NonredundantMotifs:66

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known66
• db :UNIPROBE
• Id :Hmbox1_2674.1
• name :CELL08
• score :0.04528859214187489
  
• External refs:

EntrezGene:79618
UniProt:79618

• Internal refs:

EntrezGene:79618

Motif matrix

P0 A C G T 1 0.254479668696389 0.227469316696944 0.304515974410131 0.213535040196537 2 0.36645859001693 0.201140067016195 0.0957481010444648 0.33665324192241 3 0.440373158710397 0.0969468456466158 0.33514831723714 0.127531678405846 4 0.455634243977185 0.146688688883105 0.218234847450852 0.179442219688858 5 0.467078282347626 0.0884142789645963 0.140072329526068 0.30443510916171 6 0.010084322456452 0.851943241529712 0.0169294187349031 0.121043017278933 7 0.00602137704064227 0.00541222736872744 0.0329634494747109 0.955602946115919 8 0.701470573673509 0.00404744817933642 0.292080276087546 0.00240170205960837 9 0.0104487957312772 0.0015213311494839 0.985769101427864 0.00226077169137474 10 0.00361255716771864 0.00286509971524169 0.0123735203480181 0.981148822769022 11 0.110752756041425 0.00958413697711005 0.00277743593674692 0.876885671044718 12 0.937476564187191 0.0103710715438958 0.0214277758778942 0.0307245883910191 13 0.637452920785008 0.0580147587497441 0.103108228241329 0.201424092223919 14 0.130059650041209 0.441130471971358 0.135433155914032 0.2933767220734 15 0.333023547883078 0.128060518381811 0.26165337468331 0.277262559051802 16 0.253475830777991 0.111553947296041 0.200185358746814 0.434784863179154 17 0.0737246854371527 0.426972677778951 0.305816396751326 0.19348624003257