NonredundantMotifs:182

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant182
• db :UNIPROBE
• Id :Arid3a_secondary
• name :SCI09
• score :0.008032957655459234
  
• External refs:

EntrezGene:1820
UniProt:1820

• Internal refs:

EntrezGene:1820

Motif matrix

P0 A C G T 1 0.30802013052853 0.276346695589237 0.16161489197682 0.254018281905412 2 0.248645896712315 0.301261009156109 0.219933721497643 0.230159372633933 3 0.256412373138997 0.342954374494595 0.245071590563516 0.155561661802892 4 0.272754308450474 0.338198331260163 0.328555831533347 0.0604915287560159 5 0.373995137583118 0.152483679932365 0.388887872497568 0.0846333099869495 6 0.0729155655707379 0.189056143829106 0.158989545287081 0.579038745313075 7 0.811964115145407 0.0714472849350039 0.101263070316244 0.0153255296033448 8 0.0408879169317603 0.172828629141079 0.100770504638393 0.685512949288768 9 0.178536147311814 0.579507568596531 0.209022606561806 0.0329336775298486 10 0.502337695245645 0.0738256349319392 0.252642753251326 0.171193916571089 11 0.348504451665774 0.0970299857931285 0.274747071074513 0.279718491466585 12 0.43786681678324 0.210964349063345 0.247804267356841 0.103364566796574 13 0.248428905118418 0.0886398987658005 0.177088044413908 0.485843151701874 14 0.215644927632108 0.320917089203096 0.122075521995294 0.341362461169501 15 0.198294588247106 0.0999661655520096 0.334816990498121 0.366922255702764