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Coexpression cluster:C49

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Full id: C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma



Phase1 CAGE Peaks

Hg19::chr10:101673730..101673781,-p3@DNMBP
Hg19::chr10:118085026..118085031,+p@chr10:118085026..118085031
+
Hg19::chr10:126138622..126138638,-p2@NKX1-2
Hg19::chr10:13390193..13390218,-p4@SEPHS1
Hg19::chr10:13390222..13390246,-p1@SEPHS1
Hg19::chr10:13390252..13390269,-p5@SEPHS1
Hg19::chr10:135042855..135042873,+p@chr10:135042855..135042873
+
Hg19::chr10:135051422..135051430,+p2@VENTX
Hg19::chr10:21581922..21581939,-p@chr10:21581922..21581939
-
Hg19::chr10:21581957..21581984,-p@chr10:21581957..21581984
-
Hg19::chr10:21581987..21581994,-p@chr10:21581987..21581994
-
Hg19::chr10:21581995..21582005,-p@chr10:21581995..21582005
-
Hg19::chr10:58982431..58982442,-p@chr10:58982431..58982442
-
Hg19::chr10:58982443..58982473,-p@chr10:58982443..58982473
-
Hg19::chr10:69039925..69039934,-p@chr10:69039925..69039934
-
Hg19::chr10:75407175..75407186,-p@chr10:75407175..75407186
-
Hg19::chr10:92055064..92055067,+p@chr10:92055064..92055067
+
Hg19::chr10:94833642..94833655,+p1@CYP26A1
Hg19::chr10:94833710..94833721,+p2@CYP26A1
Hg19::chr11:118505854..118505856,+p59@PHLDB1
Hg19::chr11:131123297..131123306,+p2@ENST00000416553
Hg19::chr11:133788673..133788715,-p@chr11:133788673..133788715
-
Hg19::chr11:134146589..134146608,-p@chr11:134146589..134146608
-
Hg19::chr11:17035711..17035737,+p4@OR7E14P
Hg19::chr11:3210693..3210702,+p1@ENST00000455154
Hg19::chr11:59583386..59583418,-p@chr11:59583386..59583418
-
Hg19::chr11:62525488..62525511,-p@chr11:62525488..62525511
-
Hg19::chr11:62525554..62525590,-p@chr11:62525554..62525590
-
Hg19::chr11:68518185..68518213,-p3@MTL5
Hg19::chr11:73703204..73703213,-p1@ENST00000534962
Hg19::chr12:113909667..113909681,-p1@LHX5
Hg19::chr12:113909805..113909830,+p1@ENST00000551357
Hg19::chr12:120808022..120808031,-p@chr12:120808022..120808031
-
Hg19::chr12:122018114..122018137,-p8@KDM2B
Hg19::chr12:122018409..122018432,-p12@KDM2B
Hg19::chr12:12837423..12837501,-p1@GPR19
Hg19::chr12:42878101..42878133,-p6@PRICKLE1
Hg19::chr12:55808623..55808650,-p2@PHC1P1
Hg19::chr12:59721532..59721540,-p@chr12:59721532..59721540
-
Hg19::chr12:59721677..59721683,-p@chr12:59721677..59721683
-
Hg19::chr12:7941942..7941949,+p3@NANOG
Hg19::chr12:7941989..7942014,+p1@NANOG
Hg19::chr12:9066419..9066470,+p3@PHC1
Hg19::chr12:9066472..9066482,+p8@PHC1
Hg19::chr12:9067527..9067542,+p@chr12:9067527..9067542
+
Hg19::chr12:9067566..9067591,+p@chr12:9067566..9067591
+
Hg19::chr12:95942538..95942549,-p7@USP44
Hg19::chr12:95945132..95945163,-p2@USP44
Hg19::chr12:95945196..95945210,-p5@USP44
Hg19::chr12:95945213..95945244,-p3@USP44
Hg19::chr12:95945246..95945270,-p4@USP44
Hg19::chr12:97858864..97858882,+p@chr12:97858864..97858882
+
Hg19::chr12:97858908..97858920,+p@chr12:97858908..97858920
+
Hg19::chr12:97858979..97858990,+p@chr12:97858979..97858990
+
Hg19::chr12:97859010..97859021,+p@chr12:97859010..97859021
+
Hg19::chr13:31437608..31437620,+p@chr13:31437608..31437620
+
Hg19::chr13:31437623..31437639,+p@chr13:31437623..31437639
+
Hg19::chr13:38489413..38489420,+p@chr13:38489413..38489420
+
Hg19::chr13:53313884..53313897,-p2@LECT1
Hg19::chr13:53313905..53313964,-p1@LECT1
Hg19::chr13:53314077..53314084,-p5@LECT1
Hg19::chr13:53314109..53314157,-p4@LECT1
Hg19::chr13:54842617..54842628,+p@chr13:54842617..54842628
+
Hg19::chr13:56153143..56153144,-p@chr13:56153143..56153144
-
Hg19::chr13:56156997..56157026,-p@chr13:56156997..56157026
-
Hg19::chr14:21175008..21175030,-p3@ENST00000554286
Hg19::chr14:21175067..21175069,-p4@ENST00000554286
Hg19::chr14:21175070..21175084,-p2@ENST00000554286
Hg19::chr14:21175090..21175105,-p1@ENST00000554286
Hg19::chr14:21296272..21296293,-p@chr14:21296272..21296293
-
Hg19::chr14:22005018..22005040,-p6@SALL2
Hg19::chr14:22005062..22005082,-p7@SALL2
Hg19::chr14:22005197..22005261,-p3@SALL2
Hg19::chr14:22005343..22005364,-p5@SALL2
Hg19::chr14:47573982..47573999,+p@chr14:47573982..47573999
+
Hg19::chr14:48729724..48729726,-p@chr14:48729724..48729726
-
Hg19::chr14:48729843..48729847,-p@chr14:48729843..48729847
-
Hg19::chr14:64653046..64653095,+p@chr14:64653046..64653095
+
Hg19::chr14:74815145..74815202,+p1@VRTN
Hg19::chr14:96342779..96342790,+p5@ENST00000504119
Hg19::chr14:96342861..96342881,+p4@ENST00000504119
Hg19::chr14:96459422..96459424,-p@chr14:96459422..96459424
-
Hg19::chr15:35354346..35354365,-p@chr15:35354346..35354365
-
Hg19::chr15:40213106..40213121,-p5@GPR176
Hg19::chr15:40731950..40731964,+p9@BAHD1
Hg19::chr15:52228372..52228406,-p@chr15:52228372..52228406
-
Hg19::chr15:53097013..53097030,-p2@ENST00000560818
Hg19::chr15:53097083..53097098,-p1@ENST00000560818
Hg19::chr15:57678413..57678419,+p@chr15:57678413..57678419
+
Hg19::chr15:65067687..65067701,-p5@RBPMS2
Hg19::chr15:85144307..85144329,+p2@ZSCAN2
Hg19::chr15:85147104..85147119,+p6@ZSCAN2
Hg19::chr15:85147127..85147142,+p5@ZSCAN2
Hg19::chr15:88579498..88579502,-p@chr15:88579498..88579502
-
Hg19::chr16:14377812..14377847,-p@chr16:14377812..14377847
-
Hg19::chr16:29747108..29747111,+p@chr16:29747108..29747111
+
Hg19::chr16:30935164..30935196,+p2@FBXL19
Hg19::chr16:3149266..3149277,-p2@ZSCAN10
Hg19::chr16:3149278..3149305,-p1@ZSCAN10
Hg19::chr16:65268795..65268836,-p@chr16:65268795..65268836
-
Hg19::chr16:69139617..69139628,+p3@HAS3
Hg19::chr17:27045427..27045451,-p7@RAB34
Hg19::chr17:27045488..27045508,-p12@RAB34
Hg19::chr17:47892398..47892407,+p2@KAT7
Hg19::chr17:65970934..65970949,-p@chr17:65970934..65970949
-
Hg19::chr17:7580758..7580773,-p20@TP53
Hg19::chr17:8066843..8066858,-p20@VAMP2
Hg19::chr18:29399308..29399314,+p@chr18:29399308..29399314
+
Hg19::chr18:29523326..29523366,+p@chr18:29523326..29523366
+
Hg19::chr18:29598576..29598585,+p6@RNF125
Hg19::chr18:3603958..3603976,+p4@ENST00000445581
p4@uc002kmi.2
Hg19::chr18:44526786..44526811,+p4@KATNAL2
Hg19::chr18:56530136..56530199,+p3@ZNF532
Hg19::chr18:76739996..76740012,-p@chr18:76739996..76740012
-
Hg19::chr18:76740023..76740045,-p@chr18:76740023..76740045
-
Hg19::chr18:76740152..76740186,+p2@SALL3
Hg19::chr19:10765673..10765687,+p@chr19:10765673..10765687
+
Hg19::chr19:10765699..10765728,+p@chr19:10765699..10765728
+
Hg19::chr19:12936544..12936548,+p1@CU674986
Hg19::chr19:19748353..19748362,-p@chr19:19748353..19748362
-
Hg19::chr19:23598780..23598811,-p2@ENST00000499882
p2@uc002nrh.1
Hg19::chr19:36164281..36164298,+p@chr19:36164281..36164298
+
Hg19::chr19:36164312..36164325,+p@chr19:36164312..36164325
+
Hg19::chr19:36275677..36275698,+p@chr19:36275677..36275698
+
Hg19::chr19:3933060..3933081,+p3@ITGB1BP3
Hg19::chr19:3933085..3933103,+p4@ITGB1BP3
Hg19::chr19:40006057..40006068,+p2@SELV
Hg19::chr19:50795882..50795891,+p@chr19:50795882..50795891
+
Hg19::chr19:52996047..52996089,+p@chr19:52996047..52996089
+
Hg19::chr19:55593143..55593185,+p5@EPS8L1
Hg19::chr19:55603889..55603900,-p@chr19:55603889..55603900
-
Hg19::chr19:55668143..55668174,-p@chr19:55668143..55668174
-
Hg19::chr19:56163789..56163799,+p@chr19:56163789..56163799
+
Hg19::chr1:114695537..114695554,-p1@SYT6
Hg19::chr1:11751574..11751662,-p3@MAD2L2
Hg19::chr1:11751835..11751892,-p4@MAD2L2
Hg19::chr1:154581144..154581155,-p17@ADAR
Hg19::chr1:154581182..154581204,-p7@ADAR
Hg19::chr1:155402929..155402937,+p1@POU5F1P4
Hg19::chr1:156119979..156120000,+p8@SEMA4A
Hg19::chr1:16174050..16174075,+p7@SPEN
Hg19::chr1:200380921..200380947,+p1@uc010ppi.1
Hg19::chr1:223198500..223198519,-p@chr1:223198500..223198519
-
Hg19::chr1:223202451..223202455,-p@chr1:223202451..223202455
-
Hg19::chr1:24790417..24790440,+p@chr1:24790417..24790440
+
Hg19::chr1:26737253..26737268,+p2@LIN28A
Hg19::chr1:26737274..26737286,+p3@LIN28A
Hg19::chr1:26737292..26737322,+p1@LIN28A
Hg19::chr1:26753181..26753186,+p@chr1:26753181..26753186
+
Hg19::chr1:29063272..29063283,+p14@YTHDF2
Hg19::chr1:29063287..29063301,+p7@YTHDF2
Hg19::chr1:29063305..29063346,+p3@YTHDF2
Hg19::chr1:36020531..36020557,-p8@KIAA0319L
Hg19::chr1:53905039..53905072,-p2@ENST00000443844
Hg19::chr1:53905204..53905220,-p1@ENST00000443844
Hg19::chr1:6260896..6260907,-p13@RPL22
Hg19::chr1:62660375..62660393,+p4@L1TD1
Hg19::chr1:62660484..62660495,+p3@L1TD1
Hg19::chr1:62660501..62660564,+p1@L1TD1
Hg19::chr1:62661928..62661962,+p@chr1:62661928..62661962
+
Hg19::chr1:62661968..62661996,+p@chr1:62661968..62661996
+
Hg19::chr1:62668364..62668368,+p@chr1:62668364..62668368
+
Hg19::chr1:62672541..62672554,+p2@L1TD1
Hg19::chr1:62672658..62672669,+p5@L1TD1
Hg19::chr1:62675452..62675463,+p@chr1:62675452..62675463
+
Hg19::chr1:6304233..6304243,+p1@HES3
Hg19::chr1:63787296..63787311,-p1@ENST00000426393
Hg19::chr1:63787320..63787340,-p2@ENST00000426393
Hg19::chr1:63787569..63787587,-p4@ENST00000426393
Hg19::chr20:3024266..3024272,+p1@GNRH2
Hg19::chr20:31331744..31331765,-p3@COMMD7
Hg19::chr20:31331767..31331783,-p4@COMMD7
Hg19::chr20:31350184..31350200,+p1@DNMT3B
Hg19::chr20:31368212..31368235,+p2@DNMT3B
Hg19::chr20:31369159..31369166,+p@chr20:31369159..31369166
+
Hg19::chr20:31375131..31375149,-p@chr20:31375131..31375149
-
Hg19::chr20:31396006..31396015,+p@chr20:31396006..31396015
+
Hg19::chr20:35200140..35200151,-p@chr20:35200140..35200151
-
Hg19::chr20:35202909..35202963,+p2@TGIF2
p3@C20orf24
Hg19::chr20:38900598..38900615,+p@chr20:38900598..38900615
+
Hg19::chr20:45997861..45997878,-p@chr20:45997861..45997878
-
Hg19::chr20:45997932..45997935,-p@chr20:45997932..45997935
-
Hg19::chr20:45997938..45997948,-p@chr20:45997938..45997948
-
Hg19::chr20:50418128..50418147,-p2@SALL4
Hg19::chr20:50418972..50419029,-p1@SALL4
Hg19::chr20:50419055..50419066,-p3@SALL4
Hg19::chr20:50419071..50419079,-p9@SALL4
Hg19::chr20:62572758..62572766,-p11@UCKL1
Hg19::chr21:46168812..46168831,+p@chr21:46168812..46168831
+
Hg19::chr21:46168834..46168857,+p@chr21:46168834..46168857
+
Hg19::chr22:31495027..31495048,+p@chr22:31495027..31495048
+
Hg19::chr22:38493783..38493794,-p@chr22:38493783..38493794
-
Hg19::chr22:38732156..38732200,-p6@CSNK1E
Hg19::chr22:39413746..39413766,+p@chr22:39413746..39413766
+
Hg19::chr22:39413828..39413848,+p@chr22:39413828..39413848
+
Hg19::chr2:196451015..196451038,+p@chr2:196451015..196451038
+
Hg19::chr2:206949880..206949891,+p8@ENST00000435627
Hg19::chr2:210073840..210073851,-p@chr2:210073840..210073851
-
Hg19::chr2:233285879..233285893,-p@chr2:233285879..233285893
-
Hg19::chr2:233285898..233285907,-p@chr2:233285898..233285907
-
Hg19::chr2:233285930..233285938,-p@chr2:233285930..233285938
-
Hg19::chr2:233285959..233285964,-p@chr2:233285959..233285964
-
Hg19::chr2:233285967..233285976,-p@chr2:233285967..233285976
-
Hg19::chr2:233286046..233286057,-p@chr2:233286046..233286057
-
Hg19::chr2:25475094..25475112,-p3@DNMT3A
Hg19::chr2:42722039..42722056,-p@chr2:42722039..42722056
-
Hg19::chr2:42722152..42722157,-p@chr2:42722152..42722157
-
Hg19::chr2:42795483..42795497,+p16@MTA3
Hg19::chr2:52565599..52565602,+p@chr2:52565599..52565602
+
Hg19::chr2:67559007..67559030,+p@chr2:67559007..67559030
+
Hg19::chr2:67563903..67563912,+p@chr2:67563903..67563912
+
Hg19::chr2:76806798..76806811,+p@chr2:76806798..76806811
+
Hg19::chr2:76826657..76826660,+p@chr2:76826657..76826660
+
Hg19::chr2:76920664..76920667,+p@chr2:76920664..76920667
+
Hg19::chr2:76923698..76923702,+p@chr2:76923698..76923702
+
Hg19::chr2:8016767..8016785,+p@chr2:8016767..8016785
+
Hg19::chr2:88752231..88752245,-p2@FOXI3
Hg19::chr2:88752256..88752265,-p3@FOXI3
Hg19::chr2:88838222..88838224,+p1@ENST00000413234
Hg19::chr2:946414..946430,-p2@ENST00000456949
Hg19::chr2:946431..946448,-p1@ENST00000456949
Hg19::chr2:946449..946463,-p3@ENST00000456949
Hg19::chr3:109033420..109033429,-p@chr3:109033420..109033429
-
Hg19::chr3:109045929..109045945,-p@chr3:109045929..109045945
-
Hg19::chr3:109049145..109049147,-p5@DPPA4
Hg19::chr3:109050105..109050109,-p4@DPPA4
Hg19::chr3:109052194..109052196,-p@chr3:109052194..109052196
-
Hg19::chr3:109056334..109056384,-p1@DPPA4
Hg19::chr3:109056387..109056400,-p2@DPPA4
Hg19::chr3:109056429..109056438,-p3@DPPA4
Hg19::chr3:109056581..109056596,+p1@ENST00000508178
Hg19::chr3:109056615..109056622,+p3@ENST00000508178
Hg19::chr3:112145303..112145318,-p@chr3:112145303..112145318
-
Hg19::chr3:115824309..115824311,-p@chr3:115824309..115824311
-
Hg19::chr3:185300242..185300263,+p8@SENP2
Hg19::chr3:185797682..185797689,-p16@ETV5
Hg19::chr3:185797712..185797746,-p6@ETV5
Hg19::chr3:32858112..32858132,+p@chr3:32858112..32858132
+
Hg19::chr3:32858228..32858237,+p@chr3:32858228..32858237
+
Hg19::chr3:32858319..32858331,+p@chr3:32858319..32858331
+
Hg19::chr3:32858508..32858525,+p@chr3:32858508..32858525
+
Hg19::chr3:32858527..32858538,+p@chr3:32858527..32858538
+
Hg19::chr3:32858554..32858574,+p@chr3:32858554..32858574
+
Hg19::chr3:32858578..32858597,+p@chr3:32858578..32858597
+
Hg19::chr3:32858612..32858631,+p@chr3:32858612..32858631
+
Hg19::chr3:32859593..32859606,+p3@TRIM71
Hg19::chr3:32933438..32933442,+p@chr3:32933438..32933442
+
Hg19::chr3:32937944..32937946,+p@chr3:32937944..32937946
+
Hg19::chr3:46619270..46619296,+p1@TDGF1
Hg19::chr3:57234000..57234014,-p1@HESX1
Hg19::chr3:62936055..62936065,+p2@ENST00000475886
Hg19::chr3:98044020..98044032,-p@chr3:98044020..98044032
-
Hg19::chr4:113568122..113568128,-p@chr4:113568122..113568128
-
Hg19::chr4:113568615..113568631,-p@chr4:113568615..113568631
-
Hg19::chr4:113569337..113569342,-p1@MIR302A
Hg19::chr4:113569516..113569523,-p1@MIR302C
Hg19::chr4:113571650..113571659,+p@chr4:113571650..113571659
+
Hg19::chr4:113573695..113573706,+p@chr4:113573695..113573706
+
Hg19::chr4:165798135..165798147,+p1@LOC100506013
Hg19::chr4:165798277..165798293,+p2@uc003iqv.1
Hg19::chr4:165798298..165798312,+p3@uc003iqv.1
Hg19::chr4:165798317..165798356,+p1@ENST00000515275
p1@uc003iqv.1
Hg19::chr4:187168395..187168407,-p@chr4:187168395..187168407
-
Hg19::chr4:188916918..188916942,+p1@ZFP42
Hg19::chr4:26030535..26030540,+p@chr4:26030535..26030540
+
Hg19::chr4:42294654..42294660,-p@chr4:42294654..42294660
-
Hg19::chr4:54343225..54343238,-p@chr4:54343225..54343238
-
Hg19::chr4:62635341..62635352,-p@chr4:62635341..62635352
-
Hg19::chr4:93197815..93197819,-p@chr4:93197815..93197819
-
Hg19::chr4:93365408..93365414,-p@chr4:93365408..93365414
-
Hg19::chr5:115910646..115910657,-p6@SEMA6A
Hg19::chr5:115910716..115910730,-p5@SEMA6A
Hg19::chr5:12625067..12625085,+p@chr5:12625067..12625085
+
Hg19::chr5:12662855..12662861,+p@chr5:12662855..12662861
+
Hg19::chr5:176558787..176558804,+p@chr5:176558787..176558804
+
Hg19::chr5:25435544..25435548,-p@chr5:25435544..25435548
-
Hg19::chr5:25444309..25444313,-p@chr5:25444309..25444313
-
Hg19::chr5:25444735..25444746,-p@chr5:25444735..25444746
-
Hg19::chr5:28930096..28930106,+p@chr5:28930096..28930106
+
Hg19::chr5:93697927..93697941,-p@chr5:93697927..93697941
-
Hg19::chr5:93698011..93698039,-p@chr5:93698011..93698039
-
Hg19::chr6:105388488..105388535,+p@chr6:105388488..105388535
+
Hg19::chr6:105405563..105405584,+p4@LIN28B
Hg19::chr6:10556030..10556063,+p10@GCNT2
Hg19::chr6:10556088..10556099,+p21@GCNT2
Hg19::chr6:107436524..107436543,-p5@BEND3
Hg19::chr6:121756737..121756744,+p3@GJA1
Hg19::chr6:126066762..126066773,-p@chr6:126066762..126066773
-
Hg19::chr6:131615558..131615562,+p@chr6:131615558..131615562
+
Hg19::chr6:131624969..131624980,+p@chr6:131624969..131624980
+
Hg19::chr6:15022187..15022205,-p@chr6:15022187..15022205
-
Hg19::chr6:15245797..15245818,+p8@JARID2
Hg19::chr6:167641710..167641733,+p@chr6:167641710..167641733
+
Hg19::chr6:167641759..167641804,+p@chr6:167641759..167641804
+
Hg19::chr6:167641809..167641819,+p@chr6:167641809..167641819
+
Hg19::chr6:24403144..24403224,+p1@MRS2
Hg19::chr6:25966448..25966461,+p7@TRIM38
Hg19::chr6:30816014..30816035,-p1@ENST00000442852
Hg19::chr6:31138055..31138073,-p3@POU5F1
Hg19::chr6:31138439..31138475,-p1@POU5F1
Hg19::chr6:33084418..33084441,+p@chr6:33084418..33084441
+
Hg19::chr6:33084479..33084506,+p@chr6:33084479..33084506
+
Hg19::chr6:33084750..33084762,+p@chr6:33084750..33084762
+
Hg19::chr6:43276547..43276569,-p1@CRIP3
Hg19::chr6:43276577..43276588,-p2@CRIP3
Hg19::chr6:4773257..4773270,+p2@CDYL
Hg19::chr6:4773291..4773301,+p8@CDYL
Hg19::chr6:4773312..4773315,+p13@CDYL
Hg19::chr7:100942887..100942911,+p1@ENST00000429254
Hg19::chr7:100942917..100942920,+p2@ENST00000429254
Hg19::chr7:100946049..100946091,+p@chr7:100946049..100946091
+
Hg19::chr7:100951567..100951611,+p1@uc003uyk.1
Hg19::chr7:116096018..116096020,+p@chr7:116096018..116096020
+
Hg19::chr7:138144983..138145011,+p2@TRIM24
Hg19::chr7:2395218..2395237,-p@chr7:2395218..2395237
-
Hg19::chr7:33391564..33391595,+p@chr7:33391564..33391595
+
Hg19::chr7:75889941..75889953,+p@chr7:75889941..75889953
+
Hg19::chr7:78197672..78197686,-p@chr7:78197672..78197686
-
Hg19::chr8:115294306..115294320,+p1@ENST00000520543
Hg19::chr8:132320836..132320868,+p1@ENST00000519695
p1@ENST00000524275
Hg19::chr8:145105424..145105440,+p@chr8:145105424..145105440
+
Hg19::chr8:145701166..145701187,-p2@FOXH1
Hg19::chr8:145701192..145701241,-p1@FOXH1
Hg19::chr8:39759861..39759881,+p3@IDO1
Hg19::chr8:70983443..70983460,-p2@PRDM14
Hg19::chr8:70983462..70983471,-p4@PRDM14
Hg19::chr8:70983476..70983493,-p1@PRDM14
Hg19::chr8:70983506..70983522,-p3@PRDM14
Hg19::chr8:70985091..70985097,-p@chr8:70985091..70985097
-
Hg19::chr8:73921067..73921078,+p3@TERF1
Hg19::chr8:73921136..73921151,+p2@TERF1
Hg19::chr8:841869..841879,+p@chr8:841869..841879
+
Hg19::chr8:91803695..91803706,+p7@NECAB1
Hg19::chr8:91940391..91940398,+p@chr8:91940391..91940398
+
Hg19::chr8:9915231..9915236,+p@chr8:9915231..9915236
+
Hg19::chr9:131446083..131446092,+p14@SET
Hg19::chr9:131446097..131446114,+p4@SET
Hg19::chr9:132549146..132549157,+p@chr9:132549146..132549157
+
Hg19::chr9:72435715..72435739,+p1@C9orf135
Hg19::chr9:72435749..72435764,+p2@C9orf135
Hg19::chr9:85396480..85396482,-p@chr9:85396480..85396482
-
Hg19::chr9:85499033..85499065,+p@chr9:85499033..85499065
+
Hg19::chr9:90025826..90025842,+p@chr9:90025826..90025842
+
Hg19::chrX:102997528..102997540,+p@chrX:102997528..102997540
+
Hg19::chrX:103015274..103015278,+p@chrX:103015274..103015278
+
Hg19::chrX:103021943..103021973,-p@chrX:103021943..103021973
-
Hg19::chrX:113235164..113235187,-p@chrX:113235164..113235187
-
Hg19::chrX:113300804..113300807,+p@chrX:113300804..113300807
+
Hg19::chrX:113841312..113841332,-p@chrX:113841312..113841332
-
Hg19::chrX:114957287..114957307,+p1@ENST00000451869
Hg19::chrX:114957329..114957350,+p1@ENST00000415394
Hg19::chrX:114957368..114957379,+p2@ENST00000415394
Hg19::chrX:128225319..128225335,+p@chrX:128225319..128225335
+
Hg19::chrX:133308067..133308078,-p@chrX:133308067..133308078
-
Hg19::chrX:153095771..153095780,-p19@PDZD4
Hg19::chrX:153095817..153095832,-p3@PDZD4
Hg19::chrX:153095959..153095971,-p10@PDZD4
Hg19::chrX:153095982..153096013,-p2@PDZD4
Hg19::chrX:16186799..16186803,-p@chrX:16186799..16186803
-
Hg19::chrX:16202178..16202185,-p@chrX:16202178..16202185
-
Hg19::chrX:16594524..16594529,+p@chrX:16594524..16594529
+
Hg19::chrX:16595231..16595235,+p@chrX:16595231..16595235
+
Hg19::chrX:2882369..2882397,-p2@ARSE
Hg19::chrX:40944690..40944704,+p1@USP9X
Hg19::chrX:40945779..40945807,+p@chrX:40945779..40945807
+
Hg19::chrX:70150939..70150952,-p1@SLC7A3
Hg19::chrX:95229339..95229345,-p1@ENST00000444292
Hg19::chrX:96565590..96565618,+p@chrX:96565590..96565618
+
Hg19::chrX:97828824..97828848,+p@chrX:97828824..97828848
+


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

"{{{coexpression_dpi_cluster_scores_median}}}" is not a number.

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