CL:0000542
From FANTOM5_SSTAR
Name: | lymphocyte | |
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Namespace: | cell;;efo | |
Definition: | "A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin." [GOC:add, ISBN:0683073696, ISBN:0781735149] | |
Xrefs: |
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Comments: | Editors note: consider adding taxon constraint to vertebrata (PMID:18025161) |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0002087(nongranular leukocyte),CL:0002242(nucleate cell) |
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disjoint_from: | CL:0000766(myeloid leukocyte) |
Children
is a: | CL:0000084 (T cell),CL:0000623 (natural killer cell),CL:0000945 (lymphocyte of B lineage),CL:0002679 (natural helper lymphocyte) |
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disjoint from: | CL:0000451 (dendritic cell) |
derives from: | FF:0100773 (lymphoblastoid cell line sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
- 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
- 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
- 10427-106D4 (b cell line:RPMI1788)
- 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
- 10455-106G5 (acute lymphoblastic leukemia (B-ALL) cell line:BALL-1)
- 10464-106H5 (acute lymphoblastic leukemia (T-ALL) cell line:Jurkat)
- 10467-106H8
- 10474-106I6 (myeloma cell line:PCM6)
- 10476-106I8 (Burkitt's lymphoma cell line:RAJI)
... further results Mouse (Mus musculus)
- 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
- 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
- 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
- 10427-106D4 (b cell line:RPMI1788)
- 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
- 10455-106G5 (acute lymphoblastic leukemia (B-ALL) cell line:BALL-1)
- 10464-106H5 (acute lymphoblastic leukemia (T-ALL) cell line:Jurkat)
- 10467-106H8
- 10474-106I6 (myeloma cell line:PCM6)
- 10476-106I8 (Burkitt's lymphoma cell line:RAJI)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000542 (lymphocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data