NonredundantMotifs:28

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known28
• db :SWISSREGULON
• Id :DMAP1_NCOR(1,2)_SMARC.p2
• name  :
• score :0.2074314320749557
  
• External refs:

• Internal refs:

Motif matrix
PO A C G T 1 66.182994 8.551344 2.003484 282.864563999999 2 50.118493 1.767241 170.113212 137.60344 3 93.8878240000001 1.982836 79.616861 184.114865 4 0.561712 296.779055 0.731482 61.530137 5 155.456632 19.389437 177.790795 6.965522 6 1.257013 35.383744 317.793158999999 5.16847 7 0.445108 0 0 359.157278 8 0 0 0 359.602386