15.CNhs11005.430-45I238.00
thymus, embryo E16.CNhs11002.456-26C546.25
thymus, embryo E17.CNhs10581.478-18C133.30
thymus, embryo E18.CNhs10595.1273-19G428.01
thymus, neonate N02.CNhs11181.1541-43F827.64
thymus, neonate N03.CNhs11137.2104-43C723.33
thymus, neonate N06.CNhs11197.681-26C417.87
thymus, neonate N07.CNhs11211.713-19D321.49
thymus, neonate N10.CNhs11194.748-24E419.16
thymus, neonate N20.CNhs11186.820-7A216.96
thymus, neonate N25.CNhs11125.1362-25G718.09
thymus, neonate N30.CNhs11132.1393-42G28.30
tongue, adult.CNhs10499.32-1B414.74
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H374.37
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F787.47
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G569.84
urinary bladder, adult.CNhs10481.879-12E413.91
uterus, adult pregnant day19.CNhs10497.590-15F518.96
uterus, adult.CNhs10509.92-27E515.57
vagina, adult.CNhs10502.89-27D521.22
vesicular gland, adult.CNhs10491.51-27F819.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.80
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I831.66
whole body, embryo E12.CNhs10587.857-27C927.93
whole body, embryo E13.CNhs10512.372-23H234.83
whole body, embryo E14.5.CNhs10578.420-27D230.39
whole body, embryo E14.CNhs10519.395-14B137.94
whole body, embryo E16.CNhs10514.453-14F226.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G522.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.96
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G524.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G520.56
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.86
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.61
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G517.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.55
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.37
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.04
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G519.56
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.68
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.99
whole body, embryo E17.5.CNhs10513.490-9F921.03
whole body, embryo E17.CNhs10517.475-3I527.98
whole body, embryo E18.CNhs10516.493-3B324.80
whole body, neonate N00.CNhs10525.657-19C215.26
whole body, neonate N01.CNhs10576.659-23C611.09
whole body, neonate N06.CNhs10515.692-21D121.84
whole body, neonate N10.CNhs10518.761-6B419.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:31357139..31357182,%2B&oldid=974626"