NonredundantMotifs:65

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known65
• db :UNIPROBE
• Id :Gmeb1_secondary
• name :SCI09
• score :0.48838353073623125
  
• External refs:

EntrezGene:10691
UniProt:10691

• Internal refs:

EntrezGene:10691

Motif matrix

P0 A C G T 1 0.171801268021359 0.139044669546891 0.265726262551171 0.423427799880579 2 0.146596658867561 0.118316133720996 0.577770295308537 0.157316912102905 3 0.247220107940536 0.191958250197233 0.432934963748745 0.127886678113486 4 0.119276597932449 0.232190913824341 0.39478558232841 0.253746905914801 5 0.227546273197179 0.664337925307098 0.0169910812960097 0.0911247201997123 6 0.27129000948291 0.146818938031769 0.518707235663286 0.0631838168220354 7 0.693351081732599 0.120941898623978 0.0668632665649568 0.118843753078466 8 0.0414592676270053 0.895990133603803 0.0422530582604952 0.0202975405086965 9 0.0202975405086965 0.0422530582604952 0.895990133603803 0.0414592676270053 10 0.118843753078466 0.0668632665649568 0.120941898623978 0.693351081732599 11 0.0631838168220354 0.518707235663286 0.146818938031769 0.27129000948291 12 0.0911247201997123 0.0169910812960098 0.664337925307098 0.22754627319718 13 0.122588689281357 0.186958929807665 0.078274324956417 0.612178055954561 14 0.103039017771895 0.27471909730558 0.113320329609324 0.508921555313201 15 0.375945452081216 0.28903990386458 0.127861454685645 0.207153189368559 16 0.429988760669549 0.189119885668972 0.110126757054164 0.270764596607315