NonredundantMotifs:101

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant101
• db :UNIPROBE
• Id :Cphx_3484.1
• name :CELL08
• score :0.06620958371606205
  
• External refs:

EntrezGene:502042
UniProt:502042

• Internal refs:

EntrezGene:502042

Motif matrix

P0 A C G T 1 0.337348763931314 0.184522380190307 0.262763023816345 0.215365832062034 2 0.0307045589135245 0.00498477891086687 0.00485925792365284 0.959451404251956 3 0.0392084187728609 0.0161169589973361 0.932630043250018 0.0120445789797855 4 0.975773367905234 0.00665679387059839 0.00652405844011646 0.0110457797840511 5 0.0357412803981999 0.00406052770265754 0.0567257862875699 0.903472405611573 6 0.0995237853269365 0.371013880789135 0.287587668055301 0.241874665828627 7 0.219255204328639 0.280760646934647 0.34893745448659 0.151046694250123 8 0.537665593588842 0.343744008792147 0.0790097923855718 0.0395806052334391 9 0.954765462309922 0.0267057777792129 0.00699511500673706 0.0115336449041277 10 0.00684249913400434 0.00511610254740389 0.00278032130374862 0.985261077014843 11 0.00404334800563113 0.971830472839378 0.00306225988934399 0.0210639192656466 12 0.947882429181939 0.0141921962457856 0.00786494602712621 0.0300604285451496 13 0.610545454704323 0.140112698063264 0.148523081693134 0.10081876553928 14 0.356890543286946 0.207960824082546 0.104885321568421 0.330263311062087