FFCP PHASE1:Hg19::chr16:2246560..2246614,-
From FANTOM5_SSTAR
| Short description: | p1@CASKIN1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_CASKIN1_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | -35bp_to_ENST00000343516_5end |
| EntrezGene: | CASKIN1 |
| HGNC: | 20879 |
| UniProt: | Q8WXD9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@CASKIN1 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 4.69e-84 | 56 |
| neural rod | 4.69e-84 | 56 |
| future spinal cord | 4.69e-84 | 56 |
| neural keel | 4.69e-84 | 56 |
| regional part of nervous system | 6.02e-78 | 53 |
| regional part of brain | 6.02e-78 | 53 |
| central nervous system | 1.13e-74 | 81 |
| nervous system | 1.69e-73 | 89 |
| brain | 5.45e-72 | 68 |
| future brain | 5.45e-72 | 68 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
