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NonredundantMotifs:88

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Revision as of 14:08, 30 April 2013 by Autoedit (talk | contribs) (Created page with "{{Known_motif |entrez_gene_id=30827 |motif_cluster_2013_march_motif_members= /JASPAR:MA0133.1;BRCA1 /HOCOMOCO:BRCA1_f1~CXXC1_si |name=known88 |representative_motif_db=HO...")
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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :known88
  • db :HOCOMOCO
  • Id :CXXC1_si
  • name  :
  • score :0.09273821432906415
  • External refs:
EntrezGene:30827
UniProt:30827

  • Internal refs:
EntrezGene:30827


Motif matrix
{{{PWM}}}

Sub Motif Members