Personal tools

UBERON:0004782

From FANTOM5_SSTAR

Revision as of 11:31, 12 September 2014 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:gastrointestinal system serosa
Definition:"A serous membrane that is part of a digestive system [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0001522
Synonyms: "digestive system serosa" EXACT [OBOL:automatic]
"digestive system serous membrane" EXACT [OBOL:automatic]
"gastrointestinal system serous membrane" EXACT [OBOL:automatic]
"serosa of digestive system" EXACT [OBOL:automatic]
"serosa of gastrointestinal system" EXACT [OBOL:automatic]
"serous membrane of digestive system" EXACT [OBOL:automatic]
"serous membrane of gastrointestinal system" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000042(serous membrane)
part_of:UBERON:0005409(gastrointestinal system)



Children

is a:UBERON:0004854 (gastrointestinal system mesentery)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004782 (gastrointestinal system serosa), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.98e-131FFCP PHASE2:Hg19::chr11:1891326..1891337,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:1891326..1891337, -
8.98e-131FFCP PHASE2:Hg19::chr21:28820911..28820933,-#_aaac781f7b01d6b625e6e0ffcc061e2dp1@ENST00000420186, p1@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr11:925449..925458,+#_aaac781f7b01d6b625e6e0ffcc061e2dp17@AP2A2
8.98e-131FFCP PHASE2:Hg19::chr9:127269434..127269438,-#_aaac781f7b01d6b625e6e0ffcc061e2dp8@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr6:119812455..119812476,-#_aaac781f7b01d6b625e6e0ffcc061e2dp1@uc003pyn.1
8.98e-131FFCP PHASE2:Hg19::chr14:75904485..75904519,+#_aaac781f7b01d6b625e6e0ffcc061e2dp12@JDP2
8.98e-131FFCP PHASE1:Hg19::chr11:56859693..56859701,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859693..56859701, -
8.98e-131FFCP PHASE1:Hg19::chr7:22259740..22259751,-#_aaac781f7b01d6b625e6e0ffcc061e2dp19@RAPGEF5
8.98e-131FFCP PHASE2:Hg19::chr9:79894790..79894797,+#_aaac781f7b01d6b625e6e0ffcc061e2dp10@VPS13A
8.98e-131FFCP PHASE2:Hg19::chr11:56859693..56859701,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859693..56859701, -
8.98e-131FFCP PHASE1:Hg19::chr9:127269488..127269495,-#_aaac781f7b01d6b625e6e0ffcc061e2dp5@NR5A1
8.98e-131FFCP PHASE2:Hg19::chr4:76901930..76901942,+#_aaac781f7b01d6b625e6e0ffcc061e2dp1@ENST00000501239
8.98e-131FFCP PHASE2:Hg19::chr9:127260615..127260651,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr9:127260615..127260651, -
8.98e-131FFCP PHASE2:Hg19::chr8:22436248..22436259,+#_aaac781f7b01d6b625e6e0ffcc061e2dp11@PDLIM2
8.98e-131FFCP PHASE1:Hg19::chr9:124516729..124516752,+#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr9:124516729..124516752, +
8.98e-131FFCP PHASE2:Hg19::chr1:159172187..159172197,-#_aaac781f7b01d6b625e6e0ffcc061e2dp1@uc001ftm.1
8.98e-131FFCP PHASE1:Hg19::chr1:28520450..28520453,-#_aaac781f7b01d6b625e6e0ffcc061e2dp21@PTAFR
8.98e-131FFCP PHASE1:Hg19::chr11:56859584..56859589,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859584..56859589, -
8.98e-131FFCP PHASE2:Hg19::chr9:133973310..133973321,+#_aaac781f7b01d6b625e6e0ffcc061e2dp18@AIF1L
8.98e-131FFCP PHASE2:Hg19::chr21:28820941..28820952,-#_aaac781f7b01d6b625e6e0ffcc061e2dp2@ENST00000420186, p2@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr8:22424709..22424716,-#_aaac781f7b01d6b625e6e0ffcc061e2dp2@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr17:78171885..78171900,+#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr17:78171885..78171900, +
8.98e-131FFCP PHASE1:Hg19::chr1:157811772..157811796,-#_aaac781f7b01d6b625e6e0ffcc061e2dp7@CD5L
8.98e-131FFCP PHASE2:Hg19::chr11:56859584..56859589,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859584..56859589, -
8.98e-131FFCP PHASE2:Hg19::chr9:127269462..127269484,-#_aaac781f7b01d6b625e6e0ffcc061e2dp2@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr16:84218794..84218800,+#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr16:84218794..84218800, +
8.98e-131FFCP PHASE1:Hg19::chr21:28820892..28820899,-#_aaac781f7b01d6b625e6e0ffcc061e2dp4@ENST00000420186, p4@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr6:152639579..152639586,-#_aaac781f7b01d6b625e6e0ffcc061e2dp60@SYNE1
8.98e-131FFCP PHASE1:Hg19::chr11:925449..925458,+#_aaac781f7b01d6b625e6e0ffcc061e2dp17@AP2A2
8.98e-131FFCP PHASE1:Hg19::chr19:32401253..32401271,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr19:32401253..32401271, -
8.98e-131FFCP PHASE2:Hg19::chr8:47834174..47834213,+#_aaac781f7b01d6b625e6e0ffcc061e2dp1@ENST00000524012
8.98e-131FFCP PHASE2:Hg19::chr7:22259740..22259751,-#_aaac781f7b01d6b625e6e0ffcc061e2dp19@RAPGEF5
8.98e-131FFCP PHASE1:Hg19::chr11:56859603..56859606,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859603..56859606, -
8.98e-131FFCP PHASE2:Hg19::chr21:28820954..28820963,-#_aaac781f7b01d6b625e6e0ffcc061e2dp3@ENST00000420186, p3@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr8:22424743..22424759,-#_aaac781f7b01d6b625e6e0ffcc061e2dp1@ENST00000517384
8.98e-131FFCP PHASE1:Hg19::chrX:69645652..69645664,+#_aaac781f7b01d6b625e6e0ffcc061e2dp7@GDPD2
8.98e-131FFCP PHASE2:Hg19::chr11:56859603..56859606,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859603..56859606, -
8.98e-131FFCP PHASE2:Hg19::chr9:127269488..127269495,-#_aaac781f7b01d6b625e6e0ffcc061e2dp5@NR5A1
8.98e-131FFCP PHASE2:Hg19::chr9:124516729..124516752,+#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr9:124516729..124516752, +
8.98e-131FFCP PHASE1:Hg19::chr21:28820911..28820933,-#_aaac781f7b01d6b625e6e0ffcc061e2dp1@ENST00000420186, p1@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr17:78171885..78171900,+#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr17:78171885..78171900, +
8.98e-131FFCP PHASE2:Hg19::chr6:119812455..119812476,-#_aaac781f7b01d6b625e6e0ffcc061e2dp1@uc003pyn.1
8.98e-131FFCP PHASE1:Hg19::chr9:79894790..79894797,+#_aaac781f7b01d6b625e6e0ffcc061e2dp10@VPS13A
8.98e-131FFCP PHASE1:Hg19::chr4:76901930..76901942,+#_aaac781f7b01d6b625e6e0ffcc061e2dp1@ENST00000501239
8.98e-131FFCP PHASE1:Hg19::chr10:98014908..98014919,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr10:98014908..98014919, -
8.98e-131FFCP PHASE1:Hg19::chr11:56859608..56859619,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859608..56859619, -
8.98e-131FFCP PHASE2:Hg19::chr10:98014908..98014919,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr10:98014908..98014919, -
8.98e-131FFCP PHASE1:Hg19::chr8:22436248..22436259,+#_aaac781f7b01d6b625e6e0ffcc061e2dp11@PDLIM2
8.98e-131FFCP PHASE1:Hg19::chr1:159172187..159172197,-#_aaac781f7b01d6b625e6e0ffcc061e2dp1@uc001ftm.1
8.98e-131FFCP PHASE2:Hg19::chr11:56859608..56859619,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859608..56859619, -
8.98e-131FFCP PHASE1:Hg19::chr9:127269434..127269438,-#_aaac781f7b01d6b625e6e0ffcc061e2dp8@NR5A1
8.98e-131FFCP PHASE2:Hg19::chr1:28520450..28520453,-#_aaac781f7b01d6b625e6e0ffcc061e2dp21@PTAFR
8.98e-131FFCP PHASE2:Hg19::chr8:22424709..22424716,-#_aaac781f7b01d6b625e6e0ffcc061e2dp2@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr1:157811772..157811796,-#_aaac781f7b01d6b625e6e0ffcc061e2dp7@CD5L
8.98e-131FFCP PHASE1:Hg19::chr21:28820941..28820952,-#_aaac781f7b01d6b625e6e0ffcc061e2dp2@ENST00000420186, p2@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr15:95561320..95561328,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr15:95561320..95561328, -
8.98e-131FFCP PHASE2:Hg19::chr21:28820892..28820899,-#_aaac781f7b01d6b625e6e0ffcc061e2dp4@ENST00000420186, p4@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr9:127260615..127260651,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr9:127260615..127260651, -
8.98e-131FFCP PHASE2:Hg19::chr16:84218794..84218800,+#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr16:84218794..84218800, +
8.98e-131FFCP PHASE1:Hg19::chr6:152639579..152639586,-#_aaac781f7b01d6b625e6e0ffcc061e2dp60@SYNE1
8.98e-131FFCP PHASE1:Hg19::chr10:98014943..98014960,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr10:98014943..98014960, -
8.98e-131FFCP PHASE1:Hg19::chr11:56859638..56859643,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859638..56859643, -
8.98e-131FFCP PHASE2:Hg19::chr10:98014943..98014960,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr10:98014943..98014960, -
8.98e-131FFCP PHASE1:Hg19::chr14:75904485..75904519,+#_aaac781f7b01d6b625e6e0ffcc061e2dp12@JDP2
8.98e-131FFCP PHASE1:Hg19::chr9:133973310..133973321,+#_aaac781f7b01d6b625e6e0ffcc061e2dp18@AIF1L
8.98e-131FFCP PHASE2:Hg19::chr15:95561320..95561328,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr15:95561320..95561328, -
8.98e-131FFCP PHASE2:Hg19::chr11:56859638..56859643,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859638..56859643, -
8.98e-131FFCP PHASE2:Hg19::chr19:32401253..32401271,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr19:32401253..32401271, -
8.98e-131FFCP PHASE1:Hg19::chr9:127269462..127269484,-#_aaac781f7b01d6b625e6e0ffcc061e2dp2@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr8:47834174..47834213,+#_aaac781f7b01d6b625e6e0ffcc061e2dp1@ENST00000524012
8.98e-131FFCP PHASE1:Hg19::chr11:1891326..1891337,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:1891326..1891337, -
8.98e-131FFCP PHASE2:Hg19::chr8:22424743..22424759,-#_aaac781f7b01d6b625e6e0ffcc061e2dp1@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chrX:69645652..69645664,+#_aaac781f7b01d6b625e6e0ffcc061e2dp7@GDPD2
8.98e-131FFCP PHASE1:Hg19::chr21:28820954..28820963,-#_aaac781f7b01d6b625e6e0ffcc061e2dp3@ENST00000420186, p3@uc002ymh.2
6.24e-88FFCP PHASE2:Hg19::chr1:21011608..21011618,-#_2cf9b620a0e055ba61d1c41a492d0b05p15@KIF17
6.24e-88FFCP PHASE2:Hg19::chr19:32401274..32401289,-#_2cf9b620a0e055ba61d1c41a492d0b05p@chr19:32401274..32401289, -
6.24e-88FFCP PHASE1:Hg19::chr22:36718586..36718593,-#_2cf9b620a0e055ba61d1c41a492d0b05p@chr22:36718586..36718593, -
6.24e-88FFCP PHASE1:Hg19::chr11:56859722..56859732,-#_2cf9b620a0e055ba61d1c41a492d0b05p@chr11:56859722..56859732, -
6.24e-88FFCP PHASE2:Hg19::chr21:40459334..40459341,+#_2cf9b620a0e055ba61d1c41a492d0b05p@chr21:40459334..40459341, +
6.24e-88FFCP PHASE2:Hg19::chr11:56859722..56859732,-#_2cf9b620a0e055ba61d1c41a492d0b05p@chr11:56859722..56859732, -
6.24e-88FFCP PHASE1:Hg19::chr4:146461014..146461025,+#_2cf9b620a0e055ba61d1c41a492d0b05p@chr4:146461014..146461025, +
6.24e-88FFCP PHASE1:Hg19::chr3:130267501..130267516,+#_2cf9b620a0e055ba61d1c41a492d0b05p@chr3:130267501..130267516, +
6.24e-88FFCP PHASE1:Hg19::chr9:127267367..127267383,+#_2cf9b620a0e055ba61d1c41a492d0b05p@chr9:127267367..127267383, +
6.24e-88FFCP PHASE1:Hg19::chr1:21011608..21011618,-#_2cf9b620a0e055ba61d1c41a492d0b05p15@KIF17
6.24e-88FFCP PHASE2:Hg19::chr22:36718586..36718593,-#_2cf9b620a0e055ba61d1c41a492d0b05p@chr22:36718586..36718593, -
6.24e-88FFCP PHASE1:Hg19::chr19:32401274..32401289,-#_2cf9b620a0e055ba61d1c41a492d0b05p@chr19:32401274..32401289, -
6.24e-88FFCP PHASE2:Hg19::chr9:127267367..127267383,+#_2cf9b620a0e055ba61d1c41a492d0b05p@chr9:127267367..127267383, +
6.24e-88FFCP PHASE1:Hg19::chr21:40459334..40459341,+#_2cf9b620a0e055ba61d1c41a492d0b05p@chr21:40459334..40459341, +
6.24e-88FFCP PHASE2:Hg19::chr4:146461014..146461025,+#_2cf9b620a0e055ba61d1c41a492d0b05p@chr4:146461014..146461025, +
6.24e-88FFCP PHASE2:Hg19::chr3:130267501..130267516,+#_2cf9b620a0e055ba61d1c41a492d0b05p@chr3:130267501..130267516, +
9.74e-88FFCP PHASE1:Hg19::chr7:151070957..151070988,+#_b0ac802ac1cf459edb396b2023932bd9p@chr7:151070957..151070988, +
9.74e-88FFCP PHASE1:Hg19::chr2:128321491..128321509,+#_b0ac802ac1cf459edb396b2023932bd9p@chr2:128321491..128321509, +
9.74e-88FFCP PHASE2:Hg19::chr16:70680361..70680370,+#_b0ac802ac1cf459edb396b2023932bd9p6@IL34
9.74e-88FFCP PHASE1:Hg19::chr12:72481040..72481051,+#_b0ac802ac1cf459edb396b2023932bd9p19@TRHDE
9.74e-88FFCP PHASE1:Hg19::chr14:24168655..24168686,+#_b0ac802ac1cf459edb396b2023932bd9p@chr14:24168655..24168686, +
9.74e-88FFCP PHASE1:Hg19::chr2:1508349..1508357,+#_b0ac802ac1cf459edb396b2023932bd9p@chr2:1508349..1508357, +
9.74e-88FFCP PHASE2:Hg19::chr12:72481040..72481051,+#_b0ac802ac1cf459edb396b2023932bd9p19@TRHDE
9.74e-88FFCP PHASE2:Hg19::chr2:128321491..128321509,+#_b0ac802ac1cf459edb396b2023932bd9p@chr2:128321491..128321509, +
9.74e-88FFCP PHASE1:Hg19::chr16:70680361..70680370,+#_b0ac802ac1cf459edb396b2023932bd9p6@IL34
9.74e-88FFCP PHASE2:Hg19::chr14:24168655..24168686,+#_b0ac802ac1cf459edb396b2023932bd9p@chr14:24168655..24168686, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0004782&oldid=3274367"