CL:0002565

Name:	iris pigment epithelial cell
Namespace:	FANTOM
Definition:	"A pigment cell located in the epithelium of the iris." [GOC:tfm]
Created by:	tmeehan
Creation date:	2011-03-01T05:28:52Z

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0000066(epithelial cell),CL:0000342(pigment cell (sensu Vertebrata))
part_of:	UBERON:0002506(iris epithelium)

Children

derives from:	FF:0000081 (human iris pigment epithelial cell sample)

Ontology Tree: Loaded from BioPortal

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FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 11530-119I9 (Iris Pigment Epithelial Cells, donor1)
• 11610-120I8
• 11691-122I8

Mouse (Mus musculus)

• 11530-119I9 (Iris Pigment Epithelial Cells, donor1)
• 11610-120I8
• 11691-122I8

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002565 (iris pigment epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
9.37e-99	FFCP PHASE2:Hg19::chr15:71583868..71583874,-	p@chr15:71583868..71583874, -
9.37e-99	FFCP PHASE1:Hg19::chr15:71583868..71583874,-	p@chr15:71583868..71583874, -
1.23e-66	FFCP PHASE2:Hg19::chr5:78112479..78112482,+	p@chr5:78112479..78112482, +
1.23e-66	FFCP PHASE1:Hg19::chr5:78112479..78112482,+	p@chr5:78112479..78112482, +
2.39e-66	FFCP PHASE2:Hg19::chr15:74495062..74495063,-	p13@STRA6
2.39e-66	FFCP PHASE1:Hg19::chr15:74495062..74495063,-	p13@STRA6
4.66e-66	FFCP PHASE1:Hg19::chr22:50667406..50667412,+	p@chr22:50667406..50667412, +
4.66e-66	FFCP PHASE2:Hg19::chr22:50667406..50667412,+	p@chr22:50667406..50667412, +
1.46e-50	FFCP PHASE2:Hg19::chr8:53853688..53853698,-	p3@BC033145
1.46e-50	FFCP PHASE1:Hg19::chr8:53853688..53853698,-	p3@BC033145
2.42e-50	FFCP PHASE1:Hg19::chr7:115723897..115723915,-	p@chr7:115723897..115723915, -
2.42e-50	FFCP PHASE2:Hg19::chr7:115723897..115723915,-	p@chr7:115723897..115723915, -
6.58e-50	FFCP PHASE2:Hg19::chr14:100847969..100847980,+	p6@WDR25
6.58e-50	FFCP PHASE1:Hg19::chr14:100847969..100847980,+	p6@WDR25
6.62e-41	FFCP PHASE1:Hg19::chr7:131803806..131803815,+	p@chr7:131803806..131803815, +
6.62e-41	FFCP PHASE1:Hg19::chr2:35680607..35680613,-	p@chr2:35680607..35680613, -
6.62e-41	FFCP PHASE2:Hg19::chr2:35680607..35680613,-	p@chr2:35680607..35680613, -
6.62e-41	FFCP PHASE2:Hg19::chr7:131803806..131803815,+	p@chr7:131803806..131803815, +
9.91e-41	FFCP PHASE1:Hg19::chr7:115723925..115723935,-	p@chr7:115723925..115723935, -
9.91e-41	FFCP PHASE2:Hg19::chr7:115723925..115723935,-	p@chr7:115723925..115723935, -
9.91e-41	FFCP PHASE1:Hg19::chrX:106198807..106198826,-	p@chrX:106198807..106198826, -
9.91e-41	FFCP PHASE2:Hg19::chrX:106198807..106198826,-	p@chrX:106198807..106198826, -
1.48e-40	FFCP PHASE2:Hg19::chr5:34728676..34728679,+	p26@RAI14
1.48e-40	FFCP PHASE1:Hg19::chr5:34728676..34728679,+	p26@RAI14
2.21e-40	FFCP PHASE2:Hg19::chr15:41062022..41062028,+	p3@C15orf62
2.21e-40	FFCP PHASE1:Hg19::chr15:41062022..41062028,+	p3@C15orf62
3.3e-40	FFCP PHASE1:Hg19::chr4:88447806..88447810,+	p@chr4:88447806..88447810, +
3.3e-40	FFCP PHASE2:Hg19::chr4:88447806..88447810,+	p@chr4:88447806..88447810, +
3.3e-40	FFCP PHASE1:Hg19::chr1:94583454..94583465,-	p@chr1:94583454..94583465, -
3.3e-40	FFCP PHASE2:Hg19::chr1:94583454..94583465,-	p@chr1:94583454..94583465, -
3.3e-40	FFCP PHASE1:Hg19::chr16:80552480..80552487,-	p@chr16:80552480..80552487, -
3.3e-40	FFCP PHASE2:Hg19::chr16:80552480..80552487,-	p@chr16:80552480..80552487, -
3.3e-40	FFCP PHASE1:Hg19::chr3:98671855..98671858,+	p@chr3:98671855..98671858, +
3.3e-40	FFCP PHASE2:Hg19::chr3:98671855..98671858,+	p@chr3:98671855..98671858, +
2.58e-34	FFCP PHASE1:Hg19::chr11:31667372..31667383,-	p@chr11:31667372..31667383, -
2.58e-34	FFCP PHASE2:Hg19::chr11:31667372..31667383,-	p@chr11:31667372..31667383, -
2.58e-34	FFCP PHASE1:Hg19::chr3:98672197..98672201,+	p@chr3:98672197..98672201, +
2.58e-34	FFCP PHASE2:Hg19::chr3:98672197..98672201,+	p@chr3:98672197..98672201, +
3.61e-34	FFCP PHASE1:Hg19::chr15:69339407..69339410,+	p3@NOX5
3.61e-34	FFCP PHASE2:Hg19::chr15:69339407..69339410,+	p3@NOX5
7.06e-34	FFCP PHASE1:Hg19::chr14:85705824..85705844,-	p1@ENST00000556016
7.06e-34	FFCP PHASE1:Hg19::chr14:61929802..61929817,+	p35@PRKCH
7.06e-34	FFCP PHASE2:Hg19::chr14:85705824..85705844,-	p1@ENST00000556016
7.06e-34	FFCP PHASE2:Hg19::chr14:61929802..61929817,+	p35@PRKCH
7.06e-34	FFCP PHASE1:Hg19::chr1:8938123..8938135,-	p3@ENO1-IT1
7.06e-34	FFCP PHASE2:Hg19::chr1:8938123..8938135,-	p3@ENO1-IT1
7.48e-30	FFCP PHASE1:Hg19::chr8:53853672..53853682,-	p1@BC033145
7.48e-30	FFCP PHASE2:Hg19::chr8:53853672..53853682,-	p1@BC033145
9.99e-30	FFCP PHASE1:Hg19::chr9:75489043..75489052,-	p1@ENST00000453787
9.99e-30	FFCP PHASE2:Hg19::chr9:75489043..75489052,-	p1@ENST00000453787
1.33e-29	FFCP PHASE1:Hg19::chr7:43417422..43417435,+	p16@HECW1
1.33e-29	FFCP PHASE2:Hg19::chr7:43417422..43417435,+	p16@HECW1
2.37e-29	FFCP PHASE1:Hg19::chr21:16374688..16374703,-	p6@NRIP1
2.37e-29	FFCP PHASE2:Hg19::chr21:16374688..16374703,-	p6@NRIP1
3.16e-29	FFCP PHASE1:Hg19::chr10:91043389..91043400,+	p3@ENST00000444849
3.16e-29	FFCP PHASE1:Hg19::chr7:151433200..151433217,-	p31@PRKAG2
3.16e-29	FFCP PHASE2:Hg19::chr10:91043389..91043400,+	p3@ENST00000444849
3.16e-29	FFCP PHASE2:Hg19::chr7:151433200..151433217,-	p31@PRKAG2
4.2e-29	FFCP PHASE1:Hg19::chr12:13025302..13025313,+	p@chr12:13025302..13025313, +
4.2e-29	FFCP PHASE2:Hg19::chr12:13025302..13025313,+	p@chr12:13025302..13025313, +
5.93e-26	FFCP PHASE2:Hg19::chr6:125540724..125540736,+	p12@TPD52L1
5.93e-26	FFCP PHASE1:Hg19::chr6:125540724..125540736,+	p12@TPD52L1
9.79e-26	FFCP PHASE1:Hg19::chr21:41160614..41160621,+	p@chr21:41160614..41160621, +
9.79e-26	FFCP PHASE2:Hg19::chr21:41160614..41160621,+	p@chr21:41160614..41160621, +
2.1e-23	FFCP PHASE1:Hg19::chr14:61929948..61929975,+	p20@PRKCH
2.1e-23	FFCP PHASE2:Hg19::chr14:61929948..61929975,+	p20@PRKCH
4.1e-23	FFCP PHASE1:Hg19::chr2:16804394..16804406,-	p6@FAM49A
4.1e-23	FFCP PHASE2:Hg19::chr2:16804394..16804406,-	p6@FAM49A
1.88e-21	FFCP PHASE2:Hg19::chr3:55002159..55002164,+	p@chr3:55002159..55002164, +
1.88e-21	FFCP PHASE1:Hg19::chr3:55002159..55002164,+	p@chr3:55002159..55002164, +
4.22e-21	FFCP PHASE1:Hg19::chr21:16374660..16374679,-	p4@NRIP1
4.22e-21	FFCP PHASE2:Hg19::chr21:16374660..16374679,-	p4@NRIP1
6.31e-21	FFCP PHASE2:Hg19::chr10:91043499..91043510,+	p2@ENST00000354541
6.31e-21	FFCP PHASE1:Hg19::chr8:145011875..145011879,+	p@chr8:145011875..145011879, +
6.31e-21	FFCP PHASE1:Hg19::chr10:91043499..91043510,+	p2@ENST00000354541
6.31e-21	FFCP PHASE2:Hg19::chr8:145011875..145011879,+	p@chr8:145011875..145011879, +
7.72e-21	FFCP PHASE1:Hg19::chr11:31014065..31014073,-	p1@DCDC5
7.72e-21	FFCP PHASE1:Hg19::chr8:124692287..124692298,+	p@chr8:124692287..124692298, +
7.72e-21	FFCP PHASE2:Hg19::chr8:124692287..124692298,+	p@chr8:124692287..124692298, +
7.72e-21	FFCP PHASE2:Hg19::chr15:67524744..67524745,+	p1@ENST00000497294
7.72e-21	FFCP PHASE2:Hg19::chr11:31014065..31014073,-	p1@DCDC5
7.72e-21	FFCP PHASE1:Hg19::chr15:67524744..67524745,+	p1@ENST00000497294
9.43e-21	FFCP PHASE2:Hg19::chr3:150690508..150690520,-	p1@CLRN1
9.43e-21	FFCP PHASE1:Hg19::chr3:150690508..150690520,-	p1@CLRN1
1.3e-19	FFCP PHASE1:Hg19::chr14:87636652..87636657,-	p@chr14:87636652..87636657, -
1.3e-19	FFCP PHASE2:Hg19::chr14:87636652..87636657,-	p@chr14:87636652..87636657, -
2.25e-19	FFCP PHASE1:Hg19::chr14:61929781..61929801,+	p27@PRKCH
2.25e-19	FFCP PHASE2:Hg19::chr14:61929781..61929801,+	p27@PRKCH
3.25e-19	FFCP PHASE1:Hg19::chrX:106243285..106243290,-	p8@MORC4
3.25e-19	FFCP PHASE2:Hg19::chrX:106243285..106243290,-	p8@MORC4
3.25e-19	FFCP PHASE1:Hg19::chr3:147131290..147131301,+	p@chr3:147131290..147131301, +
3.25e-19	FFCP PHASE2:Hg19::chr3:147131290..147131301,+	p@chr3:147131290..147131301, +
3.91e-19	FFCP PHASE2:Hg19::chr14:62037117..62037132,+	p7@FLJ22447
3.91e-19	FFCP PHASE1:Hg19::chr14:62037117..62037132,+	p7@FLJ22447
4.44e-18	FFCP PHASE1:Hg19::chr4:150666211..150666212,+	p@chr4:150666211..150666212, +
4.44e-18	FFCP PHASE2:Hg19::chr4:150666211..150666212,+	p@chr4:150666211..150666212, +
5.26e-18	FFCP PHASE1:Hg19::chr1:29586692..29586705,+	p7@PTPRU
5.26e-18	FFCP PHASE2:Hg19::chr1:29586692..29586705,+	p7@PTPRU
6.23e-18	FFCP PHASE1:Hg19::chr5:138852090..138852095,+	p@chr5:138852090..138852095, +
6.23e-18	FFCP PHASE2:Hg19::chr5:138852090..138852095,+	p@chr5:138852090..138852095, +

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