CL:0002595

Name:	smooth muscle cell of the subclavian artery
Namespace:	cell
Definition:	"A smooth muscle cell of the subclavian artery." [GOC:tfm]
Created by:	tmeehan
Creation date:	2011-03-06T05:01:52Z

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0000359(vascular associated smooth muscle cell)
part_of:	UBERON:0001533(subclavian artery)

Children

is a:	CL:0002593 (smooth muscle cell of the internal thoracic artery)
derives from:	FF:0000175 (human smooth muscle cell of subclavian artery sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
• 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
• 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
• 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
• 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
• 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)

Mouse (Mus musculus)

• 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
• 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
• 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
• 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
• 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
• 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002595 (smooth muscle cell of the subclavian artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
1.65e-59	FFCP PHASE2:Hg19::chr19:18319115..18319122,+	p@chr19:18319115..18319122, +
1.65e-59	FFCP PHASE1:Hg19::chr19:18319115..18319122,+	p@chr19:18319115..18319122, +
3.22e-57	FFCP PHASE1:Hg19::chr9:3898831..3898843,-	p@chr9:3898831..3898843, -
3.22e-57	FFCP PHASE2:Hg19::chr9:3898831..3898843,-	p@chr9:3898831..3898843, -
1.94e-51	FFCP PHASE2:Hg19::chr13:67922393..67922399,-	p@chr13:67922393..67922399, -
1.94e-51	FFCP PHASE1:Hg19::chr13:67922393..67922399,-	p@chr13:67922393..67922399, -
2.3e-51	FFCP PHASE2:Hg19::chr8:4812273..4812274,-	p@chr8:4812273..4812274, -
2.3e-51	FFCP PHASE1:Hg19::chr8:4812273..4812274,-	p@chr8:4812273..4812274, -
1.42e-40	FFCP PHASE2:Hg19::chr11:102668160..102668174,+	p@chr11:102668160..102668174, +
1.42e-40	FFCP PHASE1:Hg19::chr11:102668160..102668174,+	p@chr11:102668160..102668174, +
1.48e-40	FFCP PHASE2:Hg19::chr21:29911657..29911665,+	p2@LINC00161
1.48e-40	FFCP PHASE1:Hg19::chr21:29911657..29911665,+	p2@LINC00161
3.31e-40	FFCP PHASE1:Hg19::chr9:3899086..3899097,-	p@chr9:3899086..3899097, -
3.31e-40	FFCP PHASE2:Hg19::chr9:3899086..3899097,-	p@chr9:3899086..3899097, -
3.31e-40	FFCP PHASE2:Hg19::chr6:50692227..50692236,+	p@chr6:50692227..50692236, +
3.31e-40	FFCP PHASE1:Hg19::chr6:50692227..50692236,+	p@chr6:50692227..50692236, +
4.35e-40	FFCP PHASE2:Hg19::chrY:16915943..16915949,-	p1@NLGN4Y-AS1
4.35e-40	FFCP PHASE1:Hg19::chrY:16915943..16915949,-	p1@NLGN4Y-AS1
2.29e-38	FFCP PHASE2:Hg19::chr7:93516564..93516575,+	p@chr7:93516564..93516575, +
2.29e-38	FFCP PHASE1:Hg19::chr7:93516564..93516575,+	p@chr7:93516564..93516575, +
2.0e-36	FFCP PHASE2:Hg19::chr19:55877364..55877367,-	p@chr19:55877364..55877367, -
2.0e-36	FFCP PHASE1:Hg19::chr19:55877364..55877367,-	p@chr19:55877364..55877367, -
2.07e-36	FFCP PHASE2:Hg19::chr6:53359400..53359406,+	p@chr6:53359400..53359406, +
2.07e-36	FFCP PHASE1:Hg19::chr6:53359400..53359406,+	p@chr6:53359400..53359406, +
2.55e-36	FFCP PHASE2:Hg19::chr7:93519591..93519595,-	p9@TFPI2
2.55e-36	FFCP PHASE1:Hg19::chr7:93519591..93519595,-	p9@TFPI2
7.75e-34	FFCP PHASE1:Hg19::chr21:30000326..30000330,+	p@chr21:30000326..30000330, +
7.75e-34	FFCP PHASE2:Hg19::chr21:30000326..30000330,+	p@chr21:30000326..30000330, +
6.67e-33	FFCP PHASE1:Hg19::chr9:3898804..3898817,-	p@chr9:3898804..3898817, -
6.67e-33	FFCP PHASE2:Hg19::chr9:3898804..3898817,-	p@chr9:3898804..3898817, -
9.62e-32	FFCP PHASE2:Hg19::chr4:74702707..74702718,+	p7@CXCL6
9.62e-32	FFCP PHASE1:Hg19::chr4:74702707..74702718,+	p7@CXCL6
2.86e-30	FFCP PHASE2:Hg19::chr11:27723059..27723067,-	p11@BDNF
2.86e-30	FFCP PHASE1:Hg19::chr11:27723059..27723067,-	p11@BDNF
6.35e-30	FFCP PHASE1:Hg19::chr12:63025600..63025629,+	p@chr12:63025600..63025629, +
6.35e-30	FFCP PHASE2:Hg19::chr12:63025600..63025629,+	p@chr12:63025600..63025629, +
1.14e-29	FFCP PHASE1:Hg19::chr7:93515914..93515935,-	p@chr7:93515914..93515935, -
1.14e-29	FFCP PHASE2:Hg19::chr7:93515914..93515935,-	p@chr7:93515914..93515935, -
3.44e-29	FFCP PHASE1:Hg19::chr10:35930025..35930031,-	p1@FZD8
3.44e-29	FFCP PHASE2:Hg19::chr10:35930025..35930031,-	p1@FZD8
5.33e-29	FFCP PHASE2:Hg19::chrX:142113711..142113717,+	p1@SPANXN4
5.33e-29	FFCP PHASE1:Hg19::chrX:142113711..142113717,+	p1@SPANXN4
1.16e-28	FFCP PHASE2:Hg19::chr11:102662218..102662229,-	p@chr11:102662218..102662229, -
1.16e-28	FFCP PHASE1:Hg19::chr11:102662218..102662229,-	p@chr11:102662218..102662229, -
2.11e-28	FFCP PHASE2:Hg19::chr4:54931877..54931892,-	p@chr4:54931877..54931892, -
2.11e-28	FFCP PHASE1:Hg19::chr4:54931877..54931892,-	p@chr4:54931877..54931892, -
4.13e-28	FFCP PHASE1:Hg19::chr9:33797932..33797960,-	p@chr9:33797932..33797960, -
4.13e-28	FFCP PHASE2:Hg19::chr9:33797932..33797960,-	p@chr9:33797932..33797960, -
5.46e-28	FFCP PHASE2:Hg19::chr19:52076425..52076440,+	p2@ZNF175
5.46e-28	FFCP PHASE1:Hg19::chr19:52076425..52076440,+	p2@ZNF175
5.51e-28	FFCP PHASE1:Hg19::chr17:32583293..32583323,-	p@chr17:32583293..32583323, -
5.51e-28	FFCP PHASE2:Hg19::chr17:32583293..32583323,-	p@chr17:32583293..32583323, -
8.03e-28	FFCP PHASE2:Hg19::chr5:150157860..150157883,+	p4@C5orf62
8.03e-28	FFCP PHASE1:Hg19::chr5:150157860..150157883,+	p4@C5orf62
1.46e-27	FFCP PHASE2:Hg19::chr3:172351514..172351536,-	p@chr3:172351514..172351536, -
1.46e-27	FFCP PHASE1:Hg19::chr3:172351514..172351536,-	p@chr3:172351514..172351536, -
1.66e-27	FFCP PHASE2:Hg19::chr2:113587914..113587925,+	p@chr2:113587914..113587925, +
1.66e-27	FFCP PHASE1:Hg19::chr2:113587914..113587925,+	p@chr2:113587914..113587925, +
2.38e-27	FFCP PHASE2:Hg19::chr4:169022528..169022531,+	p@chr4:169022528..169022531, +
2.38e-27	FFCP PHASE1:Hg19::chr4:169022528..169022531,+	p@chr4:169022528..169022531, +
2.72e-27	FFCP PHASE2:Hg19::chr10:77056181..77056190,+	p2@ZNF503-AS1
2.72e-27	FFCP PHASE1:Hg19::chr10:77056181..77056190,+	p2@ZNF503-AS1
2.72e-27	FFCP PHASE1:Hg19::chr18:68919827..68919832,+	p@chr18:68919827..68919832, +
2.72e-27	FFCP PHASE2:Hg19::chr18:68919827..68919832,+	p@chr18:68919827..68919832, +
4.63e-27	FFCP PHASE2:Hg19::chr3:151514337..151514348,+	p@chr3:151514337..151514348, +
4.63e-27	FFCP PHASE1:Hg19::chr3:151514337..151514348,+	p@chr3:151514337..151514348, +
4.63e-27	FFCP PHASE2:Hg19::chr3:157206111..157206139,-	p@chr3:157206111..157206139, -
4.63e-27	FFCP PHASE1:Hg19::chr3:157206111..157206139,-	p@chr3:157206111..157206139, -
6.82e-27	FFCP PHASE1:Hg19::chr5:54281153..54281165,-	p1@AB590689
6.82e-27	FFCP PHASE2:Hg19::chr5:54281153..54281165,-	p1@AB590689
7.86e-27	FFCP PHASE2:Hg19::chr4:74902919..74902931,-	p@chr4:74902919..74902931, -
7.86e-27	FFCP PHASE1:Hg19::chr4:74902919..74902931,-	p@chr4:74902919..74902931, -
9.32e-27	FFCP PHASE2:Hg19::chr7:93519528..93519538,-	p7@TFPI2
9.32e-27	FFCP PHASE1:Hg19::chr7:93519528..93519538,-	p7@TFPI2
1.7e-26	FFCP PHASE2:Hg19::chr11:102668185..102668198,-	p12@MMP1
1.7e-26	FFCP PHASE1:Hg19::chr11:102668185..102668198,-	p12@MMP1
3.65e-26	FFCP PHASE2:Hg19::chr7:93519576..93519598,+	p@chr7:93519576..93519598, +
3.65e-26	FFCP PHASE1:Hg19::chr7:93519576..93519598,+	p@chr7:93519576..93519598, +
4.43e-26	FFCP PHASE2:Hg19::chr1:12010434..12010450,+	p@chr1:12010434..12010450, +
4.43e-26	FFCP PHASE1:Hg19::chr1:12010434..12010450,+	p@chr1:12010434..12010450, +
4.97e-26	FFCP PHASE2:Hg19::chr8:42042635..42042650,-	p4@PLAT
4.97e-26	FFCP PHASE1:Hg19::chr8:42042635..42042650,-	p4@PLAT
8.4e-26	FFCP PHASE1:Hg19::chr7:93515840..93515856,-	p@chr7:93515840..93515856, -
8.4e-26	FFCP PHASE2:Hg19::chr7:93515840..93515856,-	p@chr7:93515840..93515856, -
2.89e-25	FFCP PHASE2:Hg19::chr9:6257179..6257191,+	p@chr9:6257179..6257191, +
2.89e-25	FFCP PHASE1:Hg19::chr9:6257179..6257191,+	p@chr9:6257179..6257191, +
3.95e-25	FFCP PHASE2:Hg19::chr8:42044977..42044996,-	p@chr8:42044977..42044996, -
3.95e-25	FFCP PHASE1:Hg19::chr8:42044977..42044996,-	p@chr8:42044977..42044996, -
4.18e-25	FFCP PHASE2:Hg19::chr21:28216589..28216607,-	p2@ADAMTS1
4.18e-25	FFCP PHASE1:Hg19::chr21:28216589..28216607,-	p2@ADAMTS1
1.2e-24	FFCP PHASE2:Hg19::chr3:112081052..112081065,-	p@chr3:112081052..112081065, -
1.2e-24	FFCP PHASE1:Hg19::chr3:112081052..112081065,-	p@chr3:112081052..112081065, -
2.08e-24	FFCP PHASE2:Hg19::chr3:67141193..67141198,+	p@chr3:67141193..67141198, +
2.08e-24	FFCP PHASE1:Hg19::chr3:67141193..67141198,+	p@chr3:67141193..67141198, +
4.08e-24	FFCP PHASE2:Hg19::chr8:122653115..122653124,-	p7@HAS2
4.08e-24	FFCP PHASE1:Hg19::chr8:122653115..122653124,-	p7@HAS2
4.76e-24	FFCP PHASE2:Hg19::chr9:6256728..6256739,+	p@chr9:6256728..6256739, +
4.76e-24	FFCP PHASE1:Hg19::chr9:6256728..6256739,+	p@chr9:6256728..6256739, +
6.41e-24	FFCP PHASE2:Hg19::chr2:224839877..224839882,+	p@chr2:224839877..224839882, +
6.41e-24	FFCP PHASE1:Hg19::chr2:224839877..224839882,+	p@chr2:224839877..224839882, +

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