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UBERON:0000305

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Name:amnion
Definition:"A membrane building the amniotic sac that surrounds and protects an embryo. It is developed in reptiles, birds, and mammals, which are hence called 窶廣mniota窶� but not in amphibians and fish (Ichthyopsida), which are consequently termed 窶廣namniota窶� The primary function of this is the protection of the embryo for its development. It stems from parts of the mesoderm on the outer side and the ectoderm on the inner side[WP]." [Wikipedia:Amnion]
Xrefs:
links:

BTO:0000065
EHDAA:136
EHDAA2:0000116
EMAPA:16109
EV:0100122
FMA:80223
GAID:1298
MESH:A.16.254.403.277
ncithesaurus:Amnion
SCTID:181457005

VHOG:0000721
Alt_id: UBERON:BTO_0000065-FMA_80223

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0004120(mesoderm-derived structure),UBERON:0004121(ectoderm-derived structure),UBERON:0005631(extraembryonic membrane)
develops_from:UBERON:0000924(ectoderm),UBERON:0004871(somatic layer of lateral plate mesoderm)



Children

derives from:FF:0000010 (human amniotic membrane cell- Amnion sample),FF:0011386 (mouse amnion - adult pregnant day17.5 sample)
part of:FF:0000010 (human amniotic membrane cell- Amnion sample),CL:0002536 (amniotic epithelial cell),CL:0002537 (amnion mesenchymal stem cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000305 (amnion), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE2:Mm9::chr1:172988209..172988210,-#_ea24fa935f6b043451af56f5445061bap7@Fcgr3
3.07e-86FFCP PHASE2:Mm9::chr11:7060053..7060066,+#_ea24fa935f6b043451af56f5445061bap@chr11:7060053..7060066, +
3.07e-86FFCP PHASE2:Mm9::chr12:100615157..100615164,-#_ea24fa935f6b043451af56f5445061bap@chr12:100615157..100615164, -
3.07e-86FFCP PHASE1:Mm9::chr7:53922673..53922686,-#_ea24fa935f6b043451af56f5445061bap6@Tph1
3.07e-86FFCP PHASE2:Mm9::chr2:145704563..145704575,+#_ea24fa935f6b043451af56f5445061bap@chr2:145704563..145704575, +
3.07e-86FFCP PHASE1:Mm9::chr13:41014050..41014058,+#_ea24fa935f6b043451af56f5445061bap@chr13:41014050..41014058, +
3.07e-86FFCP PHASE2:Mm9::chr14:121638899..121638906,+#_ea24fa935f6b043451af56f5445061bap@chr14:121638899..121638906, +
3.07e-86FFCP PHASE2:Mm9::chr3:94484780..94484795,-#_ea24fa935f6b043451af56f5445061bap@chr3:94484780..94484795, -
3.07e-86FFCP PHASE2:Mm9::chr13:41014050..41014058,+#_ea24fa935f6b043451af56f5445061bap@chr13:41014050..41014058, +
3.07e-86FFCP PHASE2:Mm9::chr4:43043312..43043317,-#_ea24fa935f6b043451af56f5445061bap4@Stoml2
3.07e-86FFCP PHASE2:Mm9::chr7:151937929..151937932,-#_ea24fa935f6b043451af56f5445061bap8@Ano1
3.07e-86FFCP PHASE2:Mm9::chr3:6785485..6785487,-#_ea24fa935f6b043451af56f5445061bap@chr3:6785485..6785487, -
3.07e-86FFCP PHASE2:Mm9::chr1:140503157..140503186,-#_ea24fa935f6b043451af56f5445061bap@chr1:140503157..140503186, -
3.07e-86FFCP PHASE2:Mm9::chr2:151366511..151366518,+#_ea24fa935f6b043451af56f5445061bap@chr2:151366511..151366518, +
3.07e-86FFCP PHASE2:Mm9::chr11:11953937..11953941,+#_ea24fa935f6b043451af56f5445061bap@chr11:11953937..11953941, +
3.07e-86FFCP PHASE1:Mm9::chr15:3587448..3587458,+#_ea24fa935f6b043451af56f5445061bap@chr15:3587448..3587458, +
3.07e-86FFCP PHASE2:Mm9::chr6:116597883..116597886,-#_ea24fa935f6b043451af56f5445061bap@chr6:116597883..116597886, -
3.07e-86FFCP PHASE2:Mm9::chrX:136335269..136335280,+#_ea24fa935f6b043451af56f5445061bap6@Cldn2
3.07e-86FFCP PHASE1:Mm9::chr1:155253650..155253673,-#_ea24fa935f6b043451af56f5445061bap@chr1:155253650..155253673, -
3.07e-86FFCP PHASE1:Mm9::chr7:151937929..151937932,-#_ea24fa935f6b043451af56f5445061bap8@Ano1
3.07e-86FFCP PHASE1:Mm9::chr16:23320910..23320916,+#_ea24fa935f6b043451af56f5445061bap@chr16:23320910..23320916, +
3.07e-86FFCP PHASE1:Mm9::chr6:128229148..128229155,-#_ea24fa935f6b043451af56f5445061bap@chr6:128229148..128229155, -
3.07e-86FFCP PHASE2:Mm9::chr15:3587448..3587458,+#_ea24fa935f6b043451af56f5445061bap@chr15:3587448..3587458, +
3.07e-86FFCP PHASE1:Mm9::chr13:13955172..13955179,-#_ea24fa935f6b043451af56f5445061bap@chr13:13955172..13955179, -
3.07e-86FFCP PHASE1:Mm9::chr2:145704563..145704575,+#_ea24fa935f6b043451af56f5445061bap@chr2:145704563..145704575, +
3.07e-86FFCP PHASE2:Mm9::chr11:94369661..94369663,-#_ea24fa935f6b043451af56f5445061bap@chr11:94369661..94369663, -
3.07e-86FFCP PHASE1:Mm9::chr9:46018679..46018690,+#_ea24fa935f6b043451af56f5445061bap@chr9:46018679..46018690, +
3.07e-86FFCP PHASE2:Mm9::chr2:32785262..32785287,-#_ea24fa935f6b043451af56f5445061bap@chr2:32785262..32785287, -
3.07e-86FFCP PHASE2:Mm9::chr15:33003311..33003317,-#_ea24fa935f6b043451af56f5445061bap@chr15:33003311..33003317, -
3.07e-86FFCP PHASE1:Mm9::chr3:6785485..6785487,-#_ea24fa935f6b043451af56f5445061bap@chr3:6785485..6785487, -
3.07e-86FFCP PHASE1:Mm9::chr14:117347211..117347216,-#_ea24fa935f6b043451af56f5445061bap@chr14:117347211..117347216, -
3.07e-86FFCP PHASE2:Mm9::chr17:35161052..35161058,+#_ea24fa935f6b043451af56f5445061bap@chr17:35161052..35161058, +
3.07e-86FFCP PHASE1:Mm9::chr9:14480461..14480472,-#_ea24fa935f6b043451af56f5445061bap@chr9:14480461..14480472, -
3.07e-86FFCP PHASE2:Mm9::chr1:71760739..71760747,+#_ea24fa935f6b043451af56f5445061bap@chr1:71760739..71760747, +
3.07e-86FFCP PHASE2:Mm9::chr3:31973017..31973023,+#_ea24fa935f6b043451af56f5445061bap@chr3:31973017..31973023, +
3.07e-86FFCP PHASE2:Mm9::chr9:14480480..14480485,-#_ea24fa935f6b043451af56f5445061bap@chr9:14480480..14480485, -
3.07e-86FFCP PHASE2:Mm9::chrX:12833809..12833838,+#_ea24fa935f6b043451af56f5445061bap@chrX:12833809..12833838, +
3.07e-86FFCP PHASE1:Mm9::chr13:34338500..34338511,-#_ea24fa935f6b043451af56f5445061bap@chr13:34338500..34338511, -
3.07e-86FFCP PHASE1:Mm9::chr4:154591314..154591321,-#_ea24fa935f6b043451af56f5445061bap@chr4:154591314..154591321, -
3.07e-86FFCP PHASE2:Mm9::chr4:134096797..134096803,-#_ea24fa935f6b043451af56f5445061bap1@ENSMUST00000127585
3.07e-86FFCP PHASE1:Mm9::chr6:31569960..31569984,+#_ea24fa935f6b043451af56f5445061bap@chr6:31569960..31569984, +
3.07e-86FFCP PHASE2:Mm9::chr9:46018791..46018808,+#_ea24fa935f6b043451af56f5445061bap@chr9:46018791..46018808, +
3.07e-86FFCP PHASE1:Mm9::chr9:57862279..57862314,+#_ea24fa935f6b043451af56f5445061bap@chr9:57862279..57862314, +
3.07e-86FFCP PHASE2:Mm9::chr8:109945451..109945458,-#_ea24fa935f6b043451af56f5445061bap2@Nob1
3.07e-86FFCP PHASE2:Mm9::chr10:83099058..83099067,-#_ea24fa935f6b043451af56f5445061bap@chr10:83099058..83099067, -
3.07e-86FFCP PHASE2:Mm9::chr11:78250793..78250794,-#_ea24fa935f6b043451af56f5445061bap@chr11:78250793..78250794, -
3.07e-86FFCP PHASE2:Mm9::chr1:172989720..172989726,-#_ea24fa935f6b043451af56f5445061bap5@Fcgr3
3.07e-86FFCP PHASE1:Mm9::chr15:75882346..75882372,-#_ea24fa935f6b043451af56f5445061bap@chr15:75882346..75882372, -
3.07e-86FFCP PHASE1:Mm9::chr4:12074919..12074933,-#_ea24fa935f6b043451af56f5445061bap@chr4:12074919..12074933, -
3.07e-86FFCP PHASE1:Mm9::chr10:83099058..83099067,-#_ea24fa935f6b043451af56f5445061bap@chr10:83099058..83099067, -
3.07e-86FFCP PHASE1:Mm9::chr6:49322345..49322382,+#_ea24fa935f6b043451af56f5445061bap@chr6:49322345..49322382, +
3.07e-86FFCP PHASE1:Mm9::chr6:116597883..116597886,-#_ea24fa935f6b043451af56f5445061bap@chr6:116597883..116597886, -
3.07e-86FFCP PHASE1:Mm9::chr3:52540380..52540384,+#_ea24fa935f6b043451af56f5445061bap@chr3:52540380..52540384, +
3.07e-86FFCP PHASE1:Mm9::chr11:94369661..94369663,-#_ea24fa935f6b043451af56f5445061bap@chr11:94369661..94369663, -
3.07e-86FFCP PHASE1:Mm9::chr1:71760726..71760736,+#_ea24fa935f6b043451af56f5445061bap@chr1:71760726..71760736, +
3.07e-86FFCP PHASE2:Mm9::chr4:118547872..118547876,+#_ea24fa935f6b043451af56f5445061bap@chr4:118547872..118547876, +
3.07e-86FFCP PHASE2:Mm9::chr6:49322345..49322382,+#_ea24fa935f6b043451af56f5445061bap@chr6:49322345..49322382, +
3.07e-86FFCP PHASE2:Mm9::chr14:55990290..55990292,+#_ea24fa935f6b043451af56f5445061bap@chr14:55990290..55990292, +
3.07e-86FFCP PHASE2:Mm9::chr2:151366529..151366534,+#_ea24fa935f6b043451af56f5445061bap@chr2:151366529..151366534, +
3.07e-86FFCP PHASE1:Mm9::chr7:106840133..106840144,-#_ea24fa935f6b043451af56f5445061bap@chr7:106840133..106840144, -
3.07e-86FFCP PHASE1:Mm9::chr15:4592969..4592972,-#_ea24fa935f6b043451af56f5445061bap@chr15:4592969..4592972, -
3.07e-86FFCP PHASE2:Mm9::chr2:119773835..119773842,+#_ea24fa935f6b043451af56f5445061bap@chr2:119773835..119773842, +
3.07e-86FFCP PHASE2:Mm9::chr11:54720278..54720283,+#_ea24fa935f6b043451af56f5445061bap@chr11:54720278..54720283, +
3.07e-86FFCP PHASE2:Mm9::chr13:34338500..34338511,-#_ea24fa935f6b043451af56f5445061bap@chr13:34338500..34338511, -
3.07e-86FFCP PHASE1:Mm9::chr2:145704607..145704614,+#_ea24fa935f6b043451af56f5445061bap@chr2:145704607..145704614, +
3.07e-86FFCP PHASE1:Mm9::chr9:46018791..46018808,+#_ea24fa935f6b043451af56f5445061bap@chr9:46018791..46018808, +
3.07e-86FFCP PHASE2:Mm9::chr2:32785308..32785316,-#_ea24fa935f6b043451af56f5445061bap@chr2:32785308..32785316, -
3.07e-86FFCP PHASE2:Mm9::chr15:75882346..75882372,-#_ea24fa935f6b043451af56f5445061bap@chr15:75882346..75882372, -
3.07e-86FFCP PHASE2:Mm9::chr1:75130147..75130152,-#_ea24fa935f6b043451af56f5445061bap@chr1:75130147..75130152, -
3.07e-86FFCP PHASE2:Mm9::chr17:35161081..35161090,+#_ea24fa935f6b043451af56f5445061bap@chr17:35161081..35161090, +
3.07e-86FFCP PHASE1:Mm9::chr9:14480480..14480485,-#_ea24fa935f6b043451af56f5445061bap@chr9:14480480..14480485, -
3.07e-86FFCP PHASE2:Mm9::chr1:71780113..71780133,+#_ea24fa935f6b043451af56f5445061bap@chr1:71780113..71780133, +
3.07e-86FFCP PHASE1:Mm9::chr4:118547872..118547876,+#_ea24fa935f6b043451af56f5445061bap@chr4:118547872..118547876, +
3.07e-86FFCP PHASE2:Mm9::chr9:14480492..14480498,-#_ea24fa935f6b043451af56f5445061bap@chr9:14480492..14480498, -
3.07e-86FFCP PHASE1:Mm9::chr19:44408344..44408356,+#_ea24fa935f6b043451af56f5445061bap@chr19:44408344..44408356, +
3.07e-86FFCP PHASE2:Mm9::chr12:61822745..61822749,+#_ea24fa935f6b043451af56f5445061bap@chr12:61822745..61822749, +
3.07e-86FFCP PHASE2:Mm9::chr1:144508809..144508810,+#_ea24fa935f6b043451af56f5445061bap@chr1:144508809..144508810, +
3.07e-86FFCP PHASE1:Mm9::chr11:54720278..54720283,+#_ea24fa935f6b043451af56f5445061bap@chr11:54720278..54720283, +
3.07e-86FFCP PHASE1:Mm9::chrX:96225919..96225928,-#_ea24fa935f6b043451af56f5445061bap@chrX:96225919..96225928, -
3.07e-86FFCP PHASE1:Mm9::chr3:31883134..31883152,+#_ea24fa935f6b043451af56f5445061bap@chr3:31883134..31883152, +
3.07e-86FFCP PHASE1:Mm9::chr15:66960457..66960458,-#_ea24fa935f6b043451af56f5445061bap@chr15:66960457..66960458, -
3.07e-86FFCP PHASE2:Mm9::chr5:7972470..7972501,+#_ea24fa935f6b043451af56f5445061bap@chr5:7972470..7972501, +
3.07e-86FFCP PHASE2:Mm9::chr14:117347211..117347216,-#_ea24fa935f6b043451af56f5445061bap@chr14:117347211..117347216, -
3.07e-86FFCP PHASE1:Mm9::chr12:61822745..61822749,+#_ea24fa935f6b043451af56f5445061bap@chr12:61822745..61822749, +
3.07e-86FFCP PHASE1:Mm9::chr11:11953937..11953941,+#_ea24fa935f6b043451af56f5445061bap@chr11:11953937..11953941, +
3.07e-86FFCP PHASE1:Mm9::chr1:144508809..144508810,+#_ea24fa935f6b043451af56f5445061bap@chr1:144508809..144508810, +
3.07e-86FFCP PHASE1:Mm9::chr11:78250793..78250794,-#_ea24fa935f6b043451af56f5445061bap@chr11:78250793..78250794, -
3.07e-86FFCP PHASE2:Mm9::chr1:156969548..156969555,+#_ea24fa935f6b043451af56f5445061bap@chr1:156969548..156969555, +
3.07e-86FFCP PHASE2:Mm9::chr19:44408344..44408356,+#_ea24fa935f6b043451af56f5445061bap@chr19:44408344..44408356, +
3.07e-86FFCP PHASE1:Mm9::chr8:109945451..109945458,-#_ea24fa935f6b043451af56f5445061bap2@Nob1
3.07e-86FFCP PHASE2:Mm9::chr5:123402694..123402698,-#_ea24fa935f6b043451af56f5445061bap34@Kdm2b
3.07e-86FFCP PHASE2:Mm9::chr11:8479207..8479215,-#_ea24fa935f6b043451af56f5445061bap21@Tns3
3.07e-86FFCP PHASE1:Mm9::chr2:132106890..132106933,+#_ea24fa935f6b043451af56f5445061bap@chr2:132106890..132106933, +
3.07e-86FFCP PHASE2:Mm9::chr1:155253611..155253631,+#_ea24fa935f6b043451af56f5445061bap@chr1:155253611..155253631, +
3.07e-86FFCP PHASE2:Mm9::chr2:145704607..145704614,+#_ea24fa935f6b043451af56f5445061bap@chr2:145704607..145704614, +
3.07e-86FFCP PHASE2:Mm9::chr13:13955172..13955179,-#_ea24fa935f6b043451af56f5445061bap@chr13:13955172..13955179, -
3.07e-86FFCP PHASE1:Mm9::chr1:71760739..71760747,+#_ea24fa935f6b043451af56f5445061bap@chr1:71760739..71760747, +
3.07e-86FFCP PHASE2:Mm9::chr15:66960457..66960458,-#_ea24fa935f6b043451af56f5445061bap@chr15:66960457..66960458, -
3.07e-86FFCP PHASE1:Mm9::chr17:88082166..88082167,-#_ea24fa935f6b043451af56f5445061bap@chr17:88082166..88082167, -
3.07e-86FFCP PHASE1:Mm9::chr11:8479207..8479215,-#_ea24fa935f6b043451af56f5445061bap21@Tns3

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