Personal tools

UBERON:0003060

From FANTOM5_SSTAR

Revision as of 17:17, 15 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:pronephric duct
Definition:"In mammals, the pronephric duct is the predecessor of the Wolffian duct[WP]." [Wikipedia:Pronephric_duct]
Xrefs:
links:

AAO:0011088
ncithesaurus:Pronephric_Duct
SCTID:361406002
TAO:0000150
VHOG:0000082
XAO:0000063

ZFA:0000150
Synonyms: "archinephric duct" RELATED [VHOG:0000082]
Alt_id: UBERON:XAO_0000063-ZFA_0000150
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0009201(nephric duct)
develops_from:UBERON:0003064(intermediate mesoderm),UBERON:0005721(pronephric mesoderm)
part_of:UBERON:0002120(pronephros)



Children

develops from:UBERON:0003074 (mesonephric duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003060 (pronephric duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_17f9453cc1074c62296fe60e07a39be4p4@Spink12
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_17f9453cc1074c62296fe60e07a39be4p4@Spink12
3.28e-58FFCP PHASE1:Mm9::chr1:89597834..89597840,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:89597834..89597840, +
3.28e-58FFCP PHASE2:Mm9::chr6:18338054..18338077,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr6:18338054..18338077, -
3.28e-58FFCP PHASE2:Mm9::chr9:26731771..26731780,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr9:26731771..26731780, -
3.28e-58FFCP PHASE2:Mm9::chr7:109379335..109379338,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep21@Pgap2
3.28e-58FFCP PHASE1:Mm9::chr7:151928014..151928021,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr7:151928014..151928021, +
3.28e-58FFCP PHASE2:Mm9::chr1:192816674..192816714,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:192816674..192816714, +
3.28e-58FFCP PHASE2:Mm9::chr2:148676901..148676906,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep8@9230104L09Rik
3.28e-58FFCP PHASE1:Mm9::chr6:49817766..49817772,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr6:49817766..49817772, -
3.28e-58FFCP PHASE2:Mm9::chr8:22061721..22061728,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep2@Gm6040, p2@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chr11:34107562..34107572,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr11:34107562..34107572, -
3.28e-58FFCP PHASE2:Mm9::chr1:155722142..155722175,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:155722142..155722175, -
3.28e-58FFCP PHASE1:Mm9::chr9:100350777..100350782,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr9:100350777..100350782, +
3.28e-58FFCP PHASE1:Mm9::chr2:75866210..75866235,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr2:75866210..75866235, +
3.28e-58FFCP PHASE1:Mm9::chr13:21379065..21379072,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr13:21379065..21379072, -
3.28e-58FFCP PHASE1:Mm9::chr8:126591032..126591039,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr8:126591032..126591039, +
3.28e-58FFCP PHASE1:Mm9::chr2:167688595..167688624,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr2:167688595..167688624, +
3.28e-58FFCP PHASE2:Mm9::chrX:10488683..10488691,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chrX:10488683..10488691, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379322..21379338,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr13:21379322..21379338, -
3.28e-58FFCP PHASE1:Mm9::chr17:35249011..35249020,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr17:35249011..35249020, -
3.28e-58FFCP PHASE2:Mm9::chr9:35651807..35651818,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep3@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr12:103896072..103896081,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr12:103896072..103896081, -
3.28e-58FFCP PHASE1:Mm9::chr1:87922962..87922982,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:87922962..87922982, +
3.28e-58FFCP PHASE2:Mm9::chr1:36016859..36016897,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:36016859..36016897, +
3.28e-58FFCP PHASE2:Mm9::chr14:52542711..52542716,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep2@Rnase13
3.28e-58FFCP PHASE2:Mm9::chr14:103837894..103837900,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr14:103837894..103837900, +
3.28e-58FFCP PHASE1:Mm9::chr8:19141471..19141518,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr8:19141471..19141518, -
3.28e-58FFCP PHASE2:Mm9::chr12:110131610..110131621,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep11@Wars
3.28e-58FFCP PHASE1:Mm9::chr6:18338054..18338077,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr6:18338054..18338077, -
3.28e-58FFCP PHASE1:Mm9::chr5:112721323..112721328,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr5:112721323..112721328, +
3.28e-58FFCP PHASE2:Mm9::chr8:19141447..19141469,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr8:19141447..19141469, +
3.28e-58FFCP PHASE2:Mm9::chr11:20817297..20817313,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr11:20817297..20817313, +
3.28e-58FFCP PHASE1:Mm9::chr4:134893699..134893708,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr4:134893699..134893708, +
3.28e-58FFCP PHASE2:Mm9::chr1:90156002..90156013,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:90156002..90156013, +
3.28e-58FFCP PHASE1:Mm9::chr1:165219453..165219469,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep11@Prrx1
3.28e-58FFCP PHASE1:Mm9::chr18:62775330..62775347,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr18:62775330..62775347, -
3.28e-58FFCP PHASE1:Mm9::chrX:50280181..50280192,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chrX:50280181..50280192, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379972..31379981,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr5:31379972..31379981, +
3.28e-58FFCP PHASE1:Mm9::chr2:148676859..148676866,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep5@9230104L09Rik
3.28e-58FFCP PHASE2:Mm9::chr13:21379125..21379144,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr13:21379125..21379144, -
3.28e-58FFCP PHASE1:Mm9::chr9:70761931..70761971,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr9:70761931..70761971, +
3.28e-58FFCP PHASE1:Mm9::chr9:26599476..26599505,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep3@Glb1l2
3.28e-58FFCP PHASE2:Mm9::chr11:59845404..59845416,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr11:59845404..59845416, -
3.28e-58FFCP PHASE2:Mm9::chr5:31379486..31379501,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr5:31379486..31379501, +
3.28e-58FFCP PHASE1:Mm9::chrX:130496166..130496188,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chrX:130496166..130496188, -
3.28e-58FFCP PHASE1:Mm9::chr9:26731771..26731780,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr9:26731771..26731780, -
3.28e-58FFCP PHASE1:Mm9::chr5:110773718..110773729,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr5:110773718..110773729, +
3.28e-58FFCP PHASE2:Mm9::chr8:19062951..19062955,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr8:19062951..19062955, +
3.28e-58FFCP PHASE1:Mm9::chr2:158083961..158083968,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep4@Bpi
3.28e-58FFCP PHASE2:Mm9::chr1:43367743..43367754,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:43367743..43367754, -
3.28e-58FFCP PHASE1:Mm9::chr11:116901629..116901639,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep3@uc007mmw.1
3.28e-58FFCP PHASE2:Mm9::chr11:96150839..96150842,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr11:96150839..96150842, -
3.28e-58FFCP PHASE1:Mm9::chr7:65995799..65995810,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr7:65995799..65995810, -
3.28e-58FFCP PHASE2:Mm9::chr5:110773795..110773801,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr5:110773795..110773801, +
3.28e-58FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr5:35930667..35930691, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379377..31379384,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr5:31379377..31379384, +
3.28e-58FFCP PHASE2:Mm9::chr16:28323634..28323657,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr16:28323634..28323657, -
3.28e-58FFCP PHASE1:Mm9::chr2:164479340..164479350,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr2:164479340..164479350, +
3.28e-58FFCP PHASE2:Mm9::chr13:52712765..52712772,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr13:52712765..52712772, +
3.28e-58FFCP PHASE1:Mm9::chr14:52608712..52608739,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep11@Arhgef40
3.28e-58FFCP PHASE1:Mm9::chr13:21379372..21379404,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr13:21379372..21379404, +
3.28e-58FFCP PHASE2:Mm9::chr14:51734060..51734066,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep5@Eddm3b
3.28e-58FFCP PHASE2:Mm9::chr9:35715997..35716008,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep1@9230113P08Rik
3.28e-58FFCP PHASE1:Mm9::chr2:152388977..152388983,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr2:152388977..152388983, +
3.28e-58FFCP PHASE1:Mm9::chr1:90155923..90155932,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:90155923..90155932, +
3.28e-58FFCP PHASE2:Mm9::chr15:75329148..75329155,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr15:75329148..75329155, +
3.28e-58FFCP PHASE1:Mm9::chr2:25678985..25679033,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr2:25678985..25679033, +
3.28e-58FFCP PHASE1:Mm9::chr9:35651807..35651818,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep3@9230110F15Rik
3.28e-58FFCP PHASE2:Mm9::chrX:75798157..75798162,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chrX:75798157..75798162, -
3.28e-58FFCP PHASE1:Mm9::chr2:164439019..164439029,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep1@Wfdc6b
3.28e-58FFCP PHASE2:Mm9::chr11:101958887..101958896,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr11:101958887..101958896, -
3.28e-58FFCP PHASE2:Mm9::chr2:152290340..152290344,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep2@Defb23
3.28e-58FFCP PHASE1:Mm9::chr8:113585667..113585673,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr8:113585667..113585673, -
3.28e-58FFCP PHASE2:Mm9::chr11:53937918..53937922,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep7@P4ha2
3.28e-58FFCP PHASE2:Mm9::chr7:56772735..56772741,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr7:56772735..56772741, +
3.28e-58FFCP PHASE1:Mm9::chr14:51734060..51734066,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep5@Eddm3b
3.28e-58FFCP PHASE2:Mm9::chr9:26599476..26599505,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep3@Glb1l2
3.28e-58FFCP PHASE1:Mm9::chr13:21379159..21379162,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr13:21379159..21379162, -
3.28e-58FFCP PHASE2:Mm9::chr4:106730107..106730125,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr4:106730107..106730125, -
3.28e-58FFCP PHASE1:Mm9::chrX:75798132..75798152,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chrX:75798132..75798152, -
3.28e-58FFCP PHASE2:Mm9::chrX:50280152..50280179,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chrX:50280152..50280179, +
3.28e-58FFCP PHASE2:Mm9::chr13:21380670..21380678,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr13:21380670..21380678, -
3.28e-58FFCP PHASE1:Mm9::chr9:26611214..26611227,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr9:26611214..26611227, -
3.28e-58FFCP PHASE2:Mm9::chrX:20419453..20419476,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chrX:20419453..20419476, +
3.28e-58FFCP PHASE2:Mm9::chr8:126591032..126591039,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr8:126591032..126591039, +
3.28e-58FFCP PHASE1:Mm9::chr1:89596972..89596981,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:89596972..89596981, +
3.28e-58FFCP PHASE2:Mm9::chr3:65253465..65253475,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr3:65253465..65253475, +
3.28e-58FFCP PHASE2:Mm9::chr18:62816857..62816866,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep7@Spink10
3.28e-58FFCP PHASE1:Mm9::chr1:11079838..11079844,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:11079838..11079844, +
3.28e-58FFCP PHASE2:Mm9::chr1:155698166..155698174,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:155698166..155698174, -
3.28e-58FFCP PHASE1:Mm9::chr11:53955299..53955306,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr11:53955299..53955306, +
3.28e-58FFCP PHASE1:Mm9::chr8:96014490..96014496,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr8:96014490..96014496, +
3.28e-58FFCP PHASE1:Mm9::chr4:137325863..137325870,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep15@Alpl
3.28e-58FFCP PHASE1:Mm9::chr14:51676936..51676963,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep6@Rnase12
3.28e-58FFCP PHASE2:Mm9::chr11:63779573..63779582,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr11:63779573..63779582, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379261..21379264,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr13:21379261..21379264, -
3.28e-58FFCP PHASE1:Mm9::chr15:83143938..83143953,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr15:83143938..83143953, -
3.28e-58FFCP PHASE2:Mm9::chr9:35651650..35651673,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep4@9230110F15Rik
3.28e-58FFCP PHASE2:Mm9::chr1:11079838..11079844,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:11079838..11079844, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0003060&oldid=1832908"