CL:0000548

Name:	animal cell
Namespace:	cell

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0000255(eukaryotic cell)

Children

is a:	CL:0000039 (germ line cell),CL:0000066 (epithelial cell),CL:0000186 (myofibroblast cell),CL:0000187 (muscle cell),CL:0000349 (extraembryonic cell),CL:0000988 (hematopoietic cell),CL:0001035 (bone cell),CL:0002319 (neural cell),CL:0002320 (connective tissue cell),CL:0002321 (embryonic cell),CL:0002494 (cardiocyte),CL:1000497 (kidney cell),CL:1000600 (lower urinary tract cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
• 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
• 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
• 10408-106B3 (lung adenocarcinoma cell line:PC-14)
• 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
• 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
• 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
• 10412-106B7 (malignant trichilemmal cyst cell line:DJM-1)
• 10413-106B8 (glioma cell line:GI-1)
• 10415-106C1 (gall bladder carcinoma cell line:TGBC2TKB)

... further results Mouse (Mus musculus)

• 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
• 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
• 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
• 10408-106B3 (lung adenocarcinoma cell line:PC-14)
• 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
• 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
• 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
• 10412-106B7 (malignant trichilemmal cyst cell line:DJM-1)
• 10413-106B8 (glioma cell line:GI-1)
• 10415-106C1 (gall bladder carcinoma cell line:TGBC2TKB)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000548 (animal cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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No analysis results for this cluster