NonredundantMotifs:125

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known125
• db :UNIPROBE
• Id :Osr1_secondary
• name :SCI09
• score :0.03785698183985985
  
• External refs:

EntrezGene:130497
UniProt:130497

• Internal refs:

EntrezGene:130497

Motif matrix

P0 A C G T 1 0.454194304555283 0.0926763518899079 0.30632619139738 0.146803152157429 2 0.183010716498827 0.349823482489622 0.148031258788473 0.319134542223078 3 0.402809422283432 0.216432822776033 0.154083378339873 0.226674376600662 4 0.211744857574739 0.252048888259386 0.161182320792434 0.375023933373441 5 0.136344555336227 0.0836895552992941 0.743914245071156 0.0360516442933227 6 0.026957376959848 0.909548628289233 0.0245450439318233 0.0389489508190957 7 0.0290797895171459 0.0820997177408951 0.0325738009191948 0.856246691822764 8 0.787454478586303 0.0482018628212394 0.0524858416189365 0.111857816973521 9 0.0734608923621929 0.881277971792695 0.0223131340273003 0.0229480018178121 10 0.0267906902775263 0.545542386470539 0.0108154186008131 0.416851504651121 11 0.322008063620382 0.10156514180796 0.0264891081317768 0.549937686439881 12 0.458267490951874 0.105780810844209 0.425231271008236 0.0107204271956807 13 0.432794010397369 0.314870360762378 0.0906850017228712 0.161650627117381 14 0.260978284459642 0.176097037348364 0.204310496587905 0.358614181604089 15 0.28287710971685 0.259359368942012 0.208880730294336 0.248882791046803 16 0.274196503978092 0.291830703264195 0.231013322506392 0.202959470251321