CL:0002253

Name:	epithelial cell of large intestine
Namespace:	cell
Definition:	"An epithelial cell of the large intestine." [GOC:tfm]
Xrefs:	Expandlinks: BTO:0004297 FMA:256157
Synonyms:	"epithelial cell of colon" RELATED []
Alt_id:	CL:1000292
Created by:	tmeehan
Creation date:	2010-09-08T09:28:22Z

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0002563(intestinal epithelial cell)

Children

is a:	FF:0100797 (colonic cancer cell line)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 10420-106C6 (colon carcinoma cell line:COLO-320)
• 10511-107D7
• 10513-107D9 (colon carcinoma cell line:CACO-2)
• 10523-107F1
• 10557-107I8
• 10635-108I5
• 10653-109B5

Mouse (Mus musculus)

• 10420-106C6 (colon carcinoma cell line:COLO-320)
• 10511-107D7
• 10513-107D9 (colon carcinoma cell line:CACO-2)
• 10523-107F1
• 10557-107I8
• 10635-108I5
• 10653-109B5

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002253 (epithelial cell of large intestine), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
1.55e-98	FFCP PHASE1:Hg19::chr16:19661585..19661596,+	p@chr16:19661585..19661596, +
1.55e-98	FFCP PHASE1:Hg19::chr10:24726466..24726472,+	p@chr10:24726466..24726472, +
1.55e-98	FFCP PHASE1:Hg19::chr13:48703799..48703838,-	p@chr13:48703799..48703838, -
1.55e-98	FFCP PHASE2:Hg19::chr15:45950558..45950561,+	p@chr15:45950558..45950561, +
1.55e-98	FFCP PHASE2:Hg19::chr9:104610923..104610939,-	p@chr9:104610923..104610939, -
1.55e-98	FFCP PHASE2:Hg19::chr8:127681013..127681042,-	p@chr8:127681013..127681042, -
1.55e-98	FFCP PHASE2:Hg19::chr2:127711472..127711475,+	p@chr2:127711472..127711475, +
1.55e-98	FFCP PHASE1:Hg19::chr6:8389087..8389116,-	p@chr6:8389087..8389116, -
1.55e-98	FFCP PHASE1:Hg19::chr14:26793415..26793426,-	p@chr14:26793415..26793426, -
1.55e-98	FFCP PHASE2:Hg19::chr18:28720966..28720970,+	p@chr18:28720966..28720970, +
1.55e-98	FFCP PHASE2:Hg19::chr10:2328652..2328660,+	p@chr10:2328652..2328660, +
1.55e-98	FFCP PHASE2:Hg19::chr8:127445866..127445873,+	p@chr8:127445866..127445873, +
1.55e-98	FFCP PHASE1:Hg19::chr3:156822661..156822696,-	p@chr3:156822661..156822696, -
1.55e-98	FFCP PHASE1:Hg19::chr8:127568784..127568794,+	p6@ENST00000524320
1.55e-98	FFCP PHASE2:Hg19::chr3:148164872..148164919,-	p@chr3:148164872..148164919, -
1.55e-98	FFCP PHASE2:Hg19::chr2:163302780..163302789,-	p@chr2:163302780..163302789, -
1.55e-98	FFCP PHASE1:Hg19::chr7:30499737..30499761,+	p@chr7:30499737..30499761, +
1.55e-98	FFCP PHASE1:Hg19::chr8:127438794..127438800,+	p@chr8:127438794..127438800, +
1.55e-98	FFCP PHASE1:Hg19::chr9:125898916..125898941,-	p14@STRBP
1.55e-98	FFCP PHASE2:Hg19::chr16:19661615..19661621,+	p@chr16:19661615..19661621, +
1.55e-98	FFCP PHASE2:Hg19::chr13:32790605..32790619,+	p@chr13:32790605..32790619, +
1.55e-98	FFCP PHASE1:Hg19::chr8:128691603..128691614,-	p@chr8:128691603..128691614, -
1.55e-98	FFCP PHASE2:Hg19::chrX:42162203..42162241,+	p@chrX:42162203..42162241, +
1.55e-98	FFCP PHASE1:Hg19::chr7:89797154..89797172,+	p9@STEAP2
1.55e-98	FFCP PHASE2:Hg19::chr8:128807259..128807281,+	p@chr8:128807259..128807281, +
1.55e-98	FFCP PHASE1:Hg19::chr3:185823573..185823578,-	p26@ETV5
1.55e-98	FFCP PHASE2:Hg19::chr1:219739282..219739288,-	p@chr1:219739282..219739288, -
1.55e-98	FFCP PHASE1:Hg19::chr8:128415915..128415922,+	p@chr8:128415915..128415922, +
1.55e-98	FFCP PHASE1:Hg19::chr6:8446968..8446983,+	p@chr6:8446968..8446983, +
1.55e-98	FFCP PHASE2:Hg19::chr18:39550015..39550034,+	p@chr18:39550015..39550034, +
1.55e-98	FFCP PHASE1:Hg19::chr4:157174108..157174136,+	p@chr4:157174108..157174136, +
1.55e-98	FFCP PHASE1:Hg19::chr8:55331615..55331618,+	p@chr8:55331615..55331618, +
1.55e-98	FFCP PHASE1:Hg19::chr2:19707156..19707203,+	p@chr2:19707156..19707203, +
1.55e-98	FFCP PHASE1:Hg19::chr14:22850283..22850310,-	p@chr14:22850283..22850310, -
1.55e-98	FFCP PHASE2:Hg19::chr8:39792182..39792188,+	p14@IDO2
1.55e-98	FFCP PHASE2:Hg19::chr13:54830821..54830841,+	p@chr13:54830821..54830841, +
1.55e-98	FFCP PHASE1:Hg19::chr9:98505341..98505348,+	p@chr9:98505341..98505348, +
1.55e-98	FFCP PHASE2:Hg19::chr6:5491056..5491061,+	p@chr6:5491056..5491061, +
1.55e-98	FFCP PHASE2:Hg19::chr8:128260156..128260173,+	p@chr8:128260156..128260173, +
1.55e-98	FFCP PHASE1:Hg19::chr3:148164659..148164667,-	p@chr3:148164659..148164667, -
1.55e-98	FFCP PHASE2:Hg19::chr4:157174062..157174071,+	p@chr4:157174062..157174071, +
1.55e-98	FFCP PHASE2:Hg19::chr2:66794389..66794398,+	p@chr2:66794389..66794398, +
1.55e-98	FFCP PHASE1:Hg19::chr1:118658073..118658082,-	p@chr1:118658073..118658082, -
1.55e-98	FFCP PHASE2:Hg19::chr7:87232419..87232430,-	p@chr7:87232419..87232430, -
1.55e-98	FFCP PHASE1:Hg19::chr13:28541442..28541451,-	p@chr13:28541442..28541451, -
1.55e-98	FFCP PHASE1:Hg19::chr16:19661615..19661621,+	p@chr16:19661615..19661621, +
1.55e-98	FFCP PHASE2:Hg19::chr6:91774965..91774974,+	p@chr6:91774965..91774974, +
1.55e-98	FFCP PHASE1:Hg19::chr8:128418828..128418839,-	p@chr8:128418828..128418839, -
1.55e-98	FFCP PHASE2:Hg19::chr1:93128331..93128338,-	p@chr1:93128331..93128338, -
1.55e-98	FFCP PHASE2:Hg19::chr18:53252911..53252918,-	p106@TCF4
1.55e-98	FFCP PHASE1:Hg19::chr7:138064518..138064531,-	p@chr7:138064518..138064531, -
1.55e-98	FFCP PHASE1:Hg19::chr5:97747048..97747059,+	p@chr5:97747048..97747059, +
1.55e-98	FFCP PHASE2:Hg19::chr13:99661014..99661016,-	p@chr13:99661014..99661016, -
1.55e-98	FFCP PHASE1:Hg19::chr7:87049573..87049608,-	p@chr7:87049573..87049608, -
1.55e-98	FFCP PHASE1:Hg19::chr2:148148505..148148515,-	p@chr2:148148505..148148515, -
1.55e-98	FFCP PHASE1:Hg19::chr1:55404829..55404833,-	p@chr1:55404829..55404833, -
1.55e-98	FFCP PHASE1:Hg19::chr8:128118744..128118753,-	p@chr8:128118744..128118753, -
1.55e-98	FFCP PHASE1:Hg19::chr6:8389389..8389429,-	p@chr6:8389389..8389429, -
1.55e-98	FFCP PHASE2:Hg19::chr8:127449395..127449424,+	p@chr8:127449395..127449424, +
1.55e-98	FFCP PHASE2:Hg19::chr3:171088092..171088113,-	p@chr3:171088092..171088113, -
1.55e-98	FFCP PHASE2:Hg19::chr8:128418747..128418756,-	p@chr8:128418747..128418756, -
1.55e-98	FFCP PHASE1:Hg19::chr16:53671764..53671771,-	p@chr16:53671764..53671771, -
1.55e-98	FFCP PHASE1:Hg19::chr3:66354424..66354472,+	p@chr3:66354424..66354472, +
1.55e-98	FFCP PHASE2:Hg19::chr3:148165064..148165071,-	p@chr3:148165064..148165071, -
1.55e-98	FFCP PHASE2:Hg19::chr2:163302793..163302800,-	p@chr2:163302793..163302800, -
1.55e-98	FFCP PHASE1:Hg19::chr15:45950558..45950561,+	p@chr15:45950558..45950561, +
1.55e-98	FFCP PHASE1:Hg19::chrX:138909080..138909093,-	p@chrX:138909080..138909093, -
1.55e-98	FFCP PHASE1:Hg19::chr3:139373728..139373733,+	p@chr3:139373728..139373733, +
1.55e-98	FFCP PHASE1:Hg19::chr8:127440115..127440120,+	p@chr8:127440115..127440120, +
1.55e-98	FFCP PHASE1:Hg19::chr6:372660..372670,-	p@chr6:372660..372670, -
1.55e-98	FFCP PHASE2:Hg19::chr13:32790683..32790693,+	p@chr13:32790683..32790693, +
1.55e-98	FFCP PHASE2:Hg19::chr4:71222797..71222807,+	p@chr4:71222797..71222807, +
1.55e-98	FFCP PHASE1:Hg19::chr2:127711416..127711419,+	p@chr2:127711416..127711419, +
1.55e-98	FFCP PHASE1:Hg19::chr1:19522690..19522704,-	p@chr1:19522690..19522704, -
1.55e-98	FFCP PHASE1:Hg19::chr10:2328652..2328660,+	p@chr10:2328652..2328660, +
1.55e-98	FFCP PHASE2:Hg19::chr12:65466889..65466894,-	p@chr12:65466889..65466894, -
1.55e-98	FFCP PHASE1:Hg19::chr7:97958802..97958804,-	p@chr7:97958802..97958804, -
1.55e-98	FFCP PHASE1:Hg19::chr9:104610923..104610939,-	p@chr9:104610923..104610939, -
1.55e-98	FFCP PHASE1:Hg19::chr8:128415944..128415958,+	p@chr8:128415944..128415958, +
1.55e-98	FFCP PHASE1:Hg19::chr1:163338283..163338286,+	p@chr1:163338283..163338286, +
1.55e-98	FFCP PHASE1:Hg19::chr4:157174324..157174332,+	p@chr4:157174324..157174332, +
1.55e-98	FFCP PHASE1:Hg19::chr13:32790605..32790619,+	p@chr13:32790605..32790619, +
1.55e-98	FFCP PHASE2:Hg19::chr13:110258158..110258170,-	p@chr13:110258158..110258170, -
1.55e-98	FFCP PHASE2:Hg19::chr4:169559850..169559856,-	p@chr4:169559850..169559856, -
1.55e-98	FFCP PHASE2:Hg19::chr6:5491081..5491106,+	p@chr6:5491081..5491106, +
1.55e-98	FFCP PHASE2:Hg19::chr3:24797750..24797759,-	p@chr3:24797750..24797759, -
1.55e-98	FFCP PHASE1:Hg19::chr3:148164872..148164919,-	p@chr3:148164872..148164919, -
1.55e-98	FFCP PHASE2:Hg19::chr4:157174075..157174084,+	p@chr4:157174075..157174084, +
1.55e-98	FFCP PHASE2:Hg19::chr7:87232440..87232448,-	p@chr7:87232440..87232448, -
1.55e-98	FFCP PHASE2:Hg19::chr3:140054665..140054678,-	p@chr3:140054665..140054678, -
1.55e-98	FFCP PHASE2:Hg19::chr2:159306961..159306975,+	p@chr2:159306961..159306975, +
1.55e-98	FFCP PHASE2:Hg19::chr5:57619538..57619575,-	p@chr5:57619538..57619575, -
1.55e-98	FFCP PHASE1:Hg19::chr8:107667666..107667673,+	p@chr8:107667666..107667673, +
1.55e-98	FFCP PHASE1:Hg19::chr13:54830821..54830841,+	p@chr13:54830821..54830841, +
1.55e-98	FFCP PHASE1:Hg19::chr8:128419359..128419367,-	p@chr8:128419359..128419367, -
1.55e-98	FFCP PHASE2:Hg19::chr1:93128346..93128356,-	p@chr1:93128346..93128356, -
1.55e-98	FFCP PHASE1:Hg19::chr7:141499716..141499722,+	p@chr7:141499716..141499722, +
1.55e-98	FFCP PHASE1:Hg19::chr6:104674708..104674749,-	p@chr6:104674708..104674749, -
1.55e-98	FFCP PHASE2:Hg19::chr8:127817393..127817400,+	p@chr8:127817393..127817400, +
1.55e-98	FFCP PHASE2:Hg19::chr21:37143915..37143924,-	p@chr21:37143915..37143924, -

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