FFCP PHASE1:Hg19::chr8:25281776..25281779,-
From FANTOM5_SSTAR
| Short description: | p1@GNRH1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_GNRH1_5end |
| Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
| Association with transcript: | -29bp_to_ENST00000421054_5end |
| EntrezGene: | GNRH1 |
| HGNC: | 4419 |
| UniProt: | P01148 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@GNRH1 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| telencephalic nucleus | 3.15e-112 | 7 |
| globus pallidus | 1.55e-98 | 2 |
| pallidum | 1.55e-98 | 2 |
| basal ganglion | 1.37e-87 | 9 |
| neural nucleus | 1.37e-87 | 9 |
| nuclear complex of neuraxis | 1.37e-87 | 9 |
| nucleus of brain | 1.37e-87 | 9 |
| aggregate regional part of brain | 1.37e-87 | 9 |
| collection of basal ganglia | 1.37e-87 | 9 |
| cerebral subcortex | 1.37e-87 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
