NonredundantMotifs:165

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant165
• db :HOCOMOCO
• Id :ATF5_si
• name  :
• score :0.0902609800519367
  
• External refs:

EntrezGene:22809
UniProt:22809

• Internal refs:

EntrezGene:22809

Motif matrix

P0 A C G T 1 8.03360655737706 1.9745901639344263 3.164754098360656 19.827049180327883 2 29.213114754098353 0.865573770491803 0.9737704918032796 1.9475409836065556 3 30.18688524590165 0.0 0.0 2.8131147540983616 4 0.0 0.0 31.052459016393442 1.9475409836065556 5 0.9737704918032796 0.0 32.02622950819671 0.0 6 16.662295081967205 0.865573770491803 12.659016393442618 2.8131147540983616 7 28.131147540983587 0.9737704918032796 0.9737704918032796 2.921311475409835 8 0.865573770491803 0.865573770491803 31.268852459016383 0.0 9 33.0 0.0 0.0 0.0 10 14.390163934426235 3.8950819672131183 13.740983606557384 0.9737704918032796 11 6.70819672131147 0.9737704918032796 20.449180327868856 4.868852459016382 12 5.382786885245912 4.4090163934426165 14.146721311475412 9.061475409836058