NonredundantMotifs:106

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known106
• db :UNIPROBE
• Id :E2F2_secondary
• name :SCI09
• score :1.8769964180688634
  
• External refs:

EntrezGene:1870
UniProt:1870

• Internal refs:

EntrezGene:1870

Motif matrix

P0 A C G T 1 0.2704401466472 0.280854563996597 0.182253932648463 0.26645135670774 2 0.232293824553287 0.286576741921589 0.287021989443211 0.194107444081914 3 0.182718648811551 0.289523645691666 0.187726474522759 0.340031230974024 4 0.32166754059233 0.055383382227865 0.129604184540657 0.493344892639148 5 0.10597094035225 0.476988758749163 0.00758013285624535 0.409460168042342 6 0.150172027245697 0.0137013551586514 0.803513011961375 0.0326136056342759 7 0.00455868116379531 0.194378164390001 0.794740729905578 0.00632242454062528 8 0.0478433508373583 0.942269228692923 0.00591760599925775 0.00396981447046127 9 0.0100887630152823 0.00258398875110373 0.946109395733224 0.0412178525003898 10 0.0122764128374067 0.865373489580184 0.117935353488399 0.00441474409401017 11 0.0459118414331594 0.779219643705453 0.00693541655777782 0.16793309830361 12 0.781965072328259 0.0116227134053222 0.113119353501702 0.0932928607647172 13 0.612968274487541 0.172164479748871 0.0960610539237365 0.118806191839851 14 0.357204303460633 0.206996637451201 0.222456402337992 0.213342656750174 15 0.292059187528468 0.261101052111441 0.279673741850398 0.167166018509692 16 0.164667144585506 0.173227022291254 0.371882348834686 0.290223484288554 17 0.157764910641177 0.278892432486016 0.333118716726286 0.230223940146521