FFCP PHASE2:Hg19::chr13:74071854..74071871,+
From FANTOM5_SSTAR
Revision as of 17:02, 24 July 2015 by Autoedit (talk | contribs) (Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=NA |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=NA |TSSclassifier=stron...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
| Short description: | p@chr13:74071854..74071871, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr13:74071854..74071871, + |
| Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr13:74071854..74071871+ |
|---|
0
5
10
15
20
25
30
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| transitional epithelial cell | 6.18e-19 | 4 |
| urothelial cell | 6.18e-19 | 4 |
| squamous epithelial cell | 3.41e-10 | 63 |
| acinar cell of salivary gland | 2.63e-07 | 3 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| mammalian vulva | 5.62e-19 | 1 |
| external female genitalia | 5.62e-19 | 1 |
| urothelium | 2.34e-15 | 5 |
| transitional epithelium | 5.76e-13 | 6 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| squamous cell carcinoma | 2.47e-32 | 14 |
| skin squamous cell carcinoma | 1.08e-19 | 1 |
| keratoacanthoma | 1.08e-19 | 1 |
| skin carcinoma | 1.57e-10 | 2 |
| skin cancer | 1.57e-10 | 2 |
| integumentary system cancer | 1.57e-10 | 2 |
Showing 1 to 6 of 6 entries
