CL:0002621

Name:	gingival epithelial cell
Namespace:	cell
Created by:	tmeehan
Creation date:	2011-03-14T12:46:28Z

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0002251(epithelial cell of alimentary canal)
part_of:	UBERON:0001949(gingival epithelium)

Children

derives from:	FF:0000254 (human gingival epithelial cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 11221-116B6 (Gingival epithelial cells, donor1 (GEA11))
• 11302-117B6 (Gingival epithelial cells, donor2 (GEA14))
• 11379-118B2 (Gingival epithelial cells, donor3 (GEA15))

Mouse (Mus musculus)

• 11221-116B6 (Gingival epithelial cells, donor1 (GEA11))
• 11302-117B6 (Gingival epithelial cells, donor2 (GEA14))
• 11379-118B2 (Gingival epithelial cells, donor3 (GEA15))

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002621 (gingival epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
4.06e-99	FFCP PHASE2:Hg19::chr4:143470541..143470551,+	p@chr4:143470541..143470551, +
4.06e-99	FFCP PHASE1:Hg19::chr4:143470541..143470551,+	p@chr4:143470541..143470551, +
1.52e-87	FFCP PHASE2:Hg19::chr17:73753856..73753871,+	p1@CU674593
1.52e-87	FFCP PHASE1:Hg19::chr17:73753856..73753871,+	p1@CU674593
1.52e-87	FFCP PHASE2:Hg19::chr1:14465017..14465026,+	p@chr1:14465017..14465026, +
1.52e-87	FFCP PHASE1:Hg19::chr1:14465017..14465026,+	p@chr1:14465017..14465026, +
2.28e-85	FFCP PHASE2:Hg19::chr8:130798890..130798901,-	p3@GSDMC
2.28e-85	FFCP PHASE1:Hg19::chr8:130798890..130798901,-	p3@GSDMC
5.41e-85	FFCP PHASE2:Hg19::chr11:93754560..93754567,+	p@chr11:93754560..93754567, +
5.41e-85	FFCP PHASE1:Hg19::chr11:93754560..93754567,+	p@chr11:93754560..93754567, +
2.27e-84	FFCP PHASE2:Hg19::chr10:105791095..105791110,-	p@chr10:105791095..105791110, -
2.27e-84	FFCP PHASE1:Hg19::chr10:105791095..105791110,-	p@chr10:105791095..105791110, -
1.01e-74	FFCP PHASE2:Hg19::chr1:153533849..153533860,-	p@chr1:153533849..153533860, -
1.01e-74	FFCP PHASE1:Hg19::chr1:153533849..153533860,-	p@chr1:153533849..153533860, -
1.01e-74	FFCP PHASE2:Hg19::chr7:40883542..40883550,+	p@chr7:40883542..40883550, +
1.01e-74	FFCP PHASE1:Hg19::chr7:40883542..40883550,+	p@chr7:40883542..40883550, +
2.14e-74	FFCP PHASE2:Hg19::chr3:190252374..190252383,-	p@chr3:190252374..190252383, -
2.14e-74	FFCP PHASE1:Hg19::chr3:190252374..190252383,-	p@chr3:190252374..190252383, -
4.55e-74	FFCP PHASE2:Hg19::chr21:44957893..44957903,-	p@chr21:44957893..44957903, -
4.55e-74	FFCP PHASE1:Hg19::chr21:44957893..44957903,-	p@chr21:44957893..44957903, -
9.64e-74	FFCP PHASE1:Hg19::chr10:106205489..106205498,+	p@chr10:106205489..106205498, +
9.64e-74	FFCP PHASE2:Hg19::chr10:106205489..106205498,+	p@chr10:106205489..106205498, +
3.35e-66	FFCP PHASE2:Hg19::chr15:40531729..40531738,+	p15@PAK6
3.35e-66	FFCP PHASE1:Hg19::chr15:40531729..40531738,+	p15@PAK6
4.71e-66	FFCP PHASE2:Hg19::chr16:82671490..82671521,+	p@chr16:82671490..82671521, +
4.71e-66	FFCP PHASE1:Hg19::chr16:82671490..82671521,+	p@chr16:82671490..82671521, +
6.53e-66	FFCP PHASE2:Hg19::chr9:108870138..108870152,+	p1@uc004bcw.2
6.53e-66	FFCP PHASE1:Hg19::chr9:108870138..108870152,+	p1@uc004bcw.2
1.22e-59	FFCP PHASE2:Hg19::chr11:13030878..13030889,+	p2@RASSF10
1.22e-59	FFCP PHASE1:Hg19::chr11:13030878..13030889,+	p2@RASSF10
1.83e-59	FFCP PHASE2:Hg19::chr18:20493879..20493891,+	p@chr18:20493879..20493891, +
1.83e-59	FFCP PHASE1:Hg19::chr18:20493879..20493891,+	p@chr18:20493879..20493891, +
2.73e-59	FFCP PHASE2:Hg19::chr8:124850358..124850380,+	p@chr8:124850358..124850380, +
2.73e-59	FFCP PHASE1:Hg19::chr8:124850358..124850380,+	p@chr8:124850358..124850380, +
8.69e-55	FFCP PHASE2:Hg19::chr13:30259768..30259777,+	p@chr13:30259768..30259777, +
8.69e-55	FFCP PHASE1:Hg19::chr13:30259768..30259777,+	p@chr13:30259768..30259777, +
1.81e-54	FFCP PHASE2:Hg19::chr5:167247119..167247129,+	p@chr5:167247119..167247129, +
1.81e-54	FFCP PHASE1:Hg19::chr5:167247119..167247129,+	p@chr5:167247119..167247129, +
2.17e-54	FFCP PHASE2:Hg19::chr13:75017232..75017235,+	p@chr13:75017232..75017235, +
2.17e-54	FFCP PHASE2:Hg19::chr5:52619638..52619641,+	p@chr5:52619638..52619641, +
2.17e-54	FFCP PHASE1:Hg19::chr5:52619638..52619641,+	p@chr5:52619638..52619641, +
2.17e-54	FFCP PHASE1:Hg19::chr13:75017232..75017235,+	p@chr13:75017232..75017235, +
5.41e-54	FFCP PHASE1:Hg19::chr11:129511955..129511961,-	p@chr11:129511955..129511961, -
5.41e-54	FFCP PHASE2:Hg19::chr11:129511955..129511961,-	p@chr11:129511955..129511961, -
2.87e-53	FFCP PHASE2:Hg19::chr1:183213228..183213235,+	p@chr1:183213228..183213235, +
2.87e-53	FFCP PHASE1:Hg19::chr1:183213228..183213235,+	p@chr1:183213228..183213235, +
2.87e-53	FFCP PHASE2:Hg19::chr3:52440350..52440361,-	p@chr3:52440350..52440361, -
2.87e-53	FFCP PHASE1:Hg19::chr3:52440350..52440361,-	p@chr3:52440350..52440361, -
4.89e-53	FFCP PHASE1:Hg19::chr8:130798565..130798567,-	p4@GSDMC
4.89e-53	FFCP PHASE2:Hg19::chr10:5567644..5567657,+	p@chr10:5567644..5567657, +
4.89e-53	FFCP PHASE1:Hg19::chr10:5567644..5567657,+	p@chr10:5567644..5567657, +
4.89e-53	FFCP PHASE2:Hg19::chr8:130798565..130798567,-	p4@GSDMC
6.39e-53	FFCP PHASE2:Hg19::chr10:106205503..106205518,+	p@chr10:106205503..106205518, +
6.39e-53	FFCP PHASE1:Hg19::chr17:73720330..73720338,+	p22@ITGB4
6.39e-53	FFCP PHASE1:Hg19::chr10:106205503..106205518,+	p@chr10:106205503..106205518, +
6.39e-53	FFCP PHASE2:Hg19::chr17:73720330..73720338,+	p22@ITGB4
6.12e-50	FFCP PHASE2:Hg19::chr19:10665857..10665900,-	p@chr19:10665857..10665900, -
6.12e-50	FFCP PHASE1:Hg19::chr19:10665857..10665900,-	p@chr19:10665857..10665900, -
7.24e-50	FFCP PHASE1:Hg19::chr11:392625..392628,+	p13@PKP3
7.24e-50	FFCP PHASE2:Hg19::chr11:392625..392628,+	p13@PKP3
5.68e-46	FFCP PHASE2:Hg19::chr12:116955659..116955671,+	p1@ENST00000552992
5.68e-46	FFCP PHASE2:Hg19::chr2:231649545..231649550,-	p@chr2:231649545..231649550, -
5.68e-46	FFCP PHASE1:Hg19::chr12:116955659..116955671,+	p1@ENST00000552992
5.68e-46	FFCP PHASE1:Hg19::chr2:231649545..231649550,-	p@chr2:231649545..231649550, -
6.94e-44	FFCP PHASE2:Hg19::chr11:13073062..13073067,+	p@chr11:13073062..13073067, +
6.94e-44	FFCP PHASE1:Hg19::chr11:13073062..13073067,+	p@chr11:13073062..13073067, +
9.28e-44	FFCP PHASE2:Hg19::chr6:29643393..29643442,-	p@chr6:29643393..29643442, -
9.28e-44	FFCP PHASE1:Hg19::chr6:29643393..29643442,-	p@chr6:29643393..29643442, -
1.43e-43	FFCP PHASE2:Hg19::chr8:105212349..105212367,+	p@chr8:105212349..105212367, +
1.43e-43	FFCP PHASE1:Hg19::chr8:105212349..105212367,+	p@chr8:105212349..105212367, +
1.92e-43	FFCP PHASE1:Hg19::chr11:93754316..93754353,+	p2@HEPHL1
1.92e-43	FFCP PHASE2:Hg19::chr11:93754316..93754353,+	p2@HEPHL1
2.21e-43	FFCP PHASE2:Hg19::chr21:44957855..44957891,-	p@chr21:44957855..44957891, -
2.21e-43	FFCP PHASE1:Hg19::chr21:44957855..44957891,-	p@chr21:44957855..44957891, -
4.55e-43	FFCP PHASE2:Hg19::chr9:34662651..34662656,-	p1@CCL27
4.55e-43	FFCP PHASE1:Hg19::chr9:34662651..34662656,-	p1@CCL27
4.55e-43	FFCP PHASE2:Hg19::chr2:43768420..43768427,-	p5@THADA
4.55e-43	FFCP PHASE1:Hg19::chr2:43768420..43768427,-	p5@THADA
6.07e-43	FFCP PHASE1:Hg19::chr18:9617195..9617198,-	p@chr18:9617195..9617198, -
6.07e-43	FFCP PHASE2:Hg19::chr18:9617195..9617198,-	p@chr18:9617195..9617198, -
1.91e-42	FFCP PHASE2:Hg19::chr1:153534027..153534037,+	p@chr1:153534027..153534037, +
1.91e-42	FFCP PHASE1:Hg19::chr1:153534027..153534037,+	p@chr1:153534027..153534037, +
5.06e-41	FFCP PHASE2:Hg19::chr7:40883521..40883532,+	p@chr7:40883521..40883532, +
5.06e-41	FFCP PHASE1:Hg19::chr7:40883521..40883532,+	p@chr7:40883521..40883532, +
6.64e-41	FFCP PHASE2:Hg19::chr3:149510368..149510386,-	p5@ANKUB1
6.64e-41	FFCP PHASE1:Hg19::chr3:149510368..149510386,-	p5@ANKUB1
1.96e-40	FFCP PHASE2:Hg19::chr1:183213300..183213316,+	p@chr1:183213300..183213316, +
1.96e-40	FFCP PHASE1:Hg19::chr1:183213300..183213316,+	p@chr1:183213300..183213316, +
2.93e-40	FFCP PHASE2:Hg19::chr5:52552639..52552656,-	p@chr5:52552639..52552656, -
2.93e-40	FFCP PHASE1:Hg19::chr5:52552639..52552656,-	p@chr5:52552639..52552656, -
4.38e-40	FFCP PHASE2:Hg19::chr4:15920326..15920338,+	p@chr4:15920326..15920338, +
4.38e-40	FFCP PHASE1:Hg19::chrX:19692351..19692356,-	p@chrX:19692351..19692356, -
4.38e-40	FFCP PHASE2:Hg19::chrX:19692351..19692356,-	p@chrX:19692351..19692356, -
4.38e-40	FFCP PHASE1:Hg19::chr4:15920326..15920338,+	p@chr4:15920326..15920338, +
1.23e-38	FFCP PHASE1:Hg19::chr2:69026957..69026966,+	p@chr2:69026957..69026966, +
1.23e-38	FFCP PHASE2:Hg19::chr2:69026957..69026966,+	p@chr2:69026957..69026966, +
2.18e-38	FFCP PHASE2:Hg19::chr7:56051493..56051514,+	p@chr7:56051493..56051514, +
2.18e-38	FFCP PHASE1:Hg19::chr7:56051493..56051514,+	p@chr7:56051493..56051514, +
2.64e-38	FFCP PHASE2:Hg19::chr7:41277861..41277905,+	p@chr7:41277861..41277905, +
2.64e-38	FFCP PHASE1:Hg19::chr7:41277861..41277905,+	p@chr7:41277861..41277905, +

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