Personal tools

UBERON:0000178

From FANTOM5_SSTAR

Revision as of 13:25, 27 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:blood
Definition:"Circulating body substance which consists of blood plasma and hemoglobin-carrying red blood cells. Excludes blood analogues (see UBERON:0000179 haemolymphatic fluid)." [FMA:9670, Wikipedia:Blood]
Xrefs:
links:

AAO:0000046
BTO:0000089
EFO:0000296
EHDAA2:0000176
EHDAA:418
EMAPA:16332
ENVO:02000027
EV:0100047
FMA:9670
GAID:965
galen:Blood
MA:0000059
MESH:A.12.207.152
MIAA:0000315
ncithesaurus:Blood
OpenCyc:Mx4rvVjI8JwpEbGdrcN5Y29ycA
TAO:0000007
VHOG:0000224
XAO:0000124

ZFA:0000007
Synonyms: "portion of blood" EXACT []
"vertebrate blood" EXACT []
"whole blood" RELATED [BTO:0000089]
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000179(haemolymphatic fluid)
part_of:UBERON:0002390(hematopoietic system),UBERON:0004535(cardiovascular system)



Children

is a:UBERON:0012168 (umbilical cord blood)
derives from:FF:0000135 (human peripheral blood mononuclear cell sample),FF:0010053 (human blood - adult sample)
part of:FF:0000135 (human peripheral blood mononuclear cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000178 (blood), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.41e-121FFCP PHASE2:Hg19::chr1:205236716..205236728,+#_5cbe71b024cd9b3d07a70360b7704051p13@TMCC2
2.41e-121FFCP PHASE1:Hg19::chr1:205236716..205236728,+#_5cbe71b024cd9b3d07a70360b7704051p13@TMCC2
2.31e-117FFCP PHASE1:Hg19::chr4:74847473..74847482,-#_de789d58213172b8ef78611f5411b5a6p@chr4:74847473..74847482, -
2.31e-117FFCP PHASE2:Hg19::chr14:75444134..75444136,-#_de789d58213172b8ef78611f5411b5a6p@chr14:75444134..75444136, -
2.31e-117FFCP PHASE2:Hg19::chr20:54933899..54933911,+#_de789d58213172b8ef78611f5411b5a6p7@FAM210B
2.31e-117FFCP PHASE2:Hg19::chr9:38090057..38090092,+#_de789d58213172b8ef78611f5411b5a6p@chr9:38090057..38090092, +
2.31e-117FFCP PHASE2:Hg19::chr11:125491251..125491253,-#_de789d58213172b8ef78611f5411b5a6p@chr11:125491251..125491253, -
2.31e-117FFCP PHASE1:Hg19::chr9:38090057..38090092,+#_de789d58213172b8ef78611f5411b5a6p@chr9:38090057..38090092, +
2.31e-117FFCP PHASE1:Hg19::chr16:31539534..31539538,+#_de789d58213172b8ef78611f5411b5a6p4@AHSP
2.31e-117FFCP PHASE2:Hg19::chr2:192318775..192318777,-#_de789d58213172b8ef78611f5411b5a6p@chr2:192318775..192318777, -
2.31e-117FFCP PHASE2:Hg19::chr2:127434629..127434640,+#_de789d58213172b8ef78611f5411b5a6p@chr2:127434629..127434640, +
2.31e-117FFCP PHASE1:Hg19::chr11:118962235..118962238,+#_de789d58213172b8ef78611f5411b5a6p5@HMBS
2.31e-117FFCP PHASE1:Hg19::chr12:111678218..111678221,+#_de789d58213172b8ef78611f5411b5a6p@chr12:111678218..111678221, +
2.31e-117FFCP PHASE1:Hg19::chr11:125491251..125491253,-#_de789d58213172b8ef78611f5411b5a6p@chr11:125491251..125491253, -
2.31e-117FFCP PHASE1:Hg19::chr16:29810067..29810071,+#_de789d58213172b8ef78611f5411b5a6p@chr16:29810067..29810071, +
2.31e-117FFCP PHASE1:Hg19::chr7:44973137..44973140,-#_de789d58213172b8ef78611f5411b5a6p@chr7:44973137..44973140, -
2.31e-117FFCP PHASE1:Hg19::chr14:81627978..81627994,-#_de789d58213172b8ef78611f5411b5a6p@chr14:81627978..81627994, -
2.31e-117FFCP PHASE1:Hg19::chr14:75444134..75444136,-#_de789d58213172b8ef78611f5411b5a6p@chr14:75444134..75444136, -
2.31e-117FFCP PHASE2:Hg19::chr11:118962235..118962238,+#_de789d58213172b8ef78611f5411b5a6p5@HMBS
2.31e-117FFCP PHASE1:Hg19::chr20:54933899..54933911,+#_de789d58213172b8ef78611f5411b5a6p7@FAM210B
2.31e-117FFCP PHASE2:Hg19::chr12:111678218..111678221,+#_de789d58213172b8ef78611f5411b5a6p@chr12:111678218..111678221, +
2.31e-117FFCP PHASE1:Hg19::chr14:65501285..65501318,+#_de789d58213172b8ef78611f5411b5a6p@chr14:65501285..65501318, +
2.31e-117FFCP PHASE2:Hg19::chr14:65501285..65501318,+#_de789d58213172b8ef78611f5411b5a6p@chr14:65501285..65501318, +
2.31e-117FFCP PHASE2:Hg19::chr16:31539534..31539538,+#_de789d58213172b8ef78611f5411b5a6p4@AHSP
2.31e-117FFCP PHASE2:Hg19::chr7:44973137..44973140,-#_de789d58213172b8ef78611f5411b5a6p@chr7:44973137..44973140, -
2.31e-117FFCP PHASE2:Hg19::chr11:61044581..61044587,-#_de789d58213172b8ef78611f5411b5a6p@chr11:61044581..61044587, -
2.31e-117FFCP PHASE1:Hg19::chr11:61044581..61044587,-#_de789d58213172b8ef78611f5411b5a6p@chr11:61044581..61044587, -
2.31e-117FFCP PHASE2:Hg19::chr4:74847473..74847482,-#_de789d58213172b8ef78611f5411b5a6p@chr4:74847473..74847482, -
2.31e-117FFCP PHASE1:Hg19::chr2:192318775..192318777,-#_de789d58213172b8ef78611f5411b5a6p@chr2:192318775..192318777, -
2.31e-117FFCP PHASE1:Hg19::chr12:829787..829796,-#_de789d58213172b8ef78611f5411b5a6p@chr12:829787..829796, -
2.31e-117FFCP PHASE2:Hg19::chr17:42336860..42336865,-#_de789d58213172b8ef78611f5411b5a6p@chr17:42336860..42336865, -
2.31e-117FFCP PHASE2:Hg19::chr12:829787..829796,-#_de789d58213172b8ef78611f5411b5a6p@chr12:829787..829796, -
2.31e-117FFCP PHASE2:Hg19::chr16:29810067..29810071,+#_de789d58213172b8ef78611f5411b5a6p@chr16:29810067..29810071, +
2.31e-117FFCP PHASE1:Hg19::chr2:127434629..127434640,+#_de789d58213172b8ef78611f5411b5a6p@chr2:127434629..127434640, +
2.31e-117FFCP PHASE1:Hg19::chr17:42336860..42336865,-#_de789d58213172b8ef78611f5411b5a6p@chr17:42336860..42336865, -
2.31e-117FFCP PHASE2:Hg19::chr14:81627978..81627994,-#_de789d58213172b8ef78611f5411b5a6p@chr14:81627978..81627994, -
8.26e-109FFCP PHASE2:Hg19::chr6:148938884..148938891,+#_91f12306c23fd55c4c1c10cbb4c80127p@chr6:148938884..148938891, +
8.26e-109FFCP PHASE1:Hg19::chr6:148938884..148938891,+#_91f12306c23fd55c4c1c10cbb4c80127p@chr6:148938884..148938891, +
8.26e-109FFCP PHASE1:Hg19::chr2:192701558..192701565,-#_91f12306c23fd55c4c1c10cbb4c80127p@chr2:192701558..192701565, -
8.26e-109FFCP PHASE2:Hg19::chr2:192701558..192701565,-#_91f12306c23fd55c4c1c10cbb4c80127p@chr2:192701558..192701565, -
8.23e-106FFCP PHASE2:Hg19::chr5:95843224..95843228,-#_6a71872975dec3f6aa836d8f78b03e85p@chr5:95843224..95843228, -
8.23e-106FFCP PHASE1:Hg19::chr7:30950369..30950387,+#_6a71872975dec3f6aa836d8f78b03e85p@chr7:30950369..30950387, +
8.23e-106FFCP PHASE1:Hg19::chr6:156352553..156352562,-#_6a71872975dec3f6aa836d8f78b03e85p@chr6:156352553..156352562, -
8.23e-106FFCP PHASE2:Hg19::chr12:30576643..30576644,-#_6a71872975dec3f6aa836d8f78b03e85p@chr12:30576643..30576644, -
8.23e-106FFCP PHASE1:Hg19::chr5:95843224..95843228,-#_6a71872975dec3f6aa836d8f78b03e85p@chr5:95843224..95843228, -
8.23e-106FFCP PHASE2:Hg19::chr6:156352553..156352562,-#_6a71872975dec3f6aa836d8f78b03e85p@chr6:156352553..156352562, -
8.23e-106FFCP PHASE2:Hg19::chr11:76367785..76367794,-#_6a71872975dec3f6aa836d8f78b03e85p5@ENST00000531511
8.23e-106FFCP PHASE1:Hg19::chr11:76367785..76367794,-#_6a71872975dec3f6aa836d8f78b03e85p5@ENST00000531511
8.23e-106FFCP PHASE1:Hg19::chr3:142671745..142671768,-#_6a71872975dec3f6aa836d8f78b03e85p@chr3:142671745..142671768, -
8.23e-106FFCP PHASE1:Hg19::chr17:42335778..42335781,-#_6a71872975dec3f6aa836d8f78b03e85p4@SLC4A1
8.23e-106FFCP PHASE2:Hg19::chr1:154912672..154912683,+#_6a71872975dec3f6aa836d8f78b03e85p@chr1:154912672..154912683, +
8.23e-106FFCP PHASE2:Hg19::chr11:76367970..76367987,-#_6a71872975dec3f6aa836d8f78b03e85p2@ENST00000531511
8.23e-106FFCP PHASE2:Hg19::chr11:5246742..5246755,+#_6a71872975dec3f6aa836d8f78b03e85p7@CU675538
8.23e-106FFCP PHASE1:Hg19::chr10:46076393..46076404,-#_6a71872975dec3f6aa836d8f78b03e85p@chr10:46076393..46076404, -
8.23e-106FFCP PHASE1:Hg19::chr10:8724326..8724327,-#_6a71872975dec3f6aa836d8f78b03e85p@chr10:8724326..8724327, -
8.23e-106FFCP PHASE1:Hg19::chr2:23680232..23680238,-#_6a71872975dec3f6aa836d8f78b03e85p@chr2:23680232..23680238, -
8.23e-106FFCP PHASE2:Hg19::chr2:127434578..127434589,+#_6a71872975dec3f6aa836d8f78b03e85p@chr2:127434578..127434589, +
8.23e-106FFCP PHASE1:Hg19::chr1:154912672..154912683,+#_6a71872975dec3f6aa836d8f78b03e85p@chr1:154912672..154912683, +
8.23e-106FFCP PHASE2:Hg19::chr8:21861540..21861544,+#_6a71872975dec3f6aa836d8f78b03e85p@chr8:21861540..21861544, +
8.23e-106FFCP PHASE2:Hg19::chr10:8724326..8724327,-#_6a71872975dec3f6aa836d8f78b03e85p@chr10:8724326..8724327, -
8.23e-106FFCP PHASE1:Hg19::chr11:5246715..5246726,+#_6a71872975dec3f6aa836d8f78b03e85p8@CU675538
8.23e-106FFCP PHASE2:Hg19::chr3:142671745..142671768,-#_6a71872975dec3f6aa836d8f78b03e85p@chr3:142671745..142671768, -
8.23e-106FFCP PHASE1:Hg19::chr11:76367970..76367987,-#_6a71872975dec3f6aa836d8f78b03e85p2@ENST00000531511
8.23e-106FFCP PHASE2:Hg19::chr12:938316..938322,+#_6a71872975dec3f6aa836d8f78b03e85p@chr12:938316..938322, +
8.23e-106FFCP PHASE2:Hg19::chr10:46076393..46076404,-#_6a71872975dec3f6aa836d8f78b03e85p@chr10:46076393..46076404, -
8.23e-106FFCP PHASE2:Hg19::chr1:161137023..161137027,+#_6a71872975dec3f6aa836d8f78b03e85p@chr1:161137023..161137027, +
8.23e-106FFCP PHASE2:Hg19::chr11:5246715..5246726,+#_6a71872975dec3f6aa836d8f78b03e85p8@CU675538
8.23e-106FFCP PHASE2:Hg19::chr17:42337173..42337177,-#_6a71872975dec3f6aa836d8f78b03e85p@chr17:42337173..42337177, -
8.23e-106FFCP PHASE1:Hg19::chr11:5246742..5246755,+#_6a71872975dec3f6aa836d8f78b03e85p7@CU675538
8.23e-106FFCP PHASE1:Hg19::chr8:21861540..21861544,+#_6a71872975dec3f6aa836d8f78b03e85p@chr8:21861540..21861544, +
8.23e-106FFCP PHASE1:Hg19::chr2:127434578..127434589,+#_6a71872975dec3f6aa836d8f78b03e85p@chr2:127434578..127434589, +
8.23e-106FFCP PHASE1:Hg19::chr1:161137023..161137027,+#_6a71872975dec3f6aa836d8f78b03e85p@chr1:161137023..161137027, +
8.23e-106FFCP PHASE1:Hg19::chr12:30576643..30576644,-#_6a71872975dec3f6aa836d8f78b03e85p@chr12:30576643..30576644, -
8.23e-106FFCP PHASE2:Hg19::chr17:42335778..42335781,-#_6a71872975dec3f6aa836d8f78b03e85p4@SLC4A1
8.23e-106FFCP PHASE2:Hg19::chr2:23680232..23680238,-#_6a71872975dec3f6aa836d8f78b03e85p@chr2:23680232..23680238, -
8.23e-106FFCP PHASE1:Hg19::chr12:938316..938322,+#_6a71872975dec3f6aa836d8f78b03e85p@chr12:938316..938322, +
8.23e-106FFCP PHASE1:Hg19::chr17:42337173..42337177,-#_6a71872975dec3f6aa836d8f78b03e85p@chr17:42337173..42337177, -
8.23e-106FFCP PHASE2:Hg19::chr7:30950369..30950387,+#_6a71872975dec3f6aa836d8f78b03e85p@chr7:30950369..30950387, +
9.3e-106FFCP PHASE2:Hg19::chr7:18520409..18520411,-#_64de04139a7f279fef3692b8f1ae6db7p@chr7:18520409..18520411, -
9.3e-106FFCP PHASE2:Hg19::chr3:39430391..39430424,+#_64de04139a7f279fef3692b8f1ae6db7p@chr3:39430391..39430424, +
9.3e-106FFCP PHASE2:Hg19::chr11:235547..235556,-#_64de04139a7f279fef3692b8f1ae6db7p@chr11:235547..235556, -
9.3e-106FFCP PHASE1:Hg19::chr3:24179318..24179327,+#_64de04139a7f279fef3692b8f1ae6db7p@chr3:24179318..24179327, +
9.3e-106FFCP PHASE2:Hg19::chr3:24179318..24179327,+#_64de04139a7f279fef3692b8f1ae6db7p@chr3:24179318..24179327, +
9.3e-106FFCP PHASE2:Hg19::chr19:17146840..17146843,-#_64de04139a7f279fef3692b8f1ae6db7p@chr19:17146840..17146843, -
9.3e-106FFCP PHASE1:Hg19::chr11:235547..235556,-#_64de04139a7f279fef3692b8f1ae6db7p@chr11:235547..235556, -
9.3e-106FFCP PHASE1:Hg19::chr7:18520409..18520411,-#_64de04139a7f279fef3692b8f1ae6db7p@chr7:18520409..18520411, -
9.3e-106FFCP PHASE1:Hg19::chr3:39430391..39430424,+#_64de04139a7f279fef3692b8f1ae6db7p@chr3:39430391..39430424, +
9.3e-106FFCP PHASE1:Hg19::chr19:17146840..17146843,-#_64de04139a7f279fef3692b8f1ae6db7p@chr19:17146840..17146843, -
1.05e-105FFCP PHASE1:Hg19::chr3:151067996..151068011,-#_5a2ac6136b2ebe1e6020a027dbcc8fffp@chr3:151067996..151068011, -
1.05e-105FFCP PHASE1:Hg19::chr13:59545633..59545635,-#_5a2ac6136b2ebe1e6020a027dbcc8fffp@chr13:59545633..59545635, -
1.05e-105FFCP PHASE2:Hg19::chr3:151067996..151068011,-#_5a2ac6136b2ebe1e6020a027dbcc8fffp@chr3:151067996..151068011, -
1.05e-105FFCP PHASE2:Hg19::chr13:59545633..59545635,-#_5a2ac6136b2ebe1e6020a027dbcc8fffp@chr13:59545633..59545635, -
1.34e-105FFCP PHASE2:Hg19::chr4:99783676..99783681,-#_d31cdd831744daa5a2c78a2103555335p@chr4:99783676..99783681, -
1.34e-105FFCP PHASE1:Hg19::chr4:99783676..99783681,-#_d31cdd831744daa5a2c78a2103555335p@chr4:99783676..99783681, -
1.87e-104FFCP PHASE1:Hg19::chr4:52905409..52905410,-#_6d33d82d03761cae0b2e5b081d04f7b0p@chr4:52905409..52905410, -
1.87e-104FFCP PHASE1:Hg19::chr8:21927844..21927847,+#_6d33d82d03761cae0b2e5b081d04f7b0p@chr8:21927844..21927847, +
1.87e-104FFCP PHASE2:Hg19::chr1:206320318..206320322,+#_6d33d82d03761cae0b2e5b081d04f7b0p8@CTSE
1.87e-104FFCP PHASE2:Hg19::chr4:171855577..171855579,-#_6d33d82d03761cae0b2e5b081d04f7b0p@chr4:171855577..171855579, -
1.87e-104FFCP PHASE1:Hg19::chr1:206320318..206320322,+#_6d33d82d03761cae0b2e5b081d04f7b0p8@CTSE
1.87e-104FFCP PHASE1:Hg19::chr1:17803417..17803419,-#_6d33d82d03761cae0b2e5b081d04f7b0p@chr1:17803417..17803419, -










Property "Property value" (as page type) with input value "UBPROP:0000001 "A complex mixture of cells suspended in a liquid matrix that delivers nutrients to cells and removes wastes. (Source: BioGlossary, www.Biology-Text.com)[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Highly specialized circulating tissue consisting of several types of cells suspended in a fluid medium known as plasma.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000002 "relationship loss: subclass specialized connective tissue (AAO:0000571)[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0000178&oldid=1837296"