CL:1000280
From FANTOM5_SSTAR
Name: | smooth muscle cell of colon | |
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Namespace: | cell | |
Definition: | "A smooth muscle cell that is part of the colon." [GOC:tfm] | |
Xrefs: |
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Synonyms: | "non-striated muscle fiber of colon" EXACT [FMA:15663] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0002504(enteric smooth muscle cell) |
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part_of: | UBERON:0001155(colon) |
Children
derives from: | FF:0000181 (human smooth muscle of colon sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11239-116D6 (Smooth Muscle Cells - Colonic, donor1)
- 11320-117D6 (Smooth Muscle Cells - Colonic, donor2)
- 11396-118D1 (Smooth Muscle Cells - Colonic, donor3)
Mouse (Mus musculus)
- 11239-116D6 (Smooth Muscle Cells - Colonic, donor1)
- 11320-117D6 (Smooth Muscle Cells - Colonic, donor2)
- 11396-118D1 (Smooth Muscle Cells - Colonic, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1000280 (smooth muscle cell of colon), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data