Personal tools

MacroAPE 1083:Motif29

From FANTOM5_SSTAR

Revision as of 13:01, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: motif29

Motif matrix
POACGT
0148782438245834949
0200368480
0347772172074422909
0400036848
0500368480
0600036848
0700368480
0800368480

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

MET28#MA0332.1-22.22043e-050.01056920.02111086GGCTGTGGCTGTGG+
RUNX1#MA0002.200.0001838250.08750050.0873868GGCTGTGGGTCTGTGGTTT+
MET31#MA0333.1-10.000687340.3271740.187227GGCTGTGGGGTGTGGCG+
MET4#MA0335.100.0009663720.4599930.187228GGCTGTGGAACTGTGG+
Klf4#MA0039.210.0009845850.4686620.187228GGCTGTGGTGGGTGGGGC+
AFT2#MA0270.110.004031761.919120.6388697GGCTGTGGGGGGTGTG-
MET32#MA0334.1-30.005946822.830690.8077095GGCTGTGGTGTGGCG-
BAS1#MA0278.1130.01120755.334750.9986918GGCTGTGGTTGACTTGACTCTGGCTGTGC-
Myb#MA0100.100.01259045.993050.9986918GGCTGTGGGGCCGTTG+
YGR067C#MA0425.130.01517187.221760.9986918GGCTGTGGTGAAAAAGTGGGGT-
CRZ1#MA0285.120.01578037.511440.9986917GGCTGTGGGTGGCTTAG-
RUNX1#MA0002.200.01598477.608710.9986918GGCTGTGGTATTGTGGTTA+
RREB1#MA0073.110.01662777.914790.9986918GGCTGTGGTGGGGGGGGGTGGTTTGGGG-