CL:0000789
From FANTOM5_SSTAR
Name: | alpha-beta T cell |
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Namespace: | cell;;efo |
Definition: | "A T cell that expresses an alpha-beta T cell receptor complex." [GOC:add, GOC:tfm, ISBN:0781735149] |
Synonyms: |
"alpha-beta T lymphocyte" EXACT [] "alpha-beta T-cell" EXACT [] "alpha-beta T-lymphocyte" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000084(T cell) |
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disjoint_from: | CL:0000798(gamma-delta T cell) |
Children
is a: | CL:0000790 (immature alpha-beta T cell),CL:0000791 (mature alpha-beta T cell) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10768-110F3
- 10777-110G3 (NK T cell leukemia cell line:KHYG-1)
- 11225-116C1 (CD4+ T Cells, donor1)
- 11226-116C2 (CD8+ T Cells, donor1)
- 11306-117C1 (CD4+ T Cells, donor2)
- 11307-117C2 (CD8+ T Cells, donor2)
- 11382-118B5 (CD4+ T Cells, donor3)
- 11383-118B6 (CD8+ T Cells, donor3)
- 11780-124A7 (CD4+CD25+CD45RA+ naive regulatory T cells, donor1)
- 11782-124A9 (CD4+CD25+CD45RA- memory regulatory T cells, donor1)
... further results Mouse (Mus musculus)
- 10768-110F3
- 10777-110G3 (NK T cell leukemia cell line:KHYG-1)
- 11225-116C1 (CD4+ T Cells, donor1)
- 11226-116C2 (CD8+ T Cells, donor1)
- 11306-117C1 (CD4+ T Cells, donor2)
- 11307-117C2 (CD8+ T Cells, donor2)
- 11382-118B5 (CD4+ T Cells, donor3)
- 11383-118B6 (CD8+ T Cells, donor3)
- 11780-124A7 (CD4+CD25+CD45RA+ naive regulatory T cells, donor1)
- 11782-124A9 (CD4+CD25+CD45RA- memory regulatory T cells, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000789 (alpha-beta T cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data