Personal tools

UBERON:0001262

From FANTOM5_SSTAR

Revision as of 17:12, 15 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:wall of intestine
Definition:"An anatomical wall that is part of a intestine [Obol]." [OBOL:automatic]
Xrefs:
links:

BTO:0000647
FMA:15949

MA:0002693
Synonyms: "anatomical wall of bowel" EXACT [OBOL:automatic]
"anatomical wall of intestine" EXACT [OBOL:automatic]
"bowel anatomical wall" EXACT [OBOL:automatic]
"bowel wall" EXACT [OBOL:automatic]
"intestinal wall" EXACT []
"intestine anatomical wall" EXACT [OBOL:automatic]
"intestine wall" EXACT []
"wall of bowel" EXACT [OBOL:automatic]
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_15949-MA_0002693

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000060(anatomical wall),UBERON:0004119(endoderm-derived structure)
part_of:UBERON:0000160(intestine)



Children

is a:UBERON:0001168 (wall of small intestine)
part of:UBERON:0001242 (intestinal mucosa)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001262 (wall of intestine), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr9:35801527..35801540,+#_857e3a6d69d70eaa0fb38cc92541ff78p@chr9:35801527..35801540, +
1.55e-98FFCP PHASE2:Hg19::chr9:35801527..35801540,+#_857e3a6d69d70eaa0fb38cc92541ff78p@chr9:35801527..35801540, +
2.4e-66FFCP PHASE1:Hg19::chr6:22919616..22919625,-#_4e6f425f36472563d19b0d236cb983d4p@chr6:22919616..22919625, -
2.4e-66FFCP PHASE2:Hg19::chr6:22919616..22919625,-#_4e6f425f36472563d19b0d236cb983d4p@chr6:22919616..22919625, -
2.4e-66FFCP PHASE1:Hg19::chr9:129830560..129830568,+#_4e6f425f36472563d19b0d236cb983d4p@chr9:129830560..129830568, +
2.4e-66FFCP PHASE1:Hg19::chr7:117329764..117329777,+#_4e6f425f36472563d19b0d236cb983d4p1@ENST00000429014
2.4e-66FFCP PHASE2:Hg19::chr9:129830560..129830568,+#_4e6f425f36472563d19b0d236cb983d4p@chr9:129830560..129830568, +
2.4e-66FFCP PHASE2:Hg19::chr7:117329764..117329777,+#_4e6f425f36472563d19b0d236cb983d4p1@ENST00000429014
2.4e-66FFCP PHASE1:Hg19::chr2:127873614..127873626,+#_4e6f425f36472563d19b0d236cb983d4p@chr2:127873614..127873626, +
2.4e-66FFCP PHASE1:Hg19::chr1:111023361..111023366,+#_4e6f425f36472563d19b0d236cb983d4p1@CYMP
2.4e-66FFCP PHASE1:Hg19::chr18:7034928..7034943,-#_4e6f425f36472563d19b0d236cb983d4p@chr18:7034928..7034943, -
2.4e-66FFCP PHASE2:Hg19::chr2:127873614..127873626,+#_4e6f425f36472563d19b0d236cb983d4p@chr2:127873614..127873626, +
2.4e-66FFCP PHASE2:Hg19::chr1:111023361..111023366,+#_4e6f425f36472563d19b0d236cb983d4p1@CYMP
2.4e-66FFCP PHASE1:Hg19::chr13:46093155..46093164,+#_4e6f425f36472563d19b0d236cb983d4p@chr13:46093155..46093164, +
2.4e-66FFCP PHASE2:Hg19::chr13:46093155..46093164,+#_4e6f425f36472563d19b0d236cb983d4p@chr13:46093155..46093164, +
2.4e-66FFCP PHASE2:Hg19::chr18:7034928..7034943,-#_4e6f425f36472563d19b0d236cb983d4p@chr18:7034928..7034943, -
3.35e-66FFCP PHASE2:Hg19::chrX:21849506..21849512,-#_841ae4c2d47b68a9e23bee7d35addac6p@chrX:21849506..21849512, -
3.35e-66FFCP PHASE1:Hg19::chr20:17691468..17691474,-#_841ae4c2d47b68a9e23bee7d35addac6p@chr20:17691468..17691474, -
3.35e-66FFCP PHASE2:Hg19::chr20:17691468..17691474,-#_841ae4c2d47b68a9e23bee7d35addac6p@chr20:17691468..17691474, -
3.35e-66FFCP PHASE1:Hg19::chr2:205409703..205409714,+#_841ae4c2d47b68a9e23bee7d35addac6p@chr2:205409703..205409714, +
3.35e-66FFCP PHASE2:Hg19::chr2:205409703..205409714,+#_841ae4c2d47b68a9e23bee7d35addac6p@chr2:205409703..205409714, +
3.35e-66FFCP PHASE1:Hg19::chr1:6420713..6420725,-#_841ae4c2d47b68a9e23bee7d35addac6p16@ACOT7
3.35e-66FFCP PHASE2:Hg19::chr1:6420713..6420725,-#_841ae4c2d47b68a9e23bee7d35addac6p16@ACOT7
3.35e-66FFCP PHASE1:Hg19::chrX:21849506..21849512,-#_841ae4c2d47b68a9e23bee7d35addac6p@chrX:21849506..21849512, -
4.67e-66FFCP PHASE2:Hg19::chr11:89925073..89925074,+#_02cdbf82db2c1464b01c68c1af1128a8p@chr11:89925073..89925074, +
4.67e-66FFCP PHASE1:Hg19::chr11:89925073..89925074,+#_02cdbf82db2c1464b01c68c1af1128a8p@chr11:89925073..89925074, +
4.67e-66FFCP PHASE1:Hg19::chr2:28340361..28340371,+#_02cdbf82db2c1464b01c68c1af1128a8p@chr2:28340361..28340371, +
4.67e-66FFCP PHASE2:Hg19::chr2:28340361..28340371,+#_02cdbf82db2c1464b01c68c1af1128a8p@chr2:28340361..28340371, +
4.67e-66FFCP PHASE1:Hg19::chr9:138591077..138591111,-#_02cdbf82db2c1464b01c68c1af1128a8p@chr9:138591077..138591111, -
4.67e-66FFCP PHASE2:Hg19::chr9:138591077..138591111,-#_02cdbf82db2c1464b01c68c1af1128a8p@chr9:138591077..138591111, -
3.83e-60FFCP PHASE1:Mm9::chr16:30055801..30055806,+#_1202225f8b9bd29ad9081f62f08a966bp@chr16:30055801..30055806, +
3.83e-60FFCP PHASE2:Mm9::chr16:30055801..30055806,+#_1202225f8b9bd29ad9081f62f08a966bp@chr16:30055801..30055806, +
3.16e-55FFCP PHASE1:Mm9::chr3:122215917..122215967,-#_d58a338f63792a6a6b4ca6c959e8ecbap@chr3:122215917..122215967, -
3.16e-55FFCP PHASE2:Mm9::chr3:122215917..122215967,-#_d58a338f63792a6a6b4ca6c959e8ecbap@chr3:122215917..122215967, -
1.47e-53FFCP PHASE1:Mm9::chr18:75457242..75457248,+#_9baa89bed6272fd363cc835cc45aa5c6p@chr18:75457242..75457248, +
1.47e-53FFCP PHASE2:Mm9::chr18:75457242..75457248,+#_9baa89bed6272fd363cc835cc45aa5c6p@chr18:75457242..75457248, +
1.5e-53FFCP PHASE2:Mm9::chr5:135442349..135442362,-#_bc36e624b728eb23387a65a1d9cfbf97p@chr5:135442349..135442362, -
1.5e-53FFCP PHASE1:Mm9::chr5:135442349..135442362,-#_bc36e624b728eb23387a65a1d9cfbf97p@chr5:135442349..135442362, -
1.94e-53FFCP PHASE2:Mm9::chr8:122335239..122335244,+#_d90d14e24d624456335f914166d7e128p@chr8:122335239..122335244, +
1.94e-53FFCP PHASE1:Mm9::chr8:122335239..122335244,+#_d90d14e24d624456335f914166d7e128p@chr8:122335239..122335244, +
7.2e-52FFCP PHASE2:Mm9::chr18:61795043..61795050,-#_a5c43b89845f6aa59f7359efbf8aea9ep@chr18:61795043..61795050, -
7.2e-52FFCP PHASE1:Mm9::chr18:61795043..61795050,-#_a5c43b89845f6aa59f7359efbf8aea9ep@chr18:61795043..61795050, -
1.66e-51FFCP PHASE2:Mm9::chr7:4101973..4101978,-#_576f814a674b48bfb86543f9312764cbp4@Leng9
1.66e-51FFCP PHASE1:Mm9::chr7:4101973..4101978,-#_576f814a674b48bfb86543f9312764cbp4@Leng9
3.1e-50FFCP PHASE2:Hg19::chr1:78621016..78621042,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr1:78621016..78621042, +
3.1e-50FFCP PHASE2:Hg19::chr15:60749901..60749904,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr15:60749901..60749904, -
3.1e-50FFCP PHASE1:Hg19::chr1:163338283..163338286,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr1:163338283..163338286, +
3.1e-50FFCP PHASE1:Hg19::chr12:65277574..65277589,+#_e3f4ae0417f6c971b473e930dbc3ba2cp2@FLJ41278
3.1e-50FFCP PHASE2:Hg19::chr9:98505341..98505348,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr9:98505341..98505348, +
3.1e-50FFCP PHASE2:Hg19::chr16:55344418..55344442,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr16:55344418..55344442, +
3.1e-50FFCP PHASE1:Hg19::chr9:125898916..125898941,-#_e3f4ae0417f6c971b473e930dbc3ba2cp14@STRBP
3.1e-50FFCP PHASE2:Hg19::chr4:157174062..157174071,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr4:157174062..157174071, +
3.1e-50FFCP PHASE2:Hg19::chr8:127568784..127568794,+#_e3f4ae0417f6c971b473e930dbc3ba2cp6@ENST00000524320
3.1e-50FFCP PHASE2:Hg19::chr13:28541425..28541439,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr13:28541425..28541439, -
3.1e-50FFCP PHASE1:Hg19::chr14:26793415..26793426,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr14:26793415..26793426, -
3.1e-50FFCP PHASE2:Hg19::chr6:372660..372670,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr6:372660..372670, -
3.1e-50FFCP PHASE1:Hg19::chr9:104610923..104610939,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr9:104610923..104610939, -
3.1e-50FFCP PHASE1:Hg19::chr8:127440115..127440120,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr8:127440115..127440120, +
3.1e-50FFCP PHASE2:Hg19::chr1:19522690..19522704,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr1:19522690..19522704, -
3.1e-50FFCP PHASE2:Hg19::chr8:127438794..127438800,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr8:127438794..127438800, +
3.1e-50FFCP PHASE2:Hg19::chr6:91774965..91774974,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr6:91774965..91774974, +
3.1e-50FFCP PHASE1:Hg19::chr1:93128346..93128356,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr1:93128346..93128356, -
3.1e-50FFCP PHASE2:Hg19::chr8:128415915..128415922,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr8:128415915..128415922, +
3.1e-50FFCP PHASE1:Hg19::chr16:53671764..53671771,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr16:53671764..53671771, -
3.1e-50FFCP PHASE2:Hg19::chr1:163338283..163338286,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr1:163338283..163338286, +
3.1e-50FFCP PHASE2:Hg19::chr13:99661014..99661016,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr13:99661014..99661016, -
3.1e-50FFCP PHASE2:Hg19::chr3:156822661..156822696,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr3:156822661..156822696, -
3.1e-50FFCP PHASE1:Hg19::chr8:128415944..128415958,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr8:128415944..128415958, +
3.1e-50FFCP PHASE2:Hg19::chr9:125898916..125898941,-#_e3f4ae0417f6c971b473e930dbc3ba2cp14@STRBP
3.1e-50FFCP PHASE2:Hg19::chr1:93128346..93128356,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr1:93128346..93128356, -
3.1e-50FFCP PHASE1:Hg19::chr3:148164659..148164667,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr3:148164659..148164667, -
3.1e-50FFCP PHASE1:Hg19::chr12:68155058..68155064,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr12:68155058..68155064, -
3.1e-50FFCP PHASE1:Hg19::chr6:8446968..8446983,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr6:8446968..8446983, +
3.1e-50FFCP PHASE1:Hg19::chr2:205036975..205037009,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr2:205036975..205037009, -
3.1e-50FFCP PHASE2:Hg19::chr3:140054724..140054735,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr3:140054724..140054735, -
3.1e-50FFCP PHASE2:Hg19::chr9:104610923..104610939,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr9:104610923..104610939, -
3.1e-50FFCP PHASE2:Hg19::chr5:97747048..97747059,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr5:97747048..97747059, +
3.1e-50FFCP PHASE2:Hg19::chr16:53671764..53671771,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr16:53671764..53671771, -
3.1e-50FFCP PHASE1:Hg19::chr3:185823573..185823578,-#_e3f4ae0417f6c971b473e930dbc3ba2cp26@ETV5
3.1e-50FFCP PHASE1:Hg19::chr7:137749883..137749887,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr7:137749883..137749887, +
3.1e-50FFCP PHASE1:Hg19::chr2:127711416..127711419,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr2:127711416..127711419, +
3.1e-50FFCP PHASE1:Hg19::chr13:46093198..46093203,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr13:46093198..46093203, +
3.1e-50FFCP PHASE2:Hg19::chr8:128418828..128418839,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr8:128418828..128418839, -
3.1e-50FFCP PHASE1:Hg19::chr4:157174075..157174084,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr4:157174075..157174084, +
3.1e-50FFCP PHASE2:Hg19::chr6:8446968..8446983,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr6:8446968..8446983, +
3.1e-50FFCP PHASE2:Hg19::chr2:205036975..205037009,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr2:205036975..205037009, -
3.1e-50FFCP PHASE1:Hg19::chr8:128419359..128419367,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr8:128419359..128419367, -
3.1e-50FFCP PHASE1:Hg19::chr1:118658073..118658082,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr1:118658073..118658082, -
3.1e-50FFCP PHASE1:Hg19::chr8:39792182..39792188,+#_e3f4ae0417f6c971b473e930dbc3ba2cp14@IDO2
3.1e-50FFCP PHASE2:Hg19::chr13:46093198..46093203,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr13:46093198..46093203, +
3.1e-50FFCP PHASE1:Hg19::chr7:89797154..89797172,+#_e3f4ae0417f6c971b473e930dbc3ba2cp9@STEAP2
3.1e-50FFCP PHASE2:Hg19::chr7:87232440..87232448,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr7:87232440..87232448, -
3.1e-50FFCP PHASE1:Hg19::chr8:128259602..128259609,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr8:128259602..128259609, -
3.1e-50FFCP PHASE1:Hg19::chr3:24797750..24797759,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr3:24797750..24797759, -
3.1e-50FFCP PHASE1:Hg19::chr13:28541442..28541451,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr13:28541442..28541451, -
3.1e-50FFCP PHASE2:Hg19::chr8:128118744..128118753,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr8:128118744..128118753, -
3.1e-50FFCP PHASE2:Hg19::chr7:137749883..137749887,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr7:137749883..137749887, +
3.1e-50FFCP PHASE1:Hg19::chr3:139373728..139373733,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr3:139373728..139373733, +
3.1e-50FFCP PHASE1:Hg19::chr18:39550015..39550034,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr18:39550015..39550034, +
3.1e-50FFCP PHASE1:Hg19::chr8:127681013..127681042,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr8:127681013..127681042, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0001262&oldid=1832595"