Personal tools

UBERON:0004852

From FANTOM5_SSTAR

Revision as of 17:48, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:cardiovascular system endothelium
Namespace:FANTOM
Definition:"An endothelium that is part of the cardiovascular system." [UBERON:cjm]
Xrefs:
links:

BTO:0001853
GAID:519
MA:0000717
MESH:A.07.231.330
TAO:0002171
VHOG:0001217
XAO:0000356

ZFA:0001639
Comments:consider merging with 'endothelium'
Subset: vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001986(endothelium)
part_of:UBERON:0004535(cardiovascular system)



Children

is a:UBERON:0004638 (blood vessel endothelium),UBERON:0004700 (arterial system endothelium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004852 (cardiovascular system endothelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.63e-150FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_6f0b494069257d16dd754dae5096b295p@chr18:33046982..33046991, -
8.63e-150FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_6f0b494069257d16dd754dae5096b295p@chr18:33046982..33046991, -
2.4e-126FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_c646298dff10679d96bdc95e7fa09383p1@MIR216A
2.4e-126FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_c646298dff10679d96bdc95e7fa09383p1@MIR216A
1.75e-121FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_8726001fa91ddfda87c26fd3ab07d3dep@chr6:78171774..78171792, +
1.75e-121FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_8726001fa91ddfda87c26fd3ab07d3dep@chr6:78171774..78171792, +
2.8e-121FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_0a16803a73003f02ca4dc6cf16c3ea7fp@chr18:33047157..33047168, -
2.8e-121FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_0a16803a73003f02ca4dc6cf16c3ea7fp@chr18:33047157..33047168, -
2.32e-119FFCP PHASE2:Hg19::chr7:139741849..139741879,-#_da546482a4b120b5c6b578c399349544p12@PARP12
2.32e-119FFCP PHASE1:Hg19::chr7:139741849..139741879,-#_da546482a4b120b5c6b578c399349544p12@PARP12
3.95e-117FFCP PHASE2:Hg19::chr7:139741594..139741615,-#_6836bd935747e0057f607ff333972675p5@PARP12
3.95e-117FFCP PHASE1:Hg19::chr7:139741594..139741615,-#_6836bd935747e0057f607ff333972675p5@PARP12
1.12e-116FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_1e72efd6928e501eb736fe8deefdc6b4p12@KSR2
1.12e-116FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_1e72efd6928e501eb736fe8deefdc6b4p12@KSR2
4.37e-116FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_b21c1f45d923cb9eccc6b93e829c6817p@chr3:43538305..43538325, -
4.37e-116FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_b21c1f45d923cb9eccc6b93e829c6817p@chr3:43538305..43538325, -
6.53e-113FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_aec721f774192109678a0fa24b6d2016p@chrX:71299684..71299699, +
6.53e-113FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_aec721f774192109678a0fa24b6d2016p@chrX:71299684..71299699, +
2.12e-108FFCP PHASE1:Hg19::chr10:50153703..50153720,+#_cb23de68638a0a8ddf5c6399889da907p7@WDFY4
2.12e-108FFCP PHASE2:Hg19::chr10:50153703..50153720,+#_cb23de68638a0a8ddf5c6399889da907p7@WDFY4
3.85e-107FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_5c53bfca2c09e4ea81f1eeb25d873e45p6@WDFY4
3.85e-107FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_5c53bfca2c09e4ea81f1eeb25d873e45p6@WDFY4
3.44e-106FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_1d50b80e83758105bcb492861dd91140p2@BMX
3.44e-106FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_1d50b80e83758105bcb492861dd91140p2@BMX
1.68e-105FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_ea8a11939929622d0e8fbe7290970deap@chr6:3753188..3753192, -
1.68e-105FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_ea8a11939929622d0e8fbe7290970deap@chr6:3753188..3753192, -
3.71e-103FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_0a8dd14f2d2e89ffa28e84c379bb3fb2p1@ENST00000513158
3.71e-103FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_0a8dd14f2d2e89ffa28e84c379bb3fb2p1@ENST00000513158
8.1e-103FFCP PHASE2:Hg19::chr10:99655692..99655725,-#_ab5d08b683b78a36dcf4d01fb20274a9p@chr10:99655692..99655725, -
8.1e-103FFCP PHASE1:Hg19::chr10:99655692..99655725,-#_ab5d08b683b78a36dcf4d01fb20274a9p@chr10:99655692..99655725, -
1.53e-102FFCP PHASE2:Hg19::chr7:150329732..150329739,-#_7e9280766ea4b6fc44947bf27a99b09cp8@GIMAP6
1.53e-102FFCP PHASE1:Hg19::chr7:150329732..150329739,-#_7e9280766ea4b6fc44947bf27a99b09cp8@GIMAP6
3.68e-102FFCP PHASE2:Hg19::chr14:75469820..75469826,+#_be6671218bbd4c9b9cc61272ff559de0p4@EIF2B2
3.68e-102FFCP PHASE1:Hg19::chr14:75469820..75469826,+#_be6671218bbd4c9b9cc61272ff559de0p4@EIF2B2
4.84e-102FFCP PHASE2:Hg19::chr6:78171746..78171769,+#_03c08ee6eff7ec4d9af49762613bb67dp@chr6:78171746..78171769, +
4.84e-102FFCP PHASE1:Hg19::chr6:78171746..78171769,+#_03c08ee6eff7ec4d9af49762613bb67dp@chr6:78171746..78171769, +
2.83e-101FFCP PHASE2:Hg19::chr6:148664333..148664338,-#_61a141dd3d92afd4b2e8706d8f593b68p@chr6:148664333..148664338, -
2.83e-101FFCP PHASE1:Hg19::chr6:148664333..148664338,-#_61a141dd3d92afd4b2e8706d8f593b68p@chr6:148664333..148664338, -
1.76e-99FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_6e8c20915865ce437a9319c2c8e55d74p5@CLEC14A
1.76e-99FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_6e8c20915865ce437a9319c2c8e55d74p5@CLEC14A
5.12e-99FFCP PHASE2:Hg19::chr5:34656634..34656645,+#_7e33928cdbc56fde98059dfa49f4fbd3p15@RAI14
5.12e-99FFCP PHASE1:Hg19::chr5:34656634..34656645,+#_7e33928cdbc56fde98059dfa49f4fbd3p15@RAI14
3.9e-98FFCP PHASE2:Hg19::chr17:62084108..62084111,-#_e85c347079a747415a5805be366e23bdp5@ICAM2
3.9e-98FFCP PHASE1:Hg19::chr17:62084108..62084111,-#_e85c347079a747415a5805be366e23bdp5@ICAM2
1.28e-97FFCP PHASE2:Hg19::chr4:145566874..145566889,+#_c57b3d8ac81a84296ce311a719afe156p15@HHIP
1.28e-97FFCP PHASE1:Hg19::chr4:145566874..145566889,+#_c57b3d8ac81a84296ce311a719afe156p15@HHIP
1.51e-97FFCP PHASE2:Hg19::chr9:139563124..139563129,+#_8feceb4e764704576a4436fe3e35d6f8p@chr9:139563124..139563129, +
1.51e-97FFCP PHASE1:Hg19::chr9:139563124..139563129,+#_8feceb4e764704576a4436fe3e35d6f8p@chr9:139563124..139563129, +
5.66e-97FFCP PHASE2:Hg19::chr7:150690812..150690817,+#_b018b5fcf01714fc66108e1d1227666dp10@NOS3
5.66e-97FFCP PHASE1:Hg19::chr7:150690812..150690817,+#_b018b5fcf01714fc66108e1d1227666dp10@NOS3
1.44e-96FFCP PHASE2:Hg19::chr5:176433333..176433349,-#_f3e086fa748e75189a5f36159d8e11f4p11@UIMC1
1.44e-96FFCP PHASE1:Hg19::chr5:176433333..176433349,-#_f3e086fa748e75189a5f36159d8e11f4p11@UIMC1
3.94e-95FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_c2b0a15e6d826b0d318840101e7d5ad1p6@CLEC14A
3.94e-95FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_c2b0a15e6d826b0d318840101e7d5ad1p6@CLEC14A
4.62e-95FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_a07a49635a82884b26023e42755d0bd3p@chr11:124761247..124761258, -
4.62e-95FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_a07a49635a82884b26023e42755d0bd3p@chr11:124761247..124761258, -
6.81e-95FFCP PHASE2:Hg19::chr1:22264210..22264241,+#_d23aee161f8797a9a4a7e87293a9ce89p@chr1:22264210..22264241, +
6.81e-95FFCP PHASE1:Hg19::chr1:22264210..22264241,+#_d23aee161f8797a9a4a7e87293a9ce89p@chr1:22264210..22264241, +
5.14e-93FFCP PHASE2:Hg19::chr9:139543445..139543462,+#_35e675769a761bc8935d9ff5454dbbedp@chr9:139543445..139543462, +
5.14e-93FFCP PHASE1:Hg19::chr9:139543445..139543462,+#_35e675769a761bc8935d9ff5454dbbedp@chr9:139543445..139543462, +
3.62e-92FFCP PHASE2:Hg19::chr13:32835894..32835907,+#_d0f824be61cc377086cd71ad1ebd6c62p@chr13:32835894..32835907, +
3.62e-92FFCP PHASE1:Hg19::chr13:32835894..32835907,+#_d0f824be61cc377086cd71ad1ebd6c62p@chr13:32835894..32835907, +
6.53e-92FFCP PHASE2:Hg19::chr9:139541134..139541139,+#_ae6ace17dc4695a895c50345eaef308bp@chr9:139541134..139541139, +
6.53e-92FFCP PHASE1:Hg19::chr9:139541134..139541139,+#_ae6ace17dc4695a895c50345eaef308bp@chr9:139541134..139541139, +
8.31e-92FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_f8690e686a91fb0d494f9eb0ab7ed534p@chr12:105863705..105863718, +
8.31e-92FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_f8690e686a91fb0d494f9eb0ab7ed534p@chr12:105863705..105863718, +
1.78e-91FFCP PHASE2:Hg19::chr19:41985048..41985050,-#_c28ae08ba780ed6e1f2dd200dc2f6c71p@chr19:41985048..41985050, -
1.78e-91FFCP PHASE1:Hg19::chr19:41985048..41985050,-#_c28ae08ba780ed6e1f2dd200dc2f6c71p@chr19:41985048..41985050, -
1.27e-90FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_326442fa35a5b0856c4833f03807d4cbp@chr12:105863636..105863650, +
1.27e-90FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_326442fa35a5b0856c4833f03807d4cbp@chr12:105863636..105863650, +
4.84e-90FFCP PHASE2:Hg19::chr16:2220383..2220402,+#_af923a8f1d0215921d97421893f60a00p@chr16:2220383..2220402, +
4.84e-90FFCP PHASE1:Hg19::chr16:2220383..2220402,+#_af923a8f1d0215921d97421893f60a00p@chr16:2220383..2220402, +
4.93e-90FFCP PHASE1:Hg19::chr9:139543390..139543404,+#_7aed0dedb4ba64a8abb7be8950a0a5e5p@chr9:139543390..139543404, +
4.93e-90FFCP PHASE2:Hg19::chr9:139543390..139543404,+#_7aed0dedb4ba64a8abb7be8950a0a5e5p@chr9:139543390..139543404, +
2.05e-88FFCP PHASE1:Hg19::chr10:129785574..129785580,+#_734a61ecfa5c77ea60350b9241601710p14@PTPRE
2.05e-88FFCP PHASE2:Hg19::chr10:129785574..129785580,+#_734a61ecfa5c77ea60350b9241601710p14@PTPRE
2.37e-88FFCP PHASE1:Hg19::chr13:32835912..32835936,+#_3da25df016f3f53b07f2e4ea3b138e51p@chr13:32835912..32835936, +
2.37e-88FFCP PHASE2:Hg19::chr13:32835912..32835936,+#_3da25df016f3f53b07f2e4ea3b138e51p@chr13:32835912..32835936, +
3.48e-88FFCP PHASE2:Hg19::chr6:11607864..11607875,+#_11db171e77859468581ee5f9dcb7b4dcp@chr6:11607864..11607875, +
3.48e-88FFCP PHASE1:Hg19::chr6:11607864..11607875,+#_11db171e77859468581ee5f9dcb7b4dcp@chr6:11607864..11607875, +
8.3e-88FFCP PHASE1:Hg19::chr1:16076122..16076138,-#_bb48624ad8e4cc44d3d64bfe55b2f8f9p1@ENST00000418525
8.3e-88FFCP PHASE2:Hg19::chr1:16076122..16076138,-#_bb48624ad8e4cc44d3d64bfe55b2f8f9p1@ENST00000418525
1.93e-87FFCP PHASE1:Hg19::chr12:96830523..96830532,+#_2760afd7c3855aba3b1d057e66b080bbp@chr12:96830523..96830532, +
1.93e-87FFCP PHASE2:Hg19::chr12:96830523..96830532,+#_2760afd7c3855aba3b1d057e66b080bbp@chr12:96830523..96830532, +
3.38e-87FFCP PHASE1:Hg19::chr12:12491541..12491552,-#_468abfade1cc40a6ac1b52d818f6216bp11@MANSC1
3.38e-87FFCP PHASE2:Hg19::chr12:12491541..12491552,-#_468abfade1cc40a6ac1b52d818f6216bp11@MANSC1
3.45e-85FFCP PHASE2:Hg19::chr18:33047117..33047138,-#_7d5beb3e1088f8d9cecaed14264661f5p@chr18:33047117..33047138, -
3.45e-85FFCP PHASE1:Hg19::chr18:33047117..33047138,-#_7d5beb3e1088f8d9cecaed14264661f5p@chr18:33047117..33047138, -
4.2e-85FFCP PHASE2:Hg19::chr18:33047076..33047099,-#_9b16dacc5c913c279755773fed2d81eap@chr18:33047076..33047099, -
4.2e-85FFCP PHASE1:Hg19::chr18:33047076..33047099,-#_9b16dacc5c913c279755773fed2d81eap@chr18:33047076..33047099, -
1.18e-84FFCP PHASE2:Hg19::chr1:28785607..28785624,+#_d7c8797243db6c1e6d8db20d620408b6p@chr1:28785607..28785624, +
1.18e-84FFCP PHASE1:Hg19::chr1:28785607..28785624,+#_d7c8797243db6c1e6d8db20d620408b6p@chr1:28785607..28785624, +
1.82e-84FFCP PHASE2:Hg19::chr3:58034268..58034295,+#_f1fbf98df016b0f4d325cabc9aea73c4p@chr3:58034268..58034295, +
1.82e-84FFCP PHASE1:Hg19::chr3:58034268..58034295,+#_f1fbf98df016b0f4d325cabc9aea73c4p@chr3:58034268..58034295, +
3.24e-84FFCP PHASE2:Hg19::chr15:39423060..39423066,+#_4bb46b0a98de35af0d0eb39c7fc8eb61p@chr15:39423060..39423066, +
3.24e-84FFCP PHASE1:Hg19::chr15:39423060..39423066,+#_4bb46b0a98de35af0d0eb39c7fc8eb61p@chr15:39423060..39423066, +
1.28e-80FFCP PHASE2:Hg19::chr2:225266779..225266786,-#_d393604aa5e7c445a728a8b20b26672cp4@FAM124B
1.28e-80FFCP PHASE1:Hg19::chr2:225266779..225266786,-#_d393604aa5e7c445a728a8b20b26672cp4@FAM124B
3.03e-80FFCP PHASE2:Hg19::chr17:47287786..47287797,+#_61e56326c30fec3e75abebeae94acb0ap4@ABI3
3.03e-80FFCP PHASE1:Hg19::chr17:47287786..47287797,+#_61e56326c30fec3e75abebeae94acb0ap4@ABI3

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0004852&oldid=3277702"