Personal tools

CL:1001319

From FANTOM5_SSTAR

Revision as of 13:52, 8 February 2012 by Autoedit (talk | contribs) (Created page with "{{CL |id=CL:1001319 |name=bladder cell |namespace=cell |def= |xref=KUPO:0001120 |is_a=CL:0000548 |synonym= |comment= |alt_id= |disjoint_from= |union_of= |created_b...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Name:bladder cell
Namespace:cell
Xrefs:
links:
KUPO:0001120


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000548(animal cell)
part_of:UBERON:0001255(urinary bladder)



Children


is a:CL:0002597 (smooth muscle cell of bladder)
derives from:FF:0102868 (bladder transitional cell carcinoma cell line sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1001319 (bladder cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data