FFCP PHASE1:Hg19::chr12:54332652..54332671,+
From FANTOM5_SSTAR
Short description: | p2@HOXC13 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HOXC13_5end |
Coexpression cluster: | C2216_keratoacanthoma_cervical_synovial_Wilms_gastric_oral_mesothelioma |
Association with transcript: | 76bp_to_NM_017410, uc001sei.2, uc010sop.1_5end |
EntrezGene: | HOXC13 |
HGNC: | 5125 |
UniProt: | P31276 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@HOXC13 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 9.30e-14 | 253 |
squamous epithelial cell | 1.43e-09 | 63 |
mammary gland epithelial cell | 3.60e-09 | 4 |
skeletal muscle myoblast | 1.59e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.44e-31 | 9 |
upper respiratory tract | 3.16e-17 | 19 |
mammary gland | 3.60e-09 | 4 |
mammary bud | 3.60e-09 | 4 |
mammary ridge | 3.60e-09 | 4 |
mammary placode | 3.60e-09 | 4 |
mucosa of oral region | 4.24e-09 | 4 |
respiratory system mucosa | 4.24e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.01e-21 | 106 |
cell type cancer | 3.29e-21 | 143 |
cancer | 8.22e-18 | 235 |
disease of cellular proliferation | 3.07e-17 | 239 |
squamous cell carcinoma | 5.13e-12 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.