UBERON:0002224
From FANTOM5_SSTAR
Name: | thoracic cavity | |
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Definition: | "Body cavity subdivision which is enclosed by the thoracic wall and the diaphragm[FMA]." [FMA:7565, Wikipedia:Thoracic_cavity] | |
Xrefs: |
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Synonyms: |
"cavitas thoracis" RELATED LATIN [Wikipedia:Thoracic_cavity] "cavity of chest" EXACT [] "cavity of thorax" EXACT [] "chest cavity" EXACT [] "pectoral cavity" EXACT [] "space of thoracic compartment" EXACT [FMA:7565] | |
Comments: | This class was created automatically from a combination of ontologies | |
Alt_id: | UBERON:FMA_7565-MA_0000032 | |
Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000464(anatomical space) |
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Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10015-101C6 (esophagus, adult, pool1)
- 10019-101D1 (lung, adult, pool1)
- 10029-101E2 (trachea, adult, pool1)
- 10058-101H4 (trachea, fetal, donor1)
- 10068-101I5 (lung, fetal, donor1)
- 10075-102A3 (lung, right lower lobe, adult, donor1)
- 10090-102B9
- 10099-102C9
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10446-106F5
... further results Mouse (Mus musculus)
- 10015-101C6 (esophagus, adult, pool1)
- 10019-101D1 (lung, adult, pool1)
- 10029-101E2 (trachea, adult, pool1)
- 10058-101H4 (trachea, fetal, donor1)
- 10068-101I5 (lung, fetal, donor1)
- 10075-102A3 (lung, right lower lobe, adult, donor1)
- 10090-102B9
- 10099-102C9
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10446-106F5
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002224 (thoracic cavity), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data