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NonredundantMotifs:86

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :known86
  • db :SWISSREGULON
  • Id :HIC1.p2
  • name :HIC1
  • score :4.112744468815355
  • External refs:
EntrezGene:HIC1
UniProt:HIC1

  • Internal refs:
EntrezGene:HIC1


Motif matrix
POACGT
116.036779400.314749252.832396129.158191
2169.486854190.263125323.424616115.16752
3136.043167132.386673514.35531615.556959
40152.717526608.73816436.886425
587.81531720.287084658.06780332.171911
657.783052222.554348387.860645130.14407
708.3817852.084045787.876284999999
802.563355795.7787599999990
90798.34211499999900
1082.278891545.320491121.39098949.351744
1111.84575574.518785182.65490929.322671
1246.628883217.985566500.58596533.141701
1378.74285446.229578000001261.59476311.774924
14162.355746173.656868385.50427176.82523
1555.120838275.577444429.54125138.102582
1622.65987212.894476481.44372481.344045
1766.22211452.036894000001229.19331350.889798
1816.696347420.451095000001270.61830290.576371

Sub Motif Members