NonredundantMotifs:25

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known25
• db :HOCOMOCO
• Id :TGIF1_si
• name  :
• score :0.2503789537870696
  
• External refs:

EntrezGene:7050
UniProt:7050

• Internal refs:

EntrezGene:7050

Motif matrix
P0 A C G T 1 3.2080645161290273 4.1951612903225675 4.304838709677403 4.304838709677403 2 0.0 0.0 0.0 16.0129032258064 3 0.0 1.0967741935483835 14.91612903225801 0.0 4 16.0129032258064 0.0 0.0 0.0 5 0.0 16.0129032258064 0.0 0.0 6 16.0129032258064 0.0 0.0 0.0 7 3.2080645161290273 2.220967741935472 9.34999999999997 1.2338709677419308