NonredundantMotifs:88

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant88
• db :HOCOMOCO
• Id :BRCA1_f1
• name  :
• score :0.06605555365236132
  
• External refs:

EntrezGene:672
UniProt:672

• Internal refs:

EntrezGene:672

Motif matrix

P0 A C G T 1 10.452921651409689 14.310920735735058 21.0795223142001 26.727048291098647 2 13.750382934951881 0.0 19.992653074424748 38.827376983066934 3 2.0342658299611203 9.08445991003025 11.11872573999137 50.33296151246075 4 4.0685316599222325 25.008581324532763 34.96937789874156 8.523922109247003 5 2.0342658299611203 10.873986802603355 32.724579493183576 26.937580866695445 6 0.0 0.0 63.17015421901801 9.400258773425483 7 0.0 2.0342658299611203 0.0 70.53614716248237 8 0.0 0.0 0.0 72.5704129924435 9 4.577098117412513 5.31396213200145 60.13652045557815 2.5428322874513927