CL:0000840
From FANTOM5_SSTAR
| Name: | immature conventional dendritic cell |
|---|---|
| Namespace: | cell;;efo |
| Definition: | "An immature cell of the conventional dendritic cell lineage, characterized by high levels of antigen uptake via endocytosis, macropinocytosis, and phagocytosis, and typically found resident in the tissues. Markers for this cell are CD80-low, CD86-low, and MHC-II-low." [GOC:add, GOC:tfm, PMID:9521319] |
| Synonyms: | "immature myeloid dendritic cell" NARROW [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000766(myeloid leukocyte),CL:0000990(conventional dendritic cell) |
|---|---|
| develops_from: | CL:0001029(common dendritic progenitor) |
Children
| is a: | CL:0001016 (immature CD1a-positive Langerhans cell) |
|---|---|
| derives from: | FF:0000044 (human monocyte immature derived dendritic cell sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11227-116C3 (Dendritic Cells - monocyte immature derived, donor1)
- 11228-116C4 (Dendritic Cells - plasmacytoid, donor1)
- 11308-117C3 (Dendritic Cells - monocyte immature derived, donor2)
- 11384-118B7 (Dendritic Cells - monocyte immature derived, donor3)
- 11904-125F5 (immature langerhans cells, donor1)
- 11905-125F6 (immature langerhans cells, donor2)
Mouse (Mus musculus)
- 11227-116C3 (Dendritic Cells - monocyte immature derived, donor1)
- 11228-116C4 (Dendritic Cells - plasmacytoid, donor1)
- 11308-117C3 (Dendritic Cells - monocyte immature derived, donor2)
- 11384-118B7 (Dendritic Cells - monocyte immature derived, donor3)
- 11904-125F5 (immature langerhans cells, donor1)
- 11905-125F6 (immature langerhans cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000840 (immature conventional dendritic cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.64e-136 | FFCP PHASE2:Hg19::chr1:159272441..159272452,+#_931403614a9d239dc8a0da0a03725af0 | p5@FCER1A |
| 2.64e-136 | FFCP PHASE1:Hg19::chr1:159272441..159272452,+#_931403614a9d239dc8a0da0a03725af0 | p5@FCER1A |
| 3.49e-136 | FFCP PHASE2:Hg19::chr1:159272420..159272431,+#_593ebf643c3c73524329de2cfb25e987 | p3@FCER1A |
| 3.49e-136 | FFCP PHASE1:Hg19::chr1:159272420..159272431,+#_593ebf643c3c73524329de2cfb25e987 | p3@FCER1A |
| 4.61e-136 | FFCP PHASE1:Hg19::chr2:61080954..61080964,+#_e2bf9d4b28d10fd73c7a1f5086a9e4b5 | p@chr2:61080954..61080964, + |
| 4.61e-136 | FFCP PHASE2:Hg19::chr2:61080954..61080964,+#_e2bf9d4b28d10fd73c7a1f5086a9e4b5 | p@chr2:61080954..61080964, + |
| 1.07e-130 | FFCP PHASE2:Hg19::chr4:16267477..16267486,-#_cbdc55a3086352bdf55258ecae4b96e7 | p@chr4:16267477..16267486, - |
| 1.07e-130 | FFCP PHASE1:Hg19::chr4:16267477..16267486,-#_cbdc55a3086352bdf55258ecae4b96e7 | p@chr4:16267477..16267486, - |
| 1.07e-130 | FFCP PHASE1:Hg19::chr17:6982145..6982156,-#_cbdc55a3086352bdf55258ecae4b96e7 | p1@CU691636 |
| 1.07e-130 | FFCP PHASE2:Hg19::chr17:6982145..6982156,-#_cbdc55a3086352bdf55258ecae4b96e7 | p1@CU691636 |
| 3.08e-117 | FFCP PHASE2:Hg19::chr1:158224278..158224289,+#_50a585c090ad6fd4d7be035c7ad012f5 | p9@CD1A |
| 3.08e-117 | FFCP PHASE1:Hg19::chr1:158224278..158224289,+#_50a585c090ad6fd4d7be035c7ad012f5 | p9@CD1A |
| 6.33e-117 | FFCP PHASE1:Hg19::chr9:124030015..124030022,+#_21385c76ecc32c038902b58f98cd2ec0 | p43@GSN |
| 6.33e-117 | FFCP PHASE2:Hg19::chr9:124030015..124030022,+#_21385c76ecc32c038902b58f98cd2ec0 | p43@GSN |
| 6.76e-105 | FFCP PHASE1:Hg19::chr17:6983503..6983512,-#_edd16b8ccb168290f35ecb1c32b10a13 | p5@CLEC10A |
| 6.76e-105 | FFCP PHASE2:Hg19::chr17:6983503..6983512,-#_edd16b8ccb168290f35ecb1c32b10a13 | p5@CLEC10A |
| 1.51e-104 | FFCP PHASE2:Hg19::chr12:121976278..121976285,-#_45142518047a6acd5664f83a27fa5509 | p@chr12:121976278..121976285, - |
| 1.51e-104 | FFCP PHASE1:Hg19::chr12:121976278..121976285,-#_45142518047a6acd5664f83a27fa5509 | p@chr12:121976278..121976285, - |
| 6.22e-103 | FFCP PHASE2:Hg19::chr1:158224235..158224244,+#_420eb3608e013c60307e18d7c23842da | p10@CD1A |
| 6.22e-103 | FFCP PHASE1:Hg19::chr1:158224235..158224244,+#_420eb3608e013c60307e18d7c23842da | p10@CD1A |
| 9.47e-103 | FFCP PHASE1:Hg19::chr17:6983479..6983490,-#_ac0f7a23411634ffd4b3e07d11d2c161 | p4@CLEC10A |
| 9.47e-103 | FFCP PHASE2:Hg19::chr17:6983479..6983490,-#_ac0f7a23411634ffd4b3e07d11d2c161 | p4@CLEC10A |
| 4.11e-102 | FFCP PHASE2:Hg19::chr15:101535004..101535045,+#_92678a14e4537d9c4054cd11267f5641 | p@chr15:101535004..101535045, + |
| 4.11e-102 | FFCP PHASE1:Hg19::chr15:101535004..101535045,+#_92678a14e4537d9c4054cd11267f5641 | p@chr15:101535004..101535045, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr8:20258347..20258360,+#_433ffed6aaf030609cbb815c90826d62 | p@chr8:20258347..20258360, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:169633317..169633344,+#_433ffed6aaf030609cbb815c90826d62 | p43@PALLD |
| 1.83e-98 | FFCP PHASE1:Hg19::chr6:154521063..154521071,-#_433ffed6aaf030609cbb815c90826d62 | p@chr6:154521063..154521071, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:8171916..8171922,+#_433ffed6aaf030609cbb815c90826d62 | p4@PFAS |
| 1.83e-98 | FFCP PHASE2:Hg19::chr2:218933972..218933980,+#_433ffed6aaf030609cbb815c90826d62 | p1@RUFY4 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr11:7544914..7544928,+#_433ffed6aaf030609cbb815c90826d62 | p@chr11:7544914..7544928, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:46058452..46058468,+#_433ffed6aaf030609cbb815c90826d62 | p@chr17:46058452..46058468, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr11:1870376..1870388,-#_433ffed6aaf030609cbb815c90826d62 | p@chr11:1870376..1870388, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr5:86707848..86707855,-#_433ffed6aaf030609cbb815c90826d62 | p@chr5:86707848..86707855, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:6982162..6982170,-#_433ffed6aaf030609cbb815c90826d62 | p2@CU691636 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:8171916..8171922,+#_433ffed6aaf030609cbb815c90826d62 | p4@PFAS |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:15229663..15229673,+#_433ffed6aaf030609cbb815c90826d62 | p@chr20:15229663..15229673, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:26970937..26970956,-#_433ffed6aaf030609cbb815c90826d62 | p2@KIAA0100 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:153744224..153744233,+#_433ffed6aaf030609cbb815c90826d62 | p@chr1:153744224..153744233, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:1725865..1725884,+#_433ffed6aaf030609cbb815c90826d62 | p7@WNT5B |
| 1.83e-98 | FFCP PHASE2:Hg19::chr10:46048740..46048751,-#_433ffed6aaf030609cbb815c90826d62 | p@chr10:46048740..46048751, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr8:17777952..17777982,-#_433ffed6aaf030609cbb815c90826d62 | p@chr8:17777952..17777982, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:6982162..6982170,-#_433ffed6aaf030609cbb815c90826d62 | p2@CU691636 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr10:127738525..127738534,-#_433ffed6aaf030609cbb815c90826d62 | p@chr10:127738525..127738534, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr10:119014661..119014665,+#_433ffed6aaf030609cbb815c90826d62 | p@chr10:119014661..119014665, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr6:42145678..42145695,+#_433ffed6aaf030609cbb815c90826d62 | p@chr6:42145678..42145695, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr16:57399108..57399115,+#_433ffed6aaf030609cbb815c90826d62 | p@chr16:57399108..57399115, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr6:32156759..32156767,+#_433ffed6aaf030609cbb815c90826d62 | p@chr6:32156759..32156767, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:26970937..26970956,-#_433ffed6aaf030609cbb815c90826d62 | p2@KIAA0100 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr19:17843005..17843009,+#_433ffed6aaf030609cbb815c90826d62 | p@chr19:17843005..17843009, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr11:1870362..1870366,-#_433ffed6aaf030609cbb815c90826d62 | p@chr11:1870362..1870366, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr8:97906247..97906259,+#_433ffed6aaf030609cbb815c90826d62 | p@chr8:97906247..97906259, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:91005462..91005483,+#_433ffed6aaf030609cbb815c90826d62 | p@chr4:91005462..91005483, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr2:218954217..218954224,+#_433ffed6aaf030609cbb815c90826d62 | p@chr2:218954217..218954224, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr11:7544941..7544949,+#_433ffed6aaf030609cbb815c90826d62 | p@chr11:7544941..7544949, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr2:218933972..218933980,+#_433ffed6aaf030609cbb815c90826d62 | p1@RUFY4 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr16:5070595..5070602,-#_433ffed6aaf030609cbb815c90826d62 | p@chr16:5070595..5070602, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:169633317..169633344,+#_433ffed6aaf030609cbb815c90826d62 | p43@PALLD |
| 1.83e-98 | FFCP PHASE2:Hg19::chr10:119014647..119014658,+#_433ffed6aaf030609cbb815c90826d62 | p@chr10:119014647..119014658, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr8:97906247..97906259,+#_433ffed6aaf030609cbb815c90826d62 | p@chr8:97906247..97906259, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:78105380..78105389,+#_433ffed6aaf030609cbb815c90826d62 | p@chr4:78105380..78105389, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:26970962..26970974,-#_433ffed6aaf030609cbb815c90826d62 | p5@KIAA0100 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr10:127738495..127738498,-#_433ffed6aaf030609cbb815c90826d62 | p@chr10:127738495..127738498, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr5:86707848..86707855,-#_433ffed6aaf030609cbb815c90826d62 | p@chr5:86707848..86707855, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:46058415..46058422,+#_433ffed6aaf030609cbb815c90826d62 | p@chr17:46058415..46058422, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:15229663..15229673,+#_433ffed6aaf030609cbb815c90826d62 | p@chr20:15229663..15229673, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr19:10246051..10246052,+#_433ffed6aaf030609cbb815c90826d62 | p@chr19:10246051..10246052, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:153744224..153744233,+#_433ffed6aaf030609cbb815c90826d62 | p@chr1:153744224..153744233, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr10:127738551..127738554,-#_433ffed6aaf030609cbb815c90826d62 | p@chr10:127738551..127738554, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr5:52909608..52909635,+#_433ffed6aaf030609cbb815c90826d62 | p@chr5:52909608..52909635, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr6:42145703..42145716,+#_433ffed6aaf030609cbb815c90826d62 | p@chr6:42145703..42145716, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:46058415..46058422,+#_433ffed6aaf030609cbb815c90826d62 | p@chr17:46058415..46058422, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr6:42145678..42145695,+#_433ffed6aaf030609cbb815c90826d62 | p@chr6:42145678..42145695, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:26970962..26970974,-#_433ffed6aaf030609cbb815c90826d62 | p5@KIAA0100 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:8278143..8278154,+#_433ffed6aaf030609cbb815c90826d62 | p@chr12:8278143..8278154, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:224398082..224398104,-#_433ffed6aaf030609cbb815c90826d62 | p2@ENST00000453760 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr14:55590616..55590617,+#_433ffed6aaf030609cbb815c90826d62 | p33@LGALS3 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr11:1870376..1870388,-#_433ffed6aaf030609cbb815c90826d62 | p@chr11:1870376..1870388, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr6:32156759..32156767,+#_433ffed6aaf030609cbb815c90826d62 | p@chr6:32156759..32156767, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr9:131235669..131235680,+#_433ffed6aaf030609cbb815c90826d62 | p@chr9:131235669..131235680, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr11:7544914..7544928,+#_433ffed6aaf030609cbb815c90826d62 | p@chr11:7544914..7544928, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr2:218954217..218954224,+#_433ffed6aaf030609cbb815c90826d62 | p@chr2:218954217..218954224, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr10:119014661..119014665,+#_433ffed6aaf030609cbb815c90826d62 | p@chr10:119014661..119014665, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr3:152588255..152588266,+#_433ffed6aaf030609cbb815c90826d62 | p@chr3:152588255..152588266, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:8278143..8278154,+#_433ffed6aaf030609cbb815c90826d62 | p@chr12:8278143..8278154, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:78105380..78105389,+#_433ffed6aaf030609cbb815c90826d62 | p@chr4:78105380..78105389, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:46058427..46058445,+#_433ffed6aaf030609cbb815c90826d62 | p@chr17:46058427..46058445, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr14:91019196..91019216,-#_433ffed6aaf030609cbb815c90826d62 | p@chr14:91019196..91019216, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr8:20258288..20258300,+#_433ffed6aaf030609cbb815c90826d62 | p@chr8:20258288..20258300, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr14:55590616..55590617,+#_433ffed6aaf030609cbb815c90826d62 | p33@LGALS3 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:46058427..46058445,+#_433ffed6aaf030609cbb815c90826d62 | p@chr17:46058427..46058445, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr5:52909608..52909635,+#_433ffed6aaf030609cbb815c90826d62 | p@chr5:52909608..52909635, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr6:42145703..42145716,+#_433ffed6aaf030609cbb815c90826d62 | p@chr6:42145703..42145716, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr19:10246051..10246052,+#_433ffed6aaf030609cbb815c90826d62 | p@chr19:10246051..10246052, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:224398082..224398104,-#_433ffed6aaf030609cbb815c90826d62 | p2@ENST00000453760 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr9:131235697..131235702,+#_433ffed6aaf030609cbb815c90826d62 | p@chr9:131235697..131235702, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr16:57399108..57399115,+#_433ffed6aaf030609cbb815c90826d62 | p@chr16:57399108..57399115, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr14:91019196..91019216,-#_433ffed6aaf030609cbb815c90826d62 | p@chr14:91019196..91019216, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr11:7544941..7544949,+#_433ffed6aaf030609cbb815c90826d62 | p@chr11:7544941..7544949, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr9:131235669..131235680,+#_433ffed6aaf030609cbb815c90826d62 | p@chr9:131235669..131235680, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr10:127738495..127738498,-#_433ffed6aaf030609cbb815c90826d62 | p@chr10:127738495..127738498, - |
