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UBERON:0001905

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Name:pineal body
Definition:"The pineal body is an unpaired glandular organ subdivision shaped somewhat like a pine cone. It is attached on the midline near the posterior and habenular commissures of the epithalamus." [FMA:62033, Wikipedia:Pineal_gland]
Xrefs:
links:

AAO:0010549
ABA:PIN
BM:P
BTO:0001067
EFO:0000865
EHDAA2:0001466
EHDAA:7523
EMAPA:18778
EV:0100131
EV:0100221
FMA:62033
GAID:453
galen:PinealGland
[1]
[2]
MA:0000175
MAT:0000448
MESH:A.06.407.635
ncithesaurus:Pineal_Gland
NIF_GrossAnatomy:birnlex_1184
NIF_GrossAnatomy:nlx_anat_1010009
OpenCyc:Mx4rv2FMGpwpEbGdrcN5Y29ycA
SCTID:181126002
TAO:0000019
VHOG:0000051
XAO:0000160

ZFA:0000019
Synonyms: "corpus pineale" EXACT []
"epiphysis" RELATED [ZFA:0000019]
"epiphysis cerebri" RELATED [Wikipedia:Epiphysis_cerebri]
"glandula pinealis" EXACT [FMA:TA]
"glandula pinealis" EXACT [FMA:62033, FMA:TA]
"pineal gland" EXACT [FMA:62033]
"pineal organ" EXACT [ZFA:0000019]
Comments:AO notes: part of midbrain in HOG, but this is inconsistent with ABA.
Alt_id: UBERON:FMA_62033-MA_0000175-XAO_0000160
Subset: organ_slim
uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0002757(regional part of epithalamus),UBERON:0003296(gland of diencephalon),UBERON:0010134(secretory circumventricular organ)
part_of:UBERON:0015238(pineal complex)



Children

derives from:FF:0010160 (human pineal gland - adult sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001905 (pineal body), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data











Property "Property value" (as page type) with input value "UBPROP:0000001 "A circumscribed swelling, includes the pineal primordium that appears late in the segmentation period in the dorsal midline of the diencephalon. Kimmel et al, 1995.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical structure which is a medial outgrowth of the thalamus on the dorsal surface of the brain. This structure is light sensitive and secretes melatonin when exposed to prolonged darkness.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000002 "relationship loss: part_of pineal complex (TAO:0001359)[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.