Personal tools

UBERON:0002005

From FANTOM5_SSTAR

Revision as of 17:23, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:enteric nervous system
Namespace:FANTOM
Definition:"The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gall bladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation[GO]." [Wikipedia:Enteric_nervous_system]
Xrefs:
links:

BTO:0002506
EFO:0000895
EHDAA2:0004202
EMAPA:26922
FMA:66070
GAID:799
MA:0000222
MAT:0000102
MESH:A.08.800.050.150
MIAA:0000102
NIF_GrossAnatomy:birnlex_1166
TAO:0001155

ZFA:0001155
Synonyms: "PNS - enteric" EXACT []
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_66070-MA_0000222-MIAA_0000102-ZFA_0001155
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002410(autonomic nervous system),UBERON:0010313(neural crest-derived structure)
develops_from:UBERON:0005428(vagal neural crest)
part_of:UBERON:0002410(autonomic nervous system)



Children

derives from:FF:0011142 (mouse neurospheres - enteric neuron derived sample)
part of:CL:0002607 (enteric neural crest cell),FF:0011142 (mouse neurospheres - enteric neuron derived sample),FF:11810-124E1 (neurospheres - enteric neuron derived, biol_rep1),FF:11811-124E2 (neurospheres - enteric neuron derived, biol_rep2),FF:11812-124E3 (neurospheres - enteric neuron derived, biol_rep3)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

  • 11810-124E1 (neurospheres - enteric neuron derived, biol_rep1)
  • 11811-124E2 (neurospheres - enteric neuron derived, biol_rep2)
  • 11812-124E3 (neurospheres - enteric neuron derived, biol_rep3)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002005 (enteric nervous system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE1:Mm9::chr6:52158594..52158603,-#_012b9a01d623ffde182cdfa1a5080886p@chr6:52158594..52158603, -
1.58e-86FFCP PHASE2:Mm9::chr6:52158594..52158603,-#_012b9a01d623ffde182cdfa1a5080886p@chr6:52158594..52158603, -
6.04e-65FFCP PHASE2:Mm9::chr4:152858080..152858084,-#_88859c986b2138066a104c548fcef4c9p@chr4:152858080..152858084, -
6.04e-65FFCP PHASE1:Mm9::chr4:152858080..152858084,-#_88859c986b2138066a104c548fcef4c9p@chr4:152858080..152858084, -
3.28e-58FFCP PHASE2:Mm9::chr7:143239748..143239753,+#_f9f43344fd081df21e6621ccb3c3c6c9p@chr7:143239748..143239753, +
3.28e-58FFCP PHASE1:Mm9::chr7:143239748..143239753,+#_f9f43344fd081df21e6621ccb3c3c6c9p@chr7:143239748..143239753, +
1.18e-44FFCP PHASE1:Mm9::chr1:88008549..88008559,-#_599636474959367d7fd879b9efdc5cb0p4@Htr2b
1.18e-44FFCP PHASE2:Mm9::chr1:88008549..88008559,-#_599636474959367d7fd879b9efdc5cb0p4@Htr2b
3.27e-44FFCP PHASE1:Mm9::chr2:74583733..74583738,+#_17da3f3908cfab8f1d828fbde29ac56cp13@Hoxd3
3.27e-44FFCP PHASE2:Mm9::chr2:74583733..74583738,+#_17da3f3908cfab8f1d828fbde29ac56cp13@Hoxd3
4.58e-44FFCP PHASE2:Mm9::chr13:96388617..96388624,-#_dd1436596c73a9fef2392fc7609745a3p4@F2r
4.58e-44FFCP PHASE1:Mm9::chr13:96388617..96388624,-#_dd1436596c73a9fef2392fc7609745a3p4@F2r
8.97e-44FFCP PHASE2:Mm9::chr5:88358803..88358820,+#_37ea4e6ce14460e28c231fc723cfe03fp@chr5:88358803..88358820, +
8.97e-44FFCP PHASE1:Mm9::chr5:88358803..88358820,+#_37ea4e6ce14460e28c231fc723cfe03fp@chr5:88358803..88358820, +
4.15e-39FFCP PHASE1:Mm9::chr11:4397590..4397595,-#_413c77a66219bcac9b250627912de957p@chr11:4397590..4397595, -
4.15e-39FFCP PHASE2:Mm9::chr11:4397590..4397595,-#_413c77a66219bcac9b250627912de957p@chr11:4397590..4397595, -
1.17e-38FFCP PHASE2:Mm9::chr9:35352286..35352290,-#_7e7e380f0d84ab2f280f1f64af1da9fdp@chr9:35352286..35352290, -
1.17e-38FFCP PHASE1:Mm9::chr9:35352286..35352290,-#_7e7e380f0d84ab2f280f1f64af1da9fdp@chr9:35352286..35352290, -
1.56e-38FFCP PHASE2:Mm9::chr15:102928215..102928218,-#_84e171eac92365c329fbc8acac79df52p@chr15:102928215..102928218, -
1.56e-38FFCP PHASE1:Mm9::chr15:102928215..102928218,-#_84e171eac92365c329fbc8acac79df52p@chr15:102928215..102928218, -
3.73e-38FFCP PHASE2:Mm9::chr11:96164868..96164875,+#_2662a9359233d407c523590c22abb451p5@Hoxb5
3.73e-38FFCP PHASE1:Mm9::chr11:96164868..96164875,+#_2662a9359233d407c523590c22abb451p5@Hoxb5
4.98e-38FFCP PHASE2:Mm9::chr11:96176093..96176104,+#_e85737b0e87acc55b1228e80b32ee89fp@chr11:96176093..96176104, +
4.98e-38FFCP PHASE1:Mm9::chr11:96176093..96176104,+#_e85737b0e87acc55b1228e80b32ee89fp@chr11:96176093..96176104, +
3.67e-34FFCP PHASE1:Mm9::chr8:11952680..11952690,+#_03683b2f4076f489e10702d886ec09f9p@chr8:11952680..11952690, +
3.67e-34FFCP PHASE2:Mm9::chr8:11952680..11952690,+#_03683b2f4076f489e10702d886ec09f9p@chr8:11952680..11952690, +
4.74e-34FFCP PHASE2:Mm9::chr16:5855821..5855836,+#_9167ea41516eb48549c68194ada9b1dfp@chr16:5855821..5855836, +
4.74e-34FFCP PHASE2:Mm9::chr10:90644180..90644195,-#_9167ea41516eb48549c68194ada9b1dfp@chr10:90644180..90644195, -
4.74e-34FFCP PHASE1:Mm9::chr16:5855821..5855836,+#_9167ea41516eb48549c68194ada9b1dfp@chr16:5855821..5855836, +
4.74e-34FFCP PHASE1:Mm9::chr10:90644180..90644195,-#_9167ea41516eb48549c68194ada9b1dfp@chr10:90644180..90644195, -
6.12e-34FFCP PHASE2:Mm9::chr2:31305411..31305419,+#_a2b2e4c318a2713249a1754ebea6bccdp@chr2:31305411..31305419, +
6.12e-34FFCP PHASE1:Mm9::chr2:31305411..31305419,+#_a2b2e4c318a2713249a1754ebea6bccdp@chr2:31305411..31305419, +
1.69e-33FFCP PHASE2:Mm9::chr16:5855860..5855872,+#_fd89d5aef5b5a82548966ac4c360ecb6p@chr16:5855860..5855872, +
1.69e-33FFCP PHASE1:Mm9::chr16:5855860..5855872,+#_fd89d5aef5b5a82548966ac4c360ecb6p@chr16:5855860..5855872, +
9.86e-33FFCP PHASE1:Mm9::chr12:88020400..88020411,+#_3ee24fe664a963e00f7679923fc4da5fp@chr12:88020400..88020411, +
9.86e-33FFCP PHASE2:Mm9::chr12:88020400..88020411,+#_3ee24fe664a963e00f7679923fc4da5fp@chr12:88020400..88020411, +
1.16e-30FFCP PHASE2:Mm9::chr6:52158693..52158704,-#_698ad203410cd0f0d6e75036da807e64p3@Hoxa6
1.16e-30FFCP PHASE1:Mm9::chr6:52158693..52158704,-#_698ad203410cd0f0d6e75036da807e64p3@Hoxa6
4.54e-30FFCP PHASE1:Mm9::chr11:113795301..113795315,+#_e80522b4d47b10205fb60e57e7a5bf0ep@chr11:113795301..113795315, +
4.54e-30FFCP PHASE2:Mm9::chr11:113795301..113795315,+#_e80522b4d47b10205fb60e57e7a5bf0ep@chr11:113795301..113795315, +
4.54e-30FFCP PHASE1:Mm9::chr11:96168366..96168369,+#_e80522b4d47b10205fb60e57e7a5bf0ep@chr11:96168366..96168369, +
4.54e-30FFCP PHASE2:Mm9::chr11:96168366..96168369,+#_e80522b4d47b10205fb60e57e7a5bf0ep@chr11:96168366..96168369, +
5.61e-30FFCP PHASE2:Mm9::chr14:20570183..20570190,+#_43fe6afdaf6d7f9fbe306e19e79a6743p3@Nid2
5.61e-30FFCP PHASE1:Mm9::chr14:20570183..20570190,+#_43fe6afdaf6d7f9fbe306e19e79a6743p3@Nid2
5.7e-30FFCP PHASE1:Mm9::chr8:11782453..11782481,+#_c876bf41fc0822194c813705e45aa9dep25@Arhgef7
5.7e-30FFCP PHASE2:Mm9::chr8:11782453..11782481,+#_c876bf41fc0822194c813705e45aa9dep25@Arhgef7
7.14e-30FFCP PHASE2:Mm9::chr7:98820891..98820900,+#_0105b79b8d2291e714c8b2731853470fp34@Dlg2
7.14e-30FFCP PHASE1:Mm9::chr7:98820891..98820900,+#_0105b79b8d2291e714c8b2731853470fp34@Dlg2
1.12e-29FFCP PHASE1:Mm9::chr6:118116455..118116458,-#_f0df4e5cdf4be858a3c95ea7d3587db5p@chr6:118116455..118116458, -
1.12e-29FFCP PHASE2:Mm9::chr6:118116455..118116458,-#_f0df4e5cdf4be858a3c95ea7d3587db5p@chr6:118116455..118116458, -
1.4e-29FFCP PHASE1:Mm9::chr2:119624214..119624225,+#_c0c4afafacf9bb9040571c278b848e6ep7@Tyro3
1.4e-29FFCP PHASE2:Mm9::chr2:119624214..119624225,+#_c0c4afafacf9bb9040571c278b848e6ep7@Tyro3
1.54e-29FFCP PHASE2:Mm9::chr1:88007341..88007350,-#_33d1f5789986de3f2bf40af115a3eda5p7@Htr2b
1.54e-29FFCP PHASE1:Mm9::chr1:88007341..88007350,-#_33d1f5789986de3f2bf40af115a3eda5p7@Htr2b
1.54e-29FFCP PHASE2:Mm9::chr5:88358878..88358890,+#_33d1f5789986de3f2bf40af115a3eda5p@chr5:88358878..88358890, +
1.54e-29FFCP PHASE1:Mm9::chr5:88358878..88358890,+#_33d1f5789986de3f2bf40af115a3eda5p@chr5:88358878..88358890, +
2.19e-29FFCP PHASE2:Mm9::chr15:90848413..90848436,-#_83c8989167fdb169dfa34b1a36d33a29p@chr15:90848413..90848436, -
2.19e-29FFCP PHASE1:Mm9::chr15:90848413..90848436,-#_83c8989167fdb169dfa34b1a36d33a29p@chr15:90848413..90848436, -
3.42e-29FFCP PHASE1:Mm9::chr9:20777404..20777418,+#_c49696c8d43b2259e183ccb439bff3f1p@chr9:20777404..20777418, +
3.42e-29FFCP PHASE2:Mm9::chr9:20777404..20777418,+#_c49696c8d43b2259e183ccb439bff3f1p@chr9:20777404..20777418, +
7.38e-28FFCP PHASE2:Mm9::chr6:52134126..52134150,-#_02e5e21f3b1f4877b1550b610b5d9a44p3@Hoxa3
7.38e-28FFCP PHASE1:Mm9::chr6:52134126..52134150,-#_02e5e21f3b1f4877b1550b610b5d9a44p3@Hoxa3
9.07e-28FFCP PHASE2:Mm9::chr11:106874215..106874219,+#_4602299eafbbce13621de2283abb8042p@chr11:106874215..106874219, +
9.07e-28FFCP PHASE1:Mm9::chr11:106874215..106874219,+#_4602299eafbbce13621de2283abb8042p@chr11:106874215..106874219, +
1.11e-27FFCP PHASE2:Mm9::chr5:46030754..46030764,-#_b688bc9f3149fb63bbe28a05f6ea19dcp9@Fam184b
1.11e-27FFCP PHASE1:Mm9::chr5:46030754..46030764,-#_b688bc9f3149fb63bbe28a05f6ea19dcp9@Fam184b
1.37e-27FFCP PHASE1:Mm9::chr11:96175972..96175978,+#_280deda799bbd22d7af67427ee67159dp@chr11:96175972..96175978, +
1.37e-27FFCP PHASE2:Mm9::chr11:96175972..96175978,+#_280deda799bbd22d7af67427ee67159dp@chr11:96175972..96175978, +
2.06e-27FFCP PHASE2:Mm9::chr5:67486110..67486118,-#_5ae025804725b1e08f953a4dc80e86dap@chr5:67486110..67486118, -
2.06e-27FFCP PHASE1:Mm9::chr5:67486110..67486118,-#_5ae025804725b1e08f953a4dc80e86dap@chr5:67486110..67486118, -
5.7e-27FFCP PHASE2:Mm9::chr1:65358027..65358031,+#_1ff5789694c06320350a9c4412692d87p1@Pth2r
5.7e-27FFCP PHASE1:Mm9::chr1:65358027..65358031,+#_1ff5789694c06320350a9c4412692d87p1@Pth2r
8.55e-27FFCP PHASE2:Mm9::chr3:59108872..59108875,+#_4936cedf4c09a54d19efd11bbdc3b29fp@chr3:59108872..59108875, +
8.55e-27FFCP PHASE1:Mm9::chr3:59108872..59108875,+#_4936cedf4c09a54d19efd11bbdc3b29fp@chr3:59108872..59108875, +
3.49e-26FFCP PHASE2:Mm9::chr1:94648758..94648763,+#_701a70d12c86aa6e63a865c1b34faa28p@chr1:94648758..94648763, +
3.49e-26FFCP PHASE1:Mm9::chr1:94648758..94648763,+#_701a70d12c86aa6e63a865c1b34faa28p@chr1:94648758..94648763, +
5.19e-26FFCP PHASE1:Mm9::chr1:112856387..112856393,-#_14eaf8a38549b0814057eb9588b57941p@chr1:112856387..112856393, -
5.19e-26FFCP PHASE2:Mm9::chr1:112856387..112856393,-#_14eaf8a38549b0814057eb9588b57941p@chr1:112856387..112856393, -
1.46e-25FFCP PHASE2:Mm9::chr11:96164887..96164894,+#_873f20f0989f8ce99cb35ceaeafcdde8p4@Hoxb5
1.46e-25FFCP PHASE1:Mm9::chr11:96164887..96164894,+#_873f20f0989f8ce99cb35ceaeafcdde8p4@Hoxb5
4.47e-25FFCP PHASE2:Mm9::chr2:67492047..67492052,+#_bfa2455c968150b10880961775292cc6p@chr2:67492047..67492052, +
4.47e-25FFCP PHASE1:Mm9::chr2:67492047..67492052,+#_bfa2455c968150b10880961775292cc6p@chr2:67492047..67492052, +
6.49e-25FFCP PHASE2:Mm9::chr2:74583741..74583750,+#_77e9c6c832a6fdd00ca64e462919236ap10@Hoxd3
6.49e-25FFCP PHASE1:Mm9::chr2:74583741..74583750,+#_77e9c6c832a6fdd00ca64e462919236ap10@Hoxd3
7.81e-25FFCP PHASE1:Mm9::chr2:119586145..119586157,-#_fd2e05ae2a63b6bebecc5a81bc0f3181p2@Ltk
7.81e-25FFCP PHASE2:Mm9::chr2:119586145..119586157,-#_fd2e05ae2a63b6bebecc5a81bc0f3181p2@Ltk
1.13e-24FFCP PHASE2:Mm9::chr11:96165338..96165355,+#_c3ba9f77e38087eb02c6c0ead384118dp@chr11:96165338..96165355, +
1.13e-24FFCP PHASE1:Mm9::chr11:96165338..96165355,+#_c3ba9f77e38087eb02c6c0ead384118dp@chr11:96165338..96165355, +
1.63e-24FFCP PHASE1:Mm9::chr7:38151719..38151721,-#_dbed92c128a8506a5d84af74f1eca332p@chr7:38151719..38151721, -
1.63e-24FFCP PHASE2:Mm9::chr7:38151719..38151721,-#_dbed92c128a8506a5d84af74f1eca332p@chr7:38151719..38151721, -
4.9e-24FFCP PHASE2:Mm9::chr12:100139521..100139532,-#_840ddd69ec8e3d456a69c835968704fbp4@Eml5
4.9e-24FFCP PHASE1:Mm9::chr12:100139521..100139532,-#_840ddd69ec8e3d456a69c835968704fbp4@Eml5
5.11e-24FFCP PHASE2:Mm9::chr8:26610056..26610057,-#_d0972768e04c3503b5253dcf0ce3d86bp@chr8:26610056..26610057, -
5.11e-24FFCP PHASE1:Mm9::chr8:26610056..26610057,-#_d0972768e04c3503b5253dcf0ce3d86bp@chr8:26610056..26610057, -
6.68e-24FFCP PHASE1:Mm9::chr5:88358947..88358973,+#_e8fa1943fa0d100b51268deed34a032bp@chr5:88358947..88358973, +
6.68e-24FFCP PHASE2:Mm9::chr5:88358947..88358973,+#_e8fa1943fa0d100b51268deed34a032bp@chr5:88358947..88358973, +
1.19e-23FFCP PHASE1:Mm9::chr8:11913012..11913024,+#_4ecd269fa4cf76e163a10919aa144d68p@chr8:11913012..11913024, +
1.19e-23FFCP PHASE2:Mm9::chr8:11913012..11913024,+#_4ecd269fa4cf76e163a10919aa144d68p@chr8:11913012..11913024, +
1.21e-23FFCP PHASE2:Mm9::chr9:42209681..42209703,-#_10fb6a90687a41ec05a7a79d082bf8b1p@chr9:42209681..42209703, -
1.21e-23FFCP PHASE1:Mm9::chr9:42209681..42209703,-#_10fb6a90687a41ec05a7a79d082bf8b1p@chr9:42209681..42209703, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0002005&oldid=3277339"