FFCP PHASE2:Hg19::chr19:35521342..35521394,+
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Short description: | p1@SCN1B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCN1B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -139bp_to_uc002nxo.1, uc002nxp.2, uc010xsg.1_5end |
EntrezGene: | 6324 |
HGNC: | 10586 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SCN1B |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mesodermal cell | 5.36e-12 | 121 |
endothelial cell | 4.20e-11 | 36 |
lining cell | 6.91e-11 | 58 |
barrier cell | 6.91e-11 | 58 |
meso-epithelial cell | 2.25e-09 | 45 |
endothelial cell of vascular tree | 2.32e-09 | 24 |
blood vessel endothelial cell | 1.53e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.53e-07 | 18 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
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adult organism | 1.19e-32 | 114 |
tube | 1.01e-24 | 192 |
anatomical conduit | 1.30e-24 | 240 |
structure with developmental contribution from neural crest | 1.75e-24 | 132 |
neural tube | 1.76e-23 | 56 |
neural rod | 1.76e-23 | 56 |
future spinal cord | 1.76e-23 | 56 |
neural keel | 1.76e-23 | 56 |
regional part of nervous system | 7.55e-22 | 53 |
regional part of brain | 7.55e-22 | 53 |
Showing 1 to 10 of 78 entries