Personal tools

UBERON:0007376

From FANTOM5_SSTAR

Revision as of 17:25, 15 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:outer epithelial layer
Definition:"The epidermis is the entire outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species[GO]. The epidermis of a more complex invertebrate is just one-layer deep, and may be protected by a non-cellular cuticle. The epidermis of a higher vertebrate has many layers, and the outer layers are reinforced with keratin and then die[WP]." [Wikipedia:Epidermis_(zoology)]
Xrefs:
links:

FBbt:00004993
HAO:0000298
TADS:0000109

WBbt:0005733
Synonyms: "epidermis" NARROW [GO:0008544]
"hypodermis" RELATED INCONSISTENT [GO:0008544, WBbt:0005733]
"outer epidermal layer" EXACT []
Subset: grouping_class

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000483(epithelium),UBERON:0003102(surface structure)



Children

is a:UBERON:0001003 (skin epidermis)
part of:CL:0000362 (epidermal cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007376 (outer epithelial layer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.4e-86FFCP PHASE1:Mm9::chr4:113836063..113836075,+#_b16b93c98cbe7782d166a5c37413843ep1@Skint11
1.4e-86FFCP PHASE2:Mm9::chr4:113836042..113836053,+#_b16b93c98cbe7782d166a5c37413843ep2@Skint11
1.4e-86FFCP PHASE1:Mm9::chr1:191609138..191609151,+#_b16b93c98cbe7782d166a5c37413843ep@chr1:191609138..191609151, +
1.4e-86FFCP PHASE1:Mm9::chr11:36246521..36246530,-#_b16b93c98cbe7782d166a5c37413843ep@chr11:36246521..36246530, -
1.4e-86FFCP PHASE2:Mm9::chr11:99227413..99227429,-#_b16b93c98cbe7782d166a5c37413843ep@chr11:99227413..99227429, -
1.4e-86FFCP PHASE2:Mm9::chr4:113836063..113836075,+#_b16b93c98cbe7782d166a5c37413843ep1@Skint11
1.4e-86FFCP PHASE2:Mm9::chr5:137057540..137057550,-#_b16b93c98cbe7782d166a5c37413843ep@chr5:137057540..137057550, -
1.4e-86FFCP PHASE1:Mm9::chr11:94981134..94981147,+#_b16b93c98cbe7782d166a5c37413843ep2@Dlx3
1.4e-86FFCP PHASE2:Mm9::chr13:113381448..113381495,-#_b16b93c98cbe7782d166a5c37413843ep@chr13:113381448..113381495, -
1.4e-86FFCP PHASE1:Mm9::chr15:101593988..101593997,-#_b16b93c98cbe7782d166a5c37413843ep1@Krt74
1.4e-86FFCP PHASE2:Mm9::chr1:191609138..191609151,+#_b16b93c98cbe7782d166a5c37413843ep@chr1:191609138..191609151, +
1.4e-86FFCP PHASE1:Mm9::chr11:99227413..99227429,-#_b16b93c98cbe7782d166a5c37413843ep@chr11:99227413..99227429, -
1.4e-86FFCP PHASE2:Mm9::chr11:36246521..36246530,-#_b16b93c98cbe7782d166a5c37413843ep@chr11:36246521..36246530, -
1.4e-86FFCP PHASE2:Mm9::chr15:101593988..101593997,-#_b16b93c98cbe7782d166a5c37413843ep1@Krt74
1.4e-86FFCP PHASE2:Mm9::chr4:138313406..138313411,-#_b16b93c98cbe7782d166a5c37413843ep2@Pla2g2f
1.4e-86FFCP PHASE1:Mm9::chr4:113836042..113836053,+#_b16b93c98cbe7782d166a5c37413843ep2@Skint11
1.4e-86FFCP PHASE1:Mm9::chr4:138313406..138313411,-#_b16b93c98cbe7782d166a5c37413843ep2@Pla2g2f
1.4e-86FFCP PHASE1:Mm9::chr13:113381448..113381495,-#_b16b93c98cbe7782d166a5c37413843ep@chr13:113381448..113381495, -
1.4e-86FFCP PHASE1:Mm9::chr5:137057540..137057550,-#_b16b93c98cbe7782d166a5c37413843ep@chr5:137057540..137057550, -
1.4e-86FFCP PHASE2:Mm9::chr11:94981134..94981147,+#_b16b93c98cbe7782d166a5c37413843ep2@Dlx3
1.07e-72FFCP PHASE2:Mm9::chr15:83953604..83953633,-#_ab50f2c2a5b082d1226f8e7c9566880bp1@Pnpla5
1.07e-72FFCP PHASE1:Mm9::chr15:83953604..83953633,-#_ab50f2c2a5b082d1226f8e7c9566880bp1@Pnpla5
1.07e-72FFCP PHASE1:Mm9::chr3:90343597..90343613,+#_ab50f2c2a5b082d1226f8e7c9566880bp@chr3:90343597..90343613, +
1.07e-72FFCP PHASE1:Mm9::chr7:97432305..97432311,+#_ab50f2c2a5b082d1226f8e7c9566880bp@chr7:97432305..97432311, +
1.07e-72FFCP PHASE1:Mm9::chr7:127260268..127260277,+#_ab50f2c2a5b082d1226f8e7c9566880bp@chr7:127260268..127260277, +
1.07e-72FFCP PHASE2:Mm9::chr3:90343597..90343613,+#_ab50f2c2a5b082d1226f8e7c9566880bp@chr3:90343597..90343613, +
1.07e-72FFCP PHASE2:Mm9::chr1:46949894..46949911,-#_ab50f2c2a5b082d1226f8e7c9566880bp@chr1:46949894..46949911, -
1.07e-72FFCP PHASE1:Mm9::chr5:137057441..137057450,-#_ab50f2c2a5b082d1226f8e7c9566880bp@chr5:137057441..137057450, -
1.07e-72FFCP PHASE2:Mm9::chr11:99207849..99207853,-#_ab50f2c2a5b082d1226f8e7c9566880bp@chr11:99207849..99207853, -
1.07e-72FFCP PHASE2:Mm9::chr5:137057441..137057450,-#_ab50f2c2a5b082d1226f8e7c9566880bp@chr5:137057441..137057450, -
1.07e-72FFCP PHASE2:Mm9::chr7:97432305..97432311,+#_ab50f2c2a5b082d1226f8e7c9566880bp@chr7:97432305..97432311, +
1.07e-72FFCP PHASE1:Mm9::chr11:99207849..99207853,-#_ab50f2c2a5b082d1226f8e7c9566880bp@chr11:99207849..99207853, -
1.07e-72FFCP PHASE1:Mm9::chr5:137057490..137057506,-#_ab50f2c2a5b082d1226f8e7c9566880bp@chr5:137057490..137057506, -
1.07e-72FFCP PHASE1:Mm9::chr1:133938531..133938534,-#_ab50f2c2a5b082d1226f8e7c9566880bp6@Mfsd4
1.07e-72FFCP PHASE2:Mm9::chr7:127260268..127260277,+#_ab50f2c2a5b082d1226f8e7c9566880bp@chr7:127260268..127260277, +
1.07e-72FFCP PHASE2:Mm9::chr5:137057490..137057506,-#_ab50f2c2a5b082d1226f8e7c9566880bp@chr5:137057490..137057506, -
1.07e-72FFCP PHASE2:Mm9::chr1:133938531..133938534,-#_ab50f2c2a5b082d1226f8e7c9566880bp6@Mfsd4
1.07e-72FFCP PHASE1:Mm9::chr1:46949894..46949911,-#_ab50f2c2a5b082d1226f8e7c9566880bp@chr1:46949894..46949911, -
1.5e-72FFCP PHASE2:Mm9::chr1:37973257..37973271,-#_902eea3bc12db94b4f184c07cba599a5p2@Lyg2
1.5e-72FFCP PHASE2:Mm9::chr15:25672069..25672077,+#_902eea3bc12db94b4f184c07cba599a5p25@Myo10
1.5e-72FFCP PHASE1:Mm9::chr1:37973330..37973344,-#_902eea3bc12db94b4f184c07cba599a5p1@Lyg2
1.5e-72FFCP PHASE2:Mm9::chr1:37973330..37973344,-#_902eea3bc12db94b4f184c07cba599a5p1@Lyg2
1.5e-72FFCP PHASE1:Mm9::chr13:112045218..112045226,+#_902eea3bc12db94b4f184c07cba599a5p1@Actbl2
1.5e-72FFCP PHASE1:Mm9::chr3:138004932..138004945,+#_902eea3bc12db94b4f184c07cba599a5p@chr3:138004932..138004945, +
1.5e-72FFCP PHASE1:Mm9::chr6:134595955..134595965,-#_902eea3bc12db94b4f184c07cba599a5p@chr6:134595955..134595965, -
1.5e-72FFCP PHASE1:Mm9::chr6:97778311..97778326,+#_902eea3bc12db94b4f184c07cba599a5p@chr6:97778311..97778326, +
1.5e-72FFCP PHASE2:Mm9::chr10:43724117..43724131,-#_902eea3bc12db94b4f184c07cba599a5p@chr10:43724117..43724131, -
1.5e-72FFCP PHASE1:Mm9::chr15:25672069..25672077,+#_902eea3bc12db94b4f184c07cba599a5p25@Myo10
1.5e-72FFCP PHASE2:Mm9::chr3:138004932..138004945,+#_902eea3bc12db94b4f184c07cba599a5p@chr3:138004932..138004945, +
1.5e-72FFCP PHASE1:Mm9::chr10:43724117..43724131,-#_902eea3bc12db94b4f184c07cba599a5p@chr10:43724117..43724131, -
1.5e-72FFCP PHASE2:Mm9::chr10:66991117..66991146,+#_902eea3bc12db94b4f184c07cba599a5p@chr10:66991117..66991146, +
1.5e-72FFCP PHASE2:Mm9::chr13:112045218..112045226,+#_902eea3bc12db94b4f184c07cba599a5p1@Actbl2
1.5e-72FFCP PHASE1:Mm9::chr10:66991117..66991146,+#_902eea3bc12db94b4f184c07cba599a5p@chr10:66991117..66991146, +
1.5e-72FFCP PHASE2:Mm9::chr6:134595955..134595965,-#_902eea3bc12db94b4f184c07cba599a5p@chr6:134595955..134595965, -
1.5e-72FFCP PHASE1:Mm9::chr1:37973257..37973271,-#_902eea3bc12db94b4f184c07cba599a5p2@Lyg2
1.5e-72FFCP PHASE2:Mm9::chr6:97778311..97778326,+#_902eea3bc12db94b4f184c07cba599a5p@chr6:97778311..97778326, +
2.1e-72FFCP PHASE1:Mm9::chr7:117436977..117436981,-#_af59c401765c35637add1bd23b9bd616p@chr7:117436977..117436981, -
2.1e-72FFCP PHASE1:Mm9::chr4:82496625..82496637,-#_af59c401765c35637add1bd23b9bd616p6@Zdhhc21
2.1e-72FFCP PHASE2:Mm9::chr4:111707315..111707319,+#_af59c401765c35637add1bd23b9bd616p@chr4:111707315..111707319, +
2.1e-72FFCP PHASE2:Mm9::chr1:89485356..89485361,+#_af59c401765c35637add1bd23b9bd616p@chr1:89485356..89485361, +
2.1e-72FFCP PHASE1:Mm9::chr1:89485356..89485361,+#_af59c401765c35637add1bd23b9bd616p@chr1:89485356..89485361, +
2.1e-72FFCP PHASE2:Mm9::chr7:117436977..117436981,-#_af59c401765c35637add1bd23b9bd616p@chr7:117436977..117436981, -
2.1e-72FFCP PHASE2:Mm9::chr4:82496625..82496637,-#_af59c401765c35637add1bd23b9bd616p6@Zdhhc21
2.1e-72FFCP PHASE1:Mm9::chr4:111707315..111707319,+#_af59c401765c35637add1bd23b9bd616p@chr4:111707315..111707319, +
4.13e-72FFCP PHASE1:Mm9::chr4:113672105..113672116,-#_c175d4adf8a8cbbc7e197813b49c8c12p1@Skint5
4.13e-72FFCP PHASE2:Mm9::chr4:113672105..113672116,-#_c175d4adf8a8cbbc7e197813b49c8c12p1@Skint5
1.65e-69FFCP PHASE1:Mm9::chr15:101770858..101770865,-#_b22648cca231035b73c4584b9585d74dp2@Krt79
1.65e-69FFCP PHASE1:Mm9::chr3:93248462..93248471,+#_b22648cca231035b73c4584b9585d74dp@chr3:93248462..93248471, +
1.65e-69FFCP PHASE1:Mm9::chr9:67169769..67169780,-#_b22648cca231035b73c4584b9585d74dp@chr9:67169769..67169780, -
1.65e-69FFCP PHASE1:Mm9::chr1:192537956..192537958,+#_b22648cca231035b73c4584b9585d74dp@chr1:192537956..192537958, +
1.65e-69FFCP PHASE1:Mm9::chr1:129125186..129125194,+#_b22648cca231035b73c4584b9585d74dp@chr1:129125186..129125194, +
1.65e-69FFCP PHASE2:Mm9::chr15:12444430..12444439,-#_b22648cca231035b73c4584b9585d74dp@chr15:12444430..12444439, -
1.65e-69FFCP PHASE1:Mm9::chr4:57351817..57351823,-#_b22648cca231035b73c4584b9585d74dp@chr4:57351817..57351823, -
1.65e-69FFCP PHASE2:Mm9::chr4:144155170..144155177,-#_b22648cca231035b73c4584b9585d74dp2@Gm13124
1.65e-69FFCP PHASE2:Mm9::chr11:95086849..95086855,-#_b22648cca231035b73c4584b9585d74dp3@ENSMUST00000150818
1.65e-69FFCP PHASE2:Mm9::chr14:57868950..57868959,+#_b22648cca231035b73c4584b9585d74dp@chr14:57868950..57868959, +
1.65e-69FFCP PHASE1:Mm9::chr6:144579044..144579056,-#_b22648cca231035b73c4584b9585d74dp@chr6:144579044..144579056, -
1.65e-69FFCP PHASE2:Mm9::chr3:93249391..93249400,+#_b22648cca231035b73c4584b9585d74dp@chr3:93249391..93249400, +
1.65e-69FFCP PHASE1:Mm9::chr16:56831943..56831948,-#_b22648cca231035b73c4584b9585d74dp14@Tmem45a
1.65e-69FFCP PHASE1:Mm9::chr5:81472249..81472294,+#_b22648cca231035b73c4584b9585d74dp@chr5:81472249..81472294, +
1.65e-69FFCP PHASE2:Mm9::chr1:46949977..46949981,-#_b22648cca231035b73c4584b9585d74dp@chr1:46949977..46949981, -
1.65e-69FFCP PHASE2:Mm9::chr10:82296700..82296710,+#_b22648cca231035b73c4584b9585d74dp12@Txnrd1
1.65e-69FFCP PHASE2:Mm9::chr3:93248697..93248704,+#_b22648cca231035b73c4584b9585d74dp@chr3:93248697..93248704, +
1.65e-69FFCP PHASE2:Mm9::chr5:137057650..137057655,-#_b22648cca231035b73c4584b9585d74dp@chr5:137057650..137057655, -
1.65e-69FFCP PHASE1:Mm9::chr14:57868950..57868959,+#_b22648cca231035b73c4584b9585d74dp@chr14:57868950..57868959, +
1.65e-69FFCP PHASE1:Mm9::chr11:95086849..95086855,-#_b22648cca231035b73c4584b9585d74dp3@ENSMUST00000150818
1.65e-69FFCP PHASE2:Mm9::chr4:144311356..144311370,-#_b22648cca231035b73c4584b9585d74dp2@Gm13178
1.65e-69FFCP PHASE2:Mm9::chr16:56831979..56831988,-#_b22648cca231035b73c4584b9585d74dp13@Tmem45a
1.65e-69FFCP PHASE1:Mm9::chr1:46949977..46949981,-#_b22648cca231035b73c4584b9585d74dp@chr1:46949977..46949981, -
1.65e-69FFCP PHASE1:Mm9::chr4:82496602..82496610,-#_b22648cca231035b73c4584b9585d74dp8@Zdhhc21
1.65e-69FFCP PHASE2:Mm9::chr3:93247570..93247579,+#_b22648cca231035b73c4584b9585d74dp@chr3:93247570..93247579, +
1.65e-69FFCP PHASE2:Mm9::chr6:97778346..97778356,+#_b22648cca231035b73c4584b9585d74dp@chr6:97778346..97778356, +
1.65e-69FFCP PHASE2:Mm9::chr18:20469239..20469258,+#_b22648cca231035b73c4584b9585d74dp2@Dsg1a
1.65e-69FFCP PHASE1:Mm9::chr4:144311334..144311342,-#_b22648cca231035b73c4584b9585d74dp3@Gm13178
1.65e-69FFCP PHASE2:Mm9::chr17:14011908..14011919,+#_b22648cca231035b73c4584b9585d74dp13@Mllt4
1.65e-69FFCP PHASE2:Mm9::chr6:144579044..144579056,-#_b22648cca231035b73c4584b9585d74dp@chr6:144579044..144579056, -
1.65e-69FFCP PHASE2:Mm9::chr3:93249466..93249478,+#_b22648cca231035b73c4584b9585d74dp@chr3:93249466..93249478, +
1.65e-69FFCP PHASE2:Mm9::chr3:93247460..93247471,+#_b22648cca231035b73c4584b9585d74dp@chr3:93247460..93247471, +
1.65e-69FFCP PHASE1:Mm9::chr6:97778294..97778306,+#_b22648cca231035b73c4584b9585d74dp@chr6:97778294..97778306, +
1.65e-69FFCP PHASE1:Mm9::chr3:59629633..59629644,+#_b22648cca231035b73c4584b9585d74dp@chr3:59629633..59629644, +